; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g1022 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1022
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-H2 finger protein ATL22-like
Genome locationMC10:9793283..9800038
RNA-Seq ExpressionMC10g1022
SyntenyMC10g1022
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0030247 - polysaccharide binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031157.1 putative RING-H2 finger protein ATL21A, partial [Cucurbita argyrosperma subsp. argyrosperma]6.71e-5970.59Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I  LL LIG+GC +C KFKAFTRPN  TTNLS  +GH+PTS VAGL+ PTIE FPKT+L E+RRLPKPN+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH+NC+DEWLKL+ TCPVCRN P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

XP_022136471.1 RING-H2 finger protein ATL22-like [Momordica charantia]8.14e-6677.21Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I SLLLLIG+GCCIC KFK FTR N +  NLS  +GHEPTS VAGL+GPTIE FPKT+L E+RRLPKPN+NTCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+CDHYFHANCVDEWLKLH TCPVCRN PD+S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

XP_022942660.1 putative RING-H2 finger protein ATL21A [Cucurbita moschata]1.34e-5869.85Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I  LL +IG+GC +C KFKAFTRPN  TTNLS  +GH+PTS VAGL+ PTIE FPKT+L E+RRLPKPN+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH+NC+DEWLKL+ TCPVCRN P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

XP_022981252.1 putative RING-H2 finger protein ATL21A [Cucurbita maxima]8.38e-5767.65Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLI+GV I  LL +IG+GC +C KFKAFTRPN  TTNLS  +GH+PTS VAGL+ PTI+ FPK +L E+RRLPKPN+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH+NC+DEWLKL+ TCPVCRN P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

XP_023554222.1 putative RING-H2 finger protein ATL21A [Cucurbita pepo subsp. pepo]1.34e-5869.85Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I  LL +IG+GC +C KFKAFTRPN  TTNLS  +GH+PTS VAGL+ PTIE FPKT+L E+RRLPKPN+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH+NC+DEWLKL+ TCPVCRN P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

TrEMBL top hitse value%identityAlignment
A0A0A0KUW6 RING-type domain-containing protein4.98e-5469.85Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I  LL LIG+   IC K KAF RPN  T+NLS  LGHEPTST AGL+GPTIE FPKT L ++RRLPK N+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FHANCVDEWLKL+ TCPVCR  PD S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

A0A5A7TNI3 Putative RING-H2 finger protein ATL21A5.94e-5366.91Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I  +L LIG+ C IC K KAF RPN  ++NLS  LGH+PTST AGL+GPTIE FPKT L ++RRLPK N+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH NCVDEWLKL+ TCPVCR  P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

A0A6J1C3L1 RING-H2 finger protein ATL22-like3.94e-6677.21Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I SLLLLIG+GCCIC KFK FTR N +  NLS  +GHEPTS VAGL+GPTIE FPKT+L E+RRLPKPN+NTCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+CDHYFHANCVDEWLKLH TCPVCRN PD+S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

A0A6J1FWQ0 putative RING-H2 finger protein ATL21A6.47e-5969.85Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLIIGV I  LL +IG+GC +C KFKAFTRPN  TTNLS  +GH+PTS VAGL+ PTIE FPKT+L E+RRLPKPN+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH+NC+DEWLKL+ TCPVCRN P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

A0A6J1ITH0 putative RING-H2 finger protein ATL21A4.06e-5767.65Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET
        GI RGAKYGLI+GV I  LL +IG+GC +C KFKAFTRPN  TTNLS  +GH+PTS VAGL+ PTI+ FPK +L E+RRLPKPN+ TCAICL      ET
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ET

Query:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        IRTIP+C H+FH+NC+DEWLKL+ TCPVCRN P+ S
Subjt:  IRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

SwissProt top hitse value%identityAlignment
P0CH01 Putative RING-H2 finger protein ATL21A2.0e-1742.19Show/hide
Query:  IIGVSIVSLLLL----IGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNN-TCAICLKSIS--ETIRTIP
        II +SI+  L +    I VG C   +F +  + N     +++L  +E   T  GL+   IE + KTEL E+RRLP  N++  C ICL   +  ET+R IP
Subjt:  IIGVSIVSLLLL----IGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNN-TCAICLKSIS--ETIRTIP

Query:  NCDHYFHANCVDEWLKLHVTCPVCRNLP
         CDH FH+ C+D WLK+H +CP+CRN P
Subjt:  NCDHYFHANCVDEWLKLHVTCPVCRNLP

P0CH02 Putative RING-H2 finger protein ATL21B4.1e-1840.6Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVA--GLNGPTIEFPKT-ELDENRRLPKPNNNTCAICLKSI--S
        G L  A   ++I +SI+  ++L  V C   R      R +W     ++ +  +P   +A  GL+  TIE  KT EL E+RR P  N   C ICL      
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVA--GLNGPTIEFPKT-ELDENRRLPKPNNNTCAICLKSI--S

Query:  ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN
        ET+R IP CDH FHA C+D WLK+H +CP+CRN
Subjt:  ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN

Q9C7E9 RING-H2 finger protein ATL203.4e-1755.56Show/hide
Query:  GLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN
        GL+  TIE + K EL E+RRLP  N   C ICL   +  ET+R +P CDH FH  C+DEWLK+H +CPVCRN
Subjt:  GLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN

Q9FL42 Putative RING-H2 finger protein ATL692.3e-2141.67Show/hide
Query:  GAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICL--KSISETIRTI
        G  YG+ I VSI+ L+  I +   IC + K+  R    T+++   L         GL+ P IE +P+  L ++RRLP+PNN  C+ICL      E +R I
Subjt:  GAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICL--KSISETIRTI

Query:  PNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        P C+H FH +CVDEWL+   TCP+CRN P  S
Subjt:  PNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

Q9SKK8 RING-H2 finger protein ATL221.0e-1648.35Show/hide
Query:  LSSLLGHEPTSTVA--GLNGPTIE-FPKTELDENRRLPKPNNN-TCAICLK--SISETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLP
        LS  +  +P++ VA  GL+  TIE + K EL E+RRLP  +N+  C ICL   +  ET+R +P C+H FH  C+D WLKLH +CPVCR+ P
Subjt:  LSSLLGHEPTSTVA--GLNGPTIE-FPKTELDENRRLPKPNNN-TCAICLK--SISETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLP

Arabidopsis top hitse value%identityAlignment
AT1G28040.1 RING/U-box superfamily protein2.4e-1855.56Show/hide
Query:  GLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN
        GL+  TIE + K EL E+RRLP  N   C ICL   +  ET+R +P CDH FH  C+DEWLK+H +CPVCRN
Subjt:  GLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSIS--ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN

AT2G46494.1 RING/U-box superfamily protein2.9e-1940.6Show/hide
Query:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVA--GLNGPTIEFPKT-ELDENRRLPKPNNNTCAICLKSI--S
        G L  A   ++I +SI+  ++L  V C   R      R +W     ++ +  +P   +A  GL+  TIE  KT EL E+RR P  N   C ICL      
Subjt:  GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVA--GLNGPTIEFPKT-ELDENRRLPKPNNNTCAICLKSI--S

Query:  ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN
        ET+R IP CDH FHA C+D WLK+H +CP+CRN
Subjt:  ETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRN

AT2G46495.1 RING/U-box superfamily protein1.4e-1842.19Show/hide
Query:  IIGVSIVSLLLL----IGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNN-TCAICLKSIS--ETIRTIP
        II +SI+  L +    I VG C   +F +  + N     +++L  +E   T  GL+   IE + KTEL E+RRLP  N++  C ICL   +  ET+R IP
Subjt:  IIGVSIVSLLLL----IGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNN-TCAICLKSIS--ETIRTIP

Query:  NCDHYFHANCVDEWLKLHVTCPVCRNLP
         CDH FH+ C+D WLK+H +CP+CRN P
Subjt:  NCDHYFHANCVDEWLKLHVTCPVCRNLP

AT5G07040.1 RING/U-box superfamily protein1.6e-2241.67Show/hide
Query:  GAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICL--KSISETIRTI
        G  YG+ I VSI+ L+  I +   IC + K+  R    T+++   L         GL+ P IE +P+  L ++RRLP+PNN  C+ICL      E +R I
Subjt:  GAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICL--KSISETIRTI

Query:  PNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS
        P C+H FH +CVDEWL+   TCP+CRN P  S
Subjt:  PNCDHYFHANCVDEWLKLHVTCPVCRNLPDKS

AT5G53110.1 RING/U-box superfamily protein2.4e-2643.88Show/hide
Query:  ILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTR-----PNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSI-
        I R A+Y + +G  I   L++ G+ C +  K  +  +     P  +  N  +   H  +  V GL+GPTIE +PK  L E++RLPK ++ TCAICL    
Subjt:  ILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTR-----PNWQTTNLSSLLGHEPTSTVAGLNGPTIE-FPKTELDENRRLPKPNNNTCAICLKSI-

Query:  -SETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDK
          ET+RTIP C H FHA+C+DEWLKL+ TCPVCRN P++
Subjt:  -SETIRTIPNCDHYFHANCVDEWLKLHVTCPVCRNLPDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGATTTTGAGGGGTGCCAAGTATGGGTTAATCATAGGGGTGAGCATCGTGAGCCTCCTCTTATTAATTGGGGTGGGTTGTTGCATCTGCAGGAAATTCAAGGCCTTCAC
TCGGCCCAATTGGCAAACGACGAACCTCTCATCTCTATTAGGCCATGAGCCCACTTCCACCGTAGCAGGCCTGAATGGACCGACCATCGAATTCCCCAAGACGGAGCTAG
ATGAGAATCGGCGGCTGCCGAAGCCTAACAACAACACGTGTGCCATATGCTTGAAGAGTATTAGCGAAACCATAAGAACCATACCAAATTGCGACCACTATTTCCATGCC
AATTGTGTGGATGAGTGGCTTAAATTACATGTCACGTGTCCGGTGTGTCGGAACTTGCCAGACAAATCC
mRNA sequenceShow/hide mRNA sequence
GGGATTTTGAGGGGTGCCAAGTATGGGTTAATCATAGGGGTGAGCATCGTGAGCCTCCTCTTATTAATTGGGGTGGGTTGTTGCATCTGCAGGAAATTCAAGGCCTTCAC
TCGGCCCAATTGGCAAACGACGAACCTCTCATCTCTATTAGGCCATGAGCCCACTTCCACCGTAGCAGGCCTGAATGGACCGACCATCGAATTCCCCAAGACGGAGCTAG
ATGAGAATCGGCGGCTGCCGAAGCCTAACAACAACACGTGTGCCATATGCTTGAAGAGTATTAGCGAAACCATAAGAACCATACCAAATTGCGACCACTATTTCCATGCC
AATTGTGTGGATGAGTGGCTTAAATTACATGTCACGTGTCCGGTGTGTCGGAACTTGCCAGACAAATCC
Protein sequenceShow/hide protein sequence
GILRGAKYGLIIGVSIVSLLLLIGVGCCICRKFKAFTRPNWQTTNLSSLLGHEPTSTVAGLNGPTIEFPKTELDENRRLPKPNNNTCAICLKSISETIRTIPNCDHYFHA
NCVDEWLKLHVTCPVCRNLPDKS