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MC10g1061 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1061
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationMC10:10829458..10829720
RNA-Seq ExpressionMC10g1061
SyntenyMC10g1061
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030923.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma]1.93e-4686.36Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEME++QLEQLK SL ELK NVTQQADRIL+QTSNGNPPPQFF +P+PANPNQQGGV+VVD KNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

TYK29439.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa]4.88e-3674.74Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTS-NGNPPPQFF-----PSPSPAN-PNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEMEM+QLEQLKASL ELK NVTQQADRIL+QTS N NPP Q       P+P+  N PNQQ G+FVVDPKN+ISHLP++YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTS-NGNPPPQFF-----PSPSPAN-PNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

XP_022149295.1 agamous-like MADS-box protein AGL62 [Momordica charantia]6.29e-5092.05Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEMEMNQLEQLK SL ELK NVTQ ADRILVQTSNGNPPPQ+FP+PSPANPNQQGGVFVVDPKNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

XP_022942821.1 agamous-like MADS-box protein AGL62 [Cucurbita moschata]1.18e-4787.5Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEME++QLEQLK SL ELK NVTQQADRIL+QTSNGNPPPQFFP+P+PANPNQQGGV+VVD KNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

XP_022975753.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]2.74e-4686.36Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEME+ QLEQLK SL ELK NV QQADRIL+QTSNGNPPPQFFP+P+PANPNQQGGV+VVD KNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

TrEMBL top hitse value%identityAlignment
A0A5A7TM75 Agamous-like MADS-box protein AGL624.39e-3674.74Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTS-NGNPPPQFF-----PSPSPAN-PNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEMEM+QLEQLKASL ELK NVTQQADRIL+QTS N NPP Q       P+P+  N PNQQ G+FVVDPKN+ISHLP++YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTS-NGNPPPQFF-----PSPSPAN-PNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

A0A5D3E151 Agamous-like MADS-box protein AGL622.36e-3674.74Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTS-NGNPPPQFF-----PSPSPAN-PNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEMEM+QLEQLKASL ELK NVTQQADRIL+QTS N NPP Q       P+P+  N PNQQ G+FVVDPKN+ISHLP++YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTS-NGNPPPQFF-----PSPSPAN-PNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

A0A6J1D5B6 agamous-like MADS-box protein AGL623.05e-5092.05Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEMEMNQLEQLK SL ELK NVTQ ADRILVQTSNGNPPPQ+FP+PSPANPNQQGGVFVVDPKNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

A0A6J1FPY5 agamous-like MADS-box protein AGL625.73e-4887.5Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEME++QLEQLK SL ELK NVTQQADRIL+QTSNGNPPPQFFP+P+PANPNQQGGV+VVD KNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

A0A6J1IK72 agamous-like MADS-box protein AGL621.33e-4686.36Show/hide
Query:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF
        WWELPIEEME+ QLEQLK SL ELK NV QQADRIL+QTSNGNPPPQFFP+P+PANPNQQGGV+VVD KNMISHLPY+YGSYGSRGFF
Subjt:  WWELPIEEMEMNQLEQLKASLGELK-NVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTGGGAGCTCCCCATCGAAGAGATGGAAATGAATCAACTCGAGCAGCTCAAGGCATCATTGGGGGAGTTGAAAAATGTCACACAACAAGCTGACCGGATTTTGGTTCA
AACCTCCAATGGTAATCCACCGCCACAATTCTTCCCGAGTCCGTCACCTGCAAACCCAAACCAGCAAGGCGGCGTTTTCGTCGTGGATCCGAAGAACATGATCTCTCATC
TTCCCTACAGCTATGGCTCCTATGGATCAAGAGGTTTCTTT
mRNA sequenceShow/hide mRNA sequence
TGGTGGGAGCTCCCCATCGAAGAGATGGAAATGAATCAACTCGAGCAGCTCAAGGCATCATTGGGGGAGTTGAAAAATGTCACACAACAAGCTGACCGGATTTTGGTTCA
AACCTCCAATGGTAATCCACCGCCACAATTCTTCCCGAGTCCGTCACCTGCAAACCCAAACCAGCAAGGCGGCGTTTTCGTCGTGGATCCGAAGAACATGATCTCTCATC
TTCCCTACAGCTATGGCTCCTATGGATCAAGAGGTTTCTTT
Protein sequenceShow/hide protein sequence
WWELPIEEMEMNQLEQLKASLGELKNVTQQADRILVQTSNGNPPPQFFPSPSPANPNQQGGVFVVDPKNMISHLPYSYGSYGSRGFF