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MC10g1019 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1019
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionpolyubiquitin-like
Genome locationMC10:9574240..9574642
RNA-Seq ExpressionMC10g1019
SyntenyMC10g1019
Gene Ontology termsGO:0039648 - modulation by virus of host protein ubiquitination (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0042025 - host cell nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1823229.1 unnamed protein product [Ananas comosus var. bracteatus]2.65e-0836.27Show/hide
Query:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKD--KMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDN
        D+ E+EDY  ++    D++RR+   R        KM+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++
Subjt:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKD--KMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDN

Query:  VV
         +
Subjt:  VV

KAG2582037.1 hypothetical protein PVAP13_6KG092800 [Panicum virgatum]3.46e-0844.44Show/hide
Query:  RPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        RP D M+I L+    K   L V   Y IA++KAKI  +EGIP+ Q+ L F  + LED +TLADY I+ ++++
Subjt:  RPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]9.29e-1645.26Show/hide
Query:  LLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS
        L++NE+ A  F+ M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+ L F G +L+D  TL   G+ S
Subjt:  LLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]2.72e-1136Show/hide
Query:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        D  +N      F+ ++ KLR++WL+R L    +M+I +++   K +   +     I  +KAKI A EG P  Q+ L + GR+LED  TLA+Y IRS + +
Subjt:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

XP_022154972.1 ubiquitin-like isoform X2 [Momordica charantia]6.35e-0934Show/hide
Query:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        D  +N      F+ ++ KLR++WL+R L    ++ +  ++   K +   +     I  +KAKI A EG P  Q+ L + GR+LED  TLA+Y IRS + +
Subjt:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

TrEMBL top hitse value%identityAlignment
A0A1S3CKU5 polyubiquitin-like4.50e-1645.26Show/hide
Query:  LLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS
        L++NE+ A  F+ M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+ L F G +L+D  TL   G+ S
Subjt:  LLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS

A0A5D3BMH5 Polyubiquitin-like4.50e-1645.26Show/hide
Query:  LLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS
        L++NE+ A  F+ M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+ L F G +L+D  TL   G+ S
Subjt:  LLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRS

A0A6J1DL46 ubiquitin-like isoform X11.32e-1136Show/hide
Query:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        D  +N      F+ ++ KLR++WL+R L    +M+I +++   K +   +     I  +KAKI A EG P  Q+ L + GR+LED  TLA+Y IRS + +
Subjt:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

A0A6J1DN50 ubiquitin-like isoform X23.07e-0934Show/hide
Query:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        D  +N      F+ ++ KLR++WL+R L    ++ +  ++   K +   +     I  +KAKI A EG P  Q+ L + GR+LED  TLA+Y IRS + +
Subjt:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

A0A6V7NXD3 Uncharacterized protein1.28e-0836.27Show/hide
Query:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKD--KMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDN
        D+ E+EDY  ++    D++RR+   R        KM+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++
Subjt:  DLLENEDYAGAFLEMNDKLRRKWLIRKLRPKD--KMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDN

Query:  VV
         +
Subjt:  VV

SwissProt top hitse value%identityAlignment
P0CG71 Polyubiquitin-A2.7e-0639.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++  I K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TL+DY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

P0CH27 Ubiquitin-60S ribosomal protein L404.6e-0639.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

P16709 viral Ubiquitin5.4e-0738.81Show/hide
Query:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        M+I ++    K +         +ADLK KIA +EG+P+ Q+ L F G++LEDS+T+ADY I+ ++ +
Subjt:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

P69315 Polyubiquitin (Fragment)2.7e-0641.1Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I L+    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

Q3E7K8 Polyubiquitin 123.5e-0641.1Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I +LKAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

Arabidopsis top hitse value%identityAlignment
AT1G53930.1 Ubiquitin-like superfamily protein1.5e-0740.3Show/hide
Query:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        M I ++    + +VL V     I ++KAKI  ++GIP+ Q+ L F+G++LED  TLADY I++D+++
Subjt:  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT1G55060.1 ubiquitin 122.5e-0741.1Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I +LKAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT4G02890.1 Ubiquitin family protein4.3e-0739.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT4G05050.1 ubiquitin 114.3e-0739.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV

AT4G05320.2 polyubiquitin 104.3e-0739.73Show/hide
Query:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV
        LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  TLADY I+ ++ +
Subjt:  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCGATTTACTGGAGAATGAGGACTACGCCGGAGCATTTCTTGAAATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGATGAAGAT
TTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTGGAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAAC
AAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAACTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTG
mRNA sequenceShow/hide mRNA sequence
TTCGATTTACTGGAGAATGAGGACTACGCCGGAGCATTTCTTGAAATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGATGAAGAT
TTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTGGAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAAC
AAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAACTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTG
Protein sequenceShow/hide protein sequence
FDLLENEDYAGAFLEMNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVV