; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g1034 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1034
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein LHCP TRANSLOCATION DEFECT
Genome locationMC10:10054560..10056792
RNA-Seq ExpressionMC10g1034
SyntenyMC10g1034
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0090391 - granum assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0009941 - chloroplast envelope (cellular component)
InterPro domainsIPR036770 - Ankyrin repeat-containing domain superfamily
IPR044242 - Protein LHCP TRANSLOCATION DEFECT-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152919.1 protein LHCP TRANSLOCATION DEFECT [Cucumis sativus]2.19e-9684.52Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MAS+SCT+SIN TP  F SR   K+GS FLG  S L W +P++IGPSNGSRATCWFN RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA+YDVKDVDGRTA+DRA +EEIKDFILNF+ KKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

XP_008463435.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo]2.97e-9483.93Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MAS+SCT SIN TP  F SR   K+ S FLG  S L W +P++IGPSNGSRATCWFN RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA+YDVKDVDGRTAIDRA +EEIKDFIL F+ KKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

XP_022150983.1 protein LHCP TRANSLOCATION DEFECT [Momordica charantia]9.47e-116100Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

XP_022985270.1 protein LHCP TRANSLOCATION DEFECT [Cucurbita maxima]3.08e-9485.12Show/hide
Query:  MASVSCTA-SINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        MASVSCT+ SIN +P  F SR   K+GS+FLG  S L W +PIAIGPSNGSRATCWFN RQNAEGAGIYGSQSRDDF RDDVEQYFNYMGMLAVEGTYDK
Subjt:  MASVSCTA-SINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKK
        MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTAIDRAP++EIKDFILNF+V+K
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKK

XP_038903413.1 protein LHCP TRANSLOCATION DEFECT [Benincasa hispida]1.26e-9584.52Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MAS+SCT S+N TP  F SR   K+ S+FLG  S L W +P+AIGPSNGSRATCWFN RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTAIDRAP+EEIKDFILN +VK A
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

TrEMBL top hitse value%identityAlignment
A0A0A0L309 ANK_REP_REGION domain-containing protein1.06e-9684.52Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MAS+SCT+SIN TP  F SR   K+GS FLG  S L W +P++IGPSNGSRATCWFN RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA+YDVKDVDGRTA+DRA +EEIKDFILNF+ KKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

A0A1S3CJ75 protein LHCP TRANSLOCATION DEFECT1.44e-9483.93Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MAS+SCT SIN TP  F SR   K+ S FLG  S L W +P++IGPSNGSRATCWFN RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA+YDVKDVDGRTAIDRA +EEIKDFIL F+ KKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

A0A5D3BT07 Protein LHCP TRANSLOCATION DEFECT1.44e-9483.93Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MAS+SCT SIN TP  F SR   K+ S FLG  S L W +P++IGPSNGSRATCWFN RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA+YDVKDVDGRTAIDRA +EEIKDFIL F+ KKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

A0A6J1DAX7 protein LHCP TRANSLOCATION DEFECT4.58e-116100Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
        MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKM

Query:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
Subjt:  EALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

A0A6J1JAV9 protein LHCP TRANSLOCATION DEFECT1.49e-9485.12Show/hide
Query:  MASVSCTA-SINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        MASVSCT+ SIN +P  F SR   K+GS+FLG  S L W +PIAIGPSNGSRATCWFN RQNAEGAGIYGSQSRDDF RDDVEQYFNYMGMLAVEGTYDK
Subjt:  MASVSCTA-SINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKK
        MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTAIDRAP++EIKDFILNF+V+K
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKK

SwissProt top hitse value%identityAlignment
A2YLX7 Protein LHCP TRANSLOCATION DEFECT4.3e-4961.71Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAP---IAIGPSNGS---RATCWFNF-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV
        MAS+ CT  ++   +  ++ ++++   R     ++LGW  P    A+ P++ S     TC+F F  ++AEGAGIYGSQ RDDF+RDDVEQYFNYMGMLAV
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAP---IAIGPSNGS---RATCWFNF-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV

Query:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EGTYDKMEALL+QDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA +++ ++FIL FA   A
Subjt:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

A3BKF2 Protein LHCP TRANSLOCATION DEFECT4.3e-4961.71Show/hide
Query:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAP---IAIGPSNGS---RATCWFNF-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV
        MAS+ CT  ++   +  ++ ++++   R     ++LGW  P    A+ P++ S     TC+F F  ++AEGAGIYGSQ RDDF+RDDVEQYFNYMGMLAV
Subjt:  MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAP---IAIGPSNGS---RATCWFNF-RQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAV

Query:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        EGTYDKMEALL+QDIHPVDILLMLAASEGDKPKLEELLRAGA YDVKDVDGRTA+DRA +++ ++FIL FA   A
Subjt:  EGTYDKMEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

Q8VY88 Protein LHCP TRANSLOCATION DEFECT2.0e-5466.27Show/hide
Query:  SVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        S SC  S+  +    TS S   + SRFLG  +      P  +GPSNGSR TCWF F +N   AE AGIYGSQSRDDF+RDDVEQYFNYMGMLAVEGTY K
Subjt:  SVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        MEALL+ +IHPVDILLMLAA+EGD+PK+EELL+AGA Y VKD DGRTAIDRA SEEI+D IL ++ +KA
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA

Arabidopsis top hitse value%identityAlignment
AT1G50900.1 Ankyrin repeat family protein1.4e-5566.27Show/hide
Query:  SVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK
        S SC  S+  +    TS S   + SRFLG  +      P  +GPSNGSR TCWF F +N   AE AGIYGSQSRDDF+RDDVEQYFNYMGMLAVEGTY K
Subjt:  SVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQN---AEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDK

Query:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA
        MEALL+ +IHPVDILLMLAA+EGD+PK+EELL+AGA Y VKD DGRTAIDRA SEEI+D IL ++ +KA
Subjt:  MEALLSQDIHPVDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTCTCCTGCACTGCCTCCATAAATTTCACCCCAACATGCTTCACTTCCCGTTCTTCCTCGAAAATGGGTTCCCGATTTCTTGGGTTTCATTCTAAGCTCGG
TTGGACCGCGCCCATCGCCATTGGACCCTCCAATGGGTCTAGAGCTACGTGCTGGTTCAATTTTCGCCAAAATGCCGAAGGTGCCGGCATTTATGGCAGCCAGTCCCGAG
ATGACTTCAACAGAGACGATGTCGAGCAGTATTTTAACTACATGGGAATGCTGGCTGTGGAGGGTACATATGACAAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCA
GTGGACATTTTGCTGATGCTGGCTGCATCAGAAGGGGACAAACCAAAGCTTGAAGAACTATTGAGAGCTGGAGCTACTTATGATGTGAAAGATGTGGATGGACGAACTGC
CATTGATAGGGCACCCAGTGAAGAAATCAAAGATTTTATTCTTAATTTTGCTGTTAAGAAAGCATAA
mRNA sequenceShow/hide mRNA sequence
TACCAAGCTTATTTTTTTGGGCCCCCAAAATCTATCCATCCATCATCAGAGAGATGGCCTTTTTCTCTCTCAAACTCCATCCAACGTCCAAGATCTTCTCTGCAATACGG
AGTGGATAAAACCTGCAACTGCAACTTCCAAAACTTGCTCAAAACTCTGCCATGGCTTCCGTCTCCTGCACTGCCTCCATAAATTTCACCCCAACATGCTTCACTTCCCG
TTCTTCCTCGAAAATGGGTTCCCGATTTCTTGGGTTTCATTCTAAGCTCGGTTGGACCGCGCCCATCGCCATTGGACCCTCCAATGGGTCTAGAGCTACGTGCTGGTTCA
ATTTTCGCCAAAATGCCGAAGGTGCCGGCATTTATGGCAGCCAGTCCCGAGATGACTTCAACAGAGACGATGTCGAGCAGTATTTTAACTACATGGGAATGCTGGCTGTG
GAGGGTACATATGACAAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCAGTGGACATTTTGCTGATGCTGGCTGCATCAGAAGGGGACAAACCAAAGCTTGAAGAACT
ATTGAGAGCTGGAGCTACTTATGATGTGAAAGATGTGGATGGACGAACTGCCATTGATAGGGCACCCAGTGAAGAAATCAAAGATTTTATTCTTAATTTTGCTGTTAAGA
AAGCATAATTTGGTCTCTCCTTGTTCTTCTTTGGTTTGTTTTTGGGGAGTGGCTATATTTTGATAGGTTTAGAAAGAGGTTTTAAAGATTTGTATTCCACTAATGTTAAA
TCATATTGTATTTAAATGACACACCTATTTTAATCCATTAGGAAATGGCTTCTAAATTTAAAGTCTTATTTATAA
Protein sequenceShow/hide protein sequence
MASVSCTASINFTPTCFTSRSSSKMGSRFLGFHSKLGWTAPIAIGPSNGSRATCWFNFRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHP
VDILLMLAASEGDKPKLEELLRAGATYDVKDVDGRTAIDRAPSEEIKDFILNFAVKKA