; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0834 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0834
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPhotosystem II 10 kDa polypeptide, chloroplastic
Genome locationMC10:7053219..7055385
RNA-Seq ExpressionMC10g0834
SyntenyMC10g0834
Gene Ontology termsGO:0010270 - photosystem II oxygen evolving complex assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR006814 - Photosystem II PsbR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147752.1 photosystem II 10 kDa polypeptide, chloroplastic [Cucumis sativus]1.82e-8595.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA GLPSLAR S SFKV ASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_008451826.1 PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Cucumis melo]9.00e-8695.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR SASFKV ASGGKKIKTDKPYGINGSMNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_022136536.1 photosystem II 10 kDa polypeptide, chloroplastic [Momordica charantia]3.40e-90100Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_023553544.1 photosystem II 10 kDa polypeptide, chloroplastic [Cucurbita pepo subsp. pepo]1.28e-8594.2Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEK+A+G+PSLAR S  FKVEASGGKKIKTDKPYGINGSMNLRDG+DASGRKGKGKGVYQ+VDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_038876356.1 photosystem II 10 kDa polypeptide, chloroplastic-like [Benincasa hispida]4.64e-8897.83Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSAKGLPSLAR S  FKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KXH3 Photosystem II 10 kDa polypeptide, chloroplastic8.79e-8695.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA GLPSLAR S SFKV ASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A1S3BSD1 Photosystem II 10 kDa polypeptide, chloroplastic4.36e-8695.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR SASFKV ASGGKKIKTDKPYGINGSMNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A5A7VB86 Photosystem II 10 kDa polypeptide, chloroplastic1.25e-8594.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAAS+MTSVSLKPAPFTVEKSA+GLPSLAR SASFKV ASGGKKIKTDKPYGINGSMNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A5D3CXX1 Photosystem II 10 kDa polypeptide, chloroplastic4.36e-8695.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR SASFKV ASGGKKIKTDKPYGINGSMNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A6J1C3S3 Photosystem II 10 kDa polypeptide, chloroplastic1.64e-90100Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

SwissProt top hitse value%identityAlignment
P06183 Photosystem II 10 kDa polypeptide, chloroplastic1.1e-5582.73Show/hide
Query:  MAASVMTSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM+S+SLKP  FT+EK S KGLPSLAR+S+SFKV ASG KK+KTDKPYGINGSM LRDG+DASGRK KGKGVYQ+VDKYGANVDGYSPIY+T +WS
Subjt:  MAASVMTSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWAVTL G+LAGGALLVYNTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

P27202 Photosystem II 10 kDa polypeptide, chloroplastic1.2e-5279.29Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW
        MAASVM +SV+LKPA FTVEK +A+GLPSL R   SFK+ ASG KKIKTDKP+GINGSM+LRDG+DASGRKGKG GVY++VDKYGANVDGYSPIY+  +W
Subjt:  MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW

Query:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        S SGDVY GG TGLAIWAVTLAG+LAGGALLVYNTSAL Q
Subjt:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

P49108 Photosystem II 10 kDa polypeptide, chloroplastic3.4e-5279.43Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTS-ASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKD
        MAASVM +SV+LKPA FTVEK SA+GLPSL R S +SF++ ASG KKIKTDKP+G+NGSM+LRDG+DASGRKGKG GVY+FVDKYGANVDGYSPIY+  +
Subjt:  MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTS-ASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKD

Query:  WSPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        WS SGDVY GG TGLAIWAVTLAG+LAGGALLVYNTSAL Q
Subjt:  WSPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

Q40163 Photosystem II 10 kDa polypeptide, chloroplastic4.3e-5582.01Show/hide
Query:  MAASVMTSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM+S+SLKP  FT+EK S KGLPSL R+S+SFKV ASG KK+KTDKPYGINGSM LRDG+DASGRK KGKGVYQ+VDKYGANVDGYSPIY+T +WS
Subjt:  MAASVMTSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWAVTL G+LAGGALLVYNTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

Q40519 Photosystem II 10 kDa polypeptide, chloroplastic6.0e-5783.45Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSA-KGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM   SLKPAPF+VEK+A KGLPSLAR+S+SF+V+ASG KK+KTDKPYGINGSM+LRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIY+T DWS
Subjt:  MAASVMTSVSLKPAPFTVEKSA-KGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWAVTL G+LAGGALLV+NTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

Arabidopsis top hitse value%identityAlignment
AT1G79040.1 photosystem II subunit R8.3e-5479.29Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW
        MAASVM +SV+LKPA FTVEK +A+GLPSL R   SFK+ ASG KKIKTDKP+GINGSM+LRDG+DASGRKGKG GVY++VDKYGANVDGYSPIY+  +W
Subjt:  MAASVM-TSVSLKPAPFTVEK-SAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW

Query:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        S SGDVY GG TGLAIWAVTLAG+LAGGALLVYNTSAL Q
Subjt:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGTCGGTGATGACCTCCGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAATCGGCAAAAGGTCTTCCGTCTCTCGCCAGGACTTCCGCCTCCTTCAAAGT
CGAGGCCAGCGGCGGGAAGAAGATCAAGACCGACAAACCCTACGGAATCAATGGTTCGATGAATTTGAGGGACGGACTTGATGCATCGGGAAGGAAGGGCAAGGGCAAGG
GAGTCTACCAGTTTGTCGACAAGTATGGGGCCAATGTCGATGGCTACAGTCCCATCTACGATACCAAGGACTGGTCTCCGAGTGGTGATGTCTATGTTGGTGGTACCACT
GGATTAGCCATTTGGGCAGTGACCTTGGCTGGGCTCCTTGCTGGAGGTGCTCTTCTTGTGTACAACACCAGTGCTTTGGTCCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTATTCATGTGGTTGTCATAATTAAAATGAAAATTACGTGGTCTCAGTTTTACAAGAAAATAAAGACAAAATACACAACATTTTATAATTCATTTAAAAATTACATCA
ATAAACCGAAGAGAAATGATCACAGCCGTTGAAGCAAAGATCAACGGCCGTTGTTTGAACTTGAACGGAAGCGGCTAAAATAGCTCGAAAAAAGATTCCAGATAACACAG
GAAGATTATATCCAGATTACCACCATTCACGGCCCGCCACGTGTCGCTCTGCCAATCACATTTCTCAGATTATCAAGCTCCGAGTTTCGCTTGCGCCATTGCAGATTTCC
CAGCAGAAGCAGCAGAAGAAGAAGAAGAAGAAAAAGCTCGTTGATCGGAAATGGCGGCGTCGGTGATGACCTCCGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAA
TCGGCAAAAGGTCTTCCGTCTCTCGCCAGGACTTCCGCCTCCTTCAAAGTCGAGGCCAGCGGCGGGAAGAAGATCAAGACCGACAAACCCTACGGAATCAATGGTTCGAT
GAATTTGAGGGACGGACTTGATGCATCGGGAAGGAAGGGCAAGGGCAAGGGAGTCTACCAGTTTGTCGACAAGTATGGGGCCAATGTCGATGGCTACAGTCCCATCTACG
ATACCAAGGACTGGTCTCCGAGTGGTGATGTCTATGTTGGTGGTACCACTGGATTAGCCATTTGGGCAGTGACCTTGGCTGGGCTCCTTGCTGGAGGTGCTCTTCTTGTG
TACAACACCAGTGCTTTGGTCCAGTAAGATTTGTTGGAATTTGGAAGTCTGTTTTTTTTTTTTTTTCAGAGTATAGCTTGTAGCATGTTATCATGAACCAACAATATTAA
GAAATTTGTGTAATTATCTGGACTATTTTGTCATAAGTGCTTTCTCTTCTTCTTGTTCTTTTCATTTATGCTTTTCCTGCATTACAGGTGATTGATCTACCTTGAAACCC
ATTTAATTTTATGTCACATTTTTCTTTTTTTGTGTGCAATGAAGGAAGATTTGAGGCTACACTCTAAATTTTTTTTTTTTTTAATGTGTCAGT
Protein sequenceShow/hide protein sequence
MAASVMTSVSLKPAPFTVEKSAKGLPSLARTSASFKVEASGGKKIKTDKPYGINGSMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTT
GLAIWAVTLAGLLAGGALLVYNTSALVQ