CuGenDBv2

Gene ID	MC10g1002
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome location	MC10:9271141..9271773
RNA-Seq Expression	MC10g1002
Synteny	MC10g1002
Gene Ontology terms	GO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process) GO:0009570 - chloroplast stroma (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]

4.38e-99

77.1

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MAS HLH     +   LLP+SH +FT+P L   SKR +SIK  S DS+   NFPSPDP FSALN P +FPIEKRRRSEI+R+ +   EIAKPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEIN+EKPIGW+IMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVEERMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]

5.09e-100

77.1

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MAS HLH     +   LLP+SH +FT+P L   SKR +SIKC S DS+   NFPSPDPNF ALN P +FPIEKRRRS+I+R+ +   EIAKPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEI+VEKPIGW+IMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVEERMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]

5.35e-100

77.57

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MAS HLH     +   LLP+SH +FT+P L   SKR +SIK  S DS+   NFPSPDPNFSALN P +FPIEKRRRSEI+R+ +   EIAKPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEIN+EKPIGW+IMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVEERMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

XP_022154948.1 uncharacterized protein LOC111022091 [Momordica charantia]

2.29e-144

100

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKR
        MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKR
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKR

Query:  TKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKAR
        TKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKAR
Subjt:  TKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKAR

Query:  CRQAILVANSF
        CRQAILVANSF
Subjt:  CRQAILVANSF

XP_022932131.1 uncharacterized protein LOC111438454 [Cucurbita moschata]

3.41e-96

74.3

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MA  HLHL    +   LLPRS   FT+P   TP +R +S+KC+S  S+   NFPSP+P+F ALN P SFPIEKRRRSEIVR+ R  ++I KPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEIN+EKP+GW+IMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVE+RMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D8 Uncharacterized protein

2.47e-100

77.1

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MAS HLH     +   LLP+SH +FT+P L   SKR +SIKC S DS+   NFPSPDPNF ALN P +FPIEKRRRS+I+R+ +   EIAKPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEI+VEKPIGW+IMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVEERMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

A0A1S3BT06 uncharacterized protein LOC103493403

2.59e-100

77.57

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MAS HLH     +   LLP+SH +FT+P L   SKR +SIK  S DS+   NFPSPDPNFSALN P +FPIEKRRRSEI+R+ +   EIAKPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEIN+EKPIGW+IMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVEERMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

2.12e-99

77.1

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MAS HLH     +   LLP+SH +FT+P L   SKR +SIK  S DS+   NFPSPDP FSALN P +FPIEKRRRSEI+R+ +   EIAKPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEIN+EKPIGW+IMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVEERMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

A0A6J1DLN8 uncharacterized protein LOC111022091

1.11e-144

100

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKR
        MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKR
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKR

Query:  TKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKAR
        TKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKAR
Subjt:  TKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKAR

Query:  CRQAILVANSF
        CRQAILVANSF
Subjt:  CRQAILVANSF

A0A6J1EVI2 uncharacterized protein LOC111438454

1.65e-96

74.3

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Query:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG
        MA  HLHL    +   LLPRS   FT+P   TP +R +S+KC+S  S+   NFPSP+P+F ALN P SFPIEKRRRSEIVR+ R  ++I KPEPPNFEIG
Subjt:  MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSD---NFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIG

Query:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA
        WKRTKEIN+EKP+GW+IMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEA+IL D+GKVE+RMV EL RVL+LMEMDLAMVKAAVK++TLSERL QA
Subjt:  WKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQA

Query:  KARCRQAILVANSF
        KARCRQAILVANSF
Subjt:  KARCRQAILVANSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51100.1 unknown protein

1.0e-58

72.32

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Query:  SIKCAS-PDS-DNFPSPDPNFSALNSPSS--FPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTEL
        S KC+S P+S D F +  P   ++N+ S+  FPIEKRRRSEI+R+ R +  I KPEPPNFEIGWKRTKEIN+EKP G+VIMDFLEK E LM REFGS EL
Subjt:  SIKCAS-PDS-DNFPSPDPNFSALNSPSS--FPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKRTKEINVEKPIGWVIMDFLEKLEGLMEREFGSTEL

Query:  LAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKARCRQAILVANSF
        LAK GEIVAERAREEA++L DEGKVEERMV EL RVL+LMEMDLAMVKA+VK++TLS+R+ QA+ARCRQAILVANSF
Subjt:  LAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKARCRQAILVANSF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCCCACACCTCCATCTCCATCTCCATCTCCATCTCCATCGTCTTCTCCCTCGATCTCATCTCAATTTCACAAGCCCCTCCCTCCCGACCCCATCAAAACGGTG
CGTTTCCATCAAATGCGCCTCCCCAGACTCCGACAATTTCCCATCCCCAGACCCCAATTTCAGCGCCCTGAACAGCCCTTCGAGCTTCCCAATCGAGAAGCGGAGGAGAT
CCGAGATCGTCCGCGAGGGGCGGCGGAGAGAGGAAATAGCGAAGCCGGAGCCGCCGAACTTCGAGATCGGGTGGAAGAGGACGAAGGAGATCAACGTGGAGAAGCCGATC
GGGTGGGTGATAATGGACTTTCTGGAGAAGCTGGAGGGGCTGATGGAGAGGGAATTCGGGTCGACGGAGCTGCTGGCGAAGGTGGGAGAGATCGTGGCGGAGAGGGCGAG
GGAGGAGGCGGACATTCTGGCGGACGAGGGGAAAGTGGAGGAGAGAATGGTGAGGGAGCTGTGCAGAGTTCTGAGGCTGATGGAGATGGATTTGGCGATGGTGAAGGCGG
CGGTCAAGGAAGACACGCTGAGCGAGAGGCTGAATCAGGCCAAGGCCAGGTGCAGGCAAGCCATACTTGTTGCTAATTCTTTC

mRNA sequence

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Protein sequence

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MASPHLHLHLHLHLHRLLPRSHLNFTSPSLPTPSKRCVSIKCASPDSDNFPSPDPNFSALNSPSSFPIEKRRRSEIVREGRRREEIAKPEPPNFEIGWKRTKEINVEKPI
GWVIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEADILADEGKVEERMVRELCRVLRLMEMDLAMVKAAVKEDTLSERLNQAKARCRQAILVANSF

MC10g1002 (gene) of Bitter gourd (Dali-11) v1 genome