; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g0965 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g0965
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationMC10:8486767..8488847
RNA-Seq ExpressionMC10g0965
SyntenyMC10g0965
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.43e-18896.21Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_008452292.1 PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]4.28e-18995.45Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS  LLR TPFLGQ RGSPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVL KWL+V+FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022142746.1 chlorophyll a-b binding protein 13, chloroplastic [Momordica charantia]1.76e-197100Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022929511.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]7.40e-19096.21Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022985252.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]2.12e-18995.83Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATAT+T LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A1S3BUM8 Chlorophyll a-b binding protein, chloroplastic2.07e-18995.45Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS  LLR TPFLGQ RGSPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVL KWL+V+FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A5A7TY25 Chlorophyll a-b binding protein, chloroplastic2.07e-18995.45Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS  LLR TPFLGQ RGSPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVL KWL+V+FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1CN44 Chlorophyll a-b binding protein, chloroplastic8.52e-198100Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1ENC1 Chlorophyll a-b binding protein, chloroplastic3.58e-19096.21Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1J4D4 Chlorophyll a-b binding protein, chloroplastic1.03e-18995.83Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATAT+T LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
A2XJ35 Chlorophyll a-b binding protein, chloroplastic2.9e-10069.14Show/hide
Query:  STALLRPTPFLGQARGSPQNPLRDV-----------VAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALE
        ++AL + T FLG A      P RD            + M     +    +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LE
Subjt:  STALLRPTPFLGQARGSPQNPLRDV-----------VAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALE

Query:  VIHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFD
        VIH RWAMLGALGC+ PE+L K   V+F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FD
Subjt:  VIHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFD

Query:  PLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        PLGLADDP TFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  PLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P14278 Chlorophyll a-b binding protein 4, chloroplastic1.5e-10169.92Show/hide
Query:  STALLRPTPFLGQARGSPQNP-LRDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T  ++ + F+GQA G  QN  +R V   G  + TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  STALLRPTPFLGQARGSPQNP-LRDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC+ PE+L K   V+F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+++PVANNAW YAT F PG
Subjt:  LADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic3.0e-14290.15Show/hide
Query:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA+ST +++ TPFLGQ + +  NPLRDVVAMG+A++TM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCI PEVL KW++V+FKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PG+
Subjt:  DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic1.6e-13586.19Show/hide
Query:  MAAT---ATSTALLRPTPFL-GQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        MA+T   A S A++  TPFL GQ R +  +PLRD+ A    + TMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEV
Subjt:  MAAT---ATSTALLRPTPFL-GQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
        IHGRWAMLGALGC+ PEVL KW+ VEFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
Subjt:  IHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL

Query:  GLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        GLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLD+PVANNAWV+ATKFAPGS
Subjt:  GLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic5.7e-14189.06Show/hide
Query:  MAATAT-STALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MA+T T S+++L PT FLGQ + S  NPLRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MAATAT-STALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KW+RV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  DDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.2e-9668.92Show/hide
Query:  TPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPE
        +P   +  GS +  +R  VA    K   G+  WYG DRVKYLGPFS ++PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE
Subjt:  TPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPE

Query:  VLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKE
        +L +   V+F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  FDPLGLA DP  FAELKVKE
Subjt:  VLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKE

Query:  IKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        +KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW +AT F PG
Subjt:  IKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05070.1 photosystem II light harvesting complex gene 2.21.1e-9967.67Show/hide
Query:  STALLRPTPFLGQARGSPQNPL-RDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQ    P + L + V  +G  + TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STALLRPTPFLGQARGSPQNPL-RDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC  PE+L K   V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Subjt:  LADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.11.7e-10068.16Show/hide
Query:  STALLRPTPFLGQARGSPQNP-LRDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQ    P N  LR V   G  + TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STALLRPTPFLGQARGSPQNP-LRDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGALGC  PE+L K   V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG+
Subjt:  LADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

AT3G27690.1 photosystem II light harvesting complex gene 2.37.3e-9966.79Show/hide
Query:  STALLRPTPFLGQARGSPQNPL----------RDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        +T+ ++ + F GQ    P N L            ++   T K T    +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEV
Subjt:  STALLRPTPFLGQARGSPQNPL----------RDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGALGC  PE+L K   V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDP
Subjt:  IHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        L LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  LGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 34.1e-14289.06Show/hide
Query:  MAATAT-STALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MA+T T S+++L PT FLGQ + S  NPLRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MAATAT-STALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL KW+RV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  DDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACCGCCACCTCCACCGCCCTTCTCCGGCCGACCCCTTTTCTCGGCCAGGCCAGAGGGTCGCCGCAGAACCCCCTCAGAGATGTCGTCGCCATGGGGACTGC
CAAATACACCATGGGAAATGATCTGTGGTATGGGCCGGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCGTCGTACTTGAACGGAGAGTTCCCAGGCGACT
ATGGATGGGACACTGCTGGGTTGTCCGCTGATCCAGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATCCATGGGAGGTGGGCAATGTTGGGAGCTCTAGGGTGCATT
ACGCCGGAAGTGCTGGGAAAATGGTTGAGAGTGGAGTTTAAAGAGCCAGTGTGGTTTAAGGCTGGTGCCCAAATCTTCTCGGAGGGTGGGCTGGACTACTTGGGCAACCC
AAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGCTAGGCTTCCAAGTGGTGCTAATGGGGCTCGTGGAGGGCTTCCGCATCAACGGCCTCGATGGTGTCGGTGAAGGCA
ACGACCTCTACCCCGGCGGGCAGTACTTCGACCCCCTCGGCCTGGCCGATGACCCCACCACATTCGCTGAGCTTAAGGTCAAGGAGATCAAGAACGGGCGGCTCGCCATG
TTCTCCATGTTCGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCACTTGAGAACCTTCTCGACCATTTGGATAACCCAGTGGCTAACAATGCTTGGGTTTATGC
CACCAAATTTGCGCCAGGTTCATAG
mRNA sequenceShow/hide mRNA sequence
GGAAATTTGTTTTCTTAGTCATATTTACTGACCTCTAAAATTTGGGGGCTATTTATTTATTTTTTTTAAACAAAGAAAATTATCCTTTTTTTCTATATTTTTTTTAATGC
AAAAGGGAATTTTTTGTAGGAAGGAAAAAAAAAAGTGGAGTAGATAAGATGTGGATAGAAAGAGATGAGGTGAAGATACTTAAAATCTTTAGAAGGCTTGTGATTGGCTA
ACACAACCCTCTCATTACCCCCACAAAAATTTCTCAATCCTTCAATTCAATTCTCCACCACCCATTTGTTTCATAATATTCCCCCACTGCGTCCTTCTCTCTCTCACTTC
CACCGCAGCCCTTCTCAGAACCATCCACAGAGAGCTCCAATGGCCGCCACCGCCACCTCCACCGCCCTTCTCCGGCCGACCCCTTTTCTCGGCCAGGCCAGAGGGTCGCC
GCAGAACCCCCTCAGAGATGTCGTCGCCATGGGGACTGCCAAATACACCATGGGAAATGATCTGTGGTATGGGCCGGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCCC
AGACTCCGTCGTACTTGAACGGAGAGTTCCCAGGCGACTATGGATGGGACACTGCTGGGTTGTCCGCTGATCCAGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATC
CATGGGAGGTGGGCAATGTTGGGAGCTCTAGGGTGCATTACGCCGGAAGTGCTGGGAAAATGGTTGAGAGTGGAGTTTAAAGAGCCAGTGTGGTTTAAGGCTGGTGCCCA
AATCTTCTCGGAGGGTGGGCTGGACTACTTGGGCAACCCAAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGCTAGGCTTCCAAGTGGTGCTAATGGGGCTCGTGGAGG
GCTTCCGCATCAACGGCCTCGATGGTGTCGGTGAAGGCAACGACCTCTACCCCGGCGGGCAGTACTTCGACCCCCTCGGCCTGGCCGATGACCCCACCACATTCGCTGAG
CTTAAGGTCAAGGAGATCAAGAACGGGCGGCTCGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCACTTGAGAACCTTCTCGACCA
TTTGGATAACCCAGTGGCTAACAATGCTTGGGTTTATGCCACCAAATTTGCGCCAGGTTCATAGACACACATTCAATCTGGTGGGACTGGGAATTCAACAATTTGAAGTT
TGTGTAAATTGTTTCTACTTCCTTTTTGGTGTGAATGTGATTTATTAGAAAGTTGAGTAACTTGGATCAATGGACATTCCCACTTGATCGAATGAAGTTTCTTGATCTTA
CTTCGATGATTGAATTAAATCTAATTTAATTAATATAAATAAAATTAGATGTGTGAACATAGACGAATTATTACGTTGACCTTATTAACTCCTCAATACTTTTCGTTACA
TATCTAATTCTAATTCAATC
Protein sequenceShow/hide protein sequence
MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI
TPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAM
FSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS