; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g1062 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1062
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationMC10:10829899..10830271
RNA-Seq ExpressionMC10g1062
SyntenyMC10g1062
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030923.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma]7.33e-6485.83Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLN LEMERKR EELNKLRK++
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

XP_004150272.1 agamous-like MADS-box protein AGL62 [Cucumis sativus]5.93e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

XP_008454428.1 PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]5.57e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

XP_022149295.1 agamous-like MADS-box protein AGL62 [Momordica charantia]6.33e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

XP_022942821.1 agamous-like MADS-box protein AGL62 [Cucurbita moschata]7.33e-6485.83Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLN LEMERKR EELNKLRK++
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

TrEMBL top hitse value%identityAlignment
A0A0A0KWA9 MADS-box domain-containing protein2.87e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

A0A1S3BYP6 agamous-like MADS-box protein AGL622.70e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

A0A5A7TM75 Agamous-like MADS-box protein AGL622.70e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

A0A6J1D5B6 agamous-like MADS-box protein AGL623.07e-6587.4Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLNQLEMERKR EELNKLRK+S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

A0A6J1IK72 agamous-like MADS-box protein AGL623.55e-6485.83Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN
        MR+SRGRQKVEMVKMPNESNLQ+TFSK    LFKKASELCTLCGAEIAII+FSPGKKVFSFGHPCVEALIERFVTRNPP SS TLQLI AH NANVR+LN
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPP-SSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
         Q+TQVLN LEMERKR EELNKLRK++
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

SwissProt top hitse value%identityAlignment
O64703 Agamous-like MADS-box protein AGL297.3e-1435.54Show/hide
Query:  GRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQMTQV
        GR+K++M  + + +  Q+TFSK    LFKKASEL TLC AE+ I++FSPG K FS+G P ++++ ERF+     S S  +    ++   +++L+ ++  +
Subjt:  GRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQMTQV

Query:  LNQLEMERKRVEELNKLRKSS
          ++E E++R E+  +  +S+
Subjt:  LNQLEMERKRVEELNKLRKSS

O80807 Agamous-like MADS-box protein AGL231.2e-1949.12Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNL
        ++++ GR+KVE+VKM  ESNLQ+TFSK    LFKKASE CTLC A+IA+I+FSP  KVFSFGHP V+ L++ F       ++T  L  ++   +V+ LN 
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNL

Query:  QMTQVLNQLEMERK
          T+V  ++E E+K
Subjt:  QMTQVLNQLEMERK

Q4PSU4 Agamous-like MADS-box protein AGL615.8e-2751.97Show/hide
Query:  KMRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLN
        K +ES GRQK+ MVK+  ES+ Q+TFSK    LFKKASELCTLCGAEI II+FSP KK FSFGHP VE++++R+V+RN  S +  Q +     A+  +LN
Subjt:  KMRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
        +Q+T +L+++E E+K+ + + ++RK S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

Q9FKK2 Agamous-like MADS-box protein AGL621.4e-3357.36Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRN---PPSSSTLQLIGAHWNANVRK
        +++S+GRQK+EMVKM NESNLQ+TFSK    LFKKASELCTLCGAE+AI++FSPG+KVFSFGHP V+++I+RF+  N   P   + +QL     N+ V+ 
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRN---PPSSSTLQLIGAHWNANVRK

Query:  LNLQMTQVLNQLEMERKRVEELNKLRKSS
        LN  +TQVL+QLE E+K+ +EL K+R+ +
Subjt:  LNLQMTQVLNQLEMERKRVEELNKLRKSS

Q9LMM8 Agamous-like MADS-box protein AGL281.2e-1945.76Show/hide
Query:  RESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQ
        R++ GR+K+E+VKM NESNLQ+TFSK    LFKK SELCTLC AEIAII+FSP  K +SFGHP V  L++  + R    ++T     +     ++ LN  
Subjt:  RESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQ

Query:  MTQVLNQLEMERKRVEEL
        +T+V+ + E E++  + +
Subjt:  MTQVLNQLEMERKRVEEL

Arabidopsis top hitse value%identityAlignment
AT1G01530.1 AGAMOUS-like 288.3e-2145.76Show/hide
Query:  RESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQ
        R++ GR+K+E+VKM NESNLQ+TFSK    LFKK SELCTLC AEIAII+FSP  K +SFGHP V  L++  + R    ++T     +     ++ LN  
Subjt:  RESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQ

Query:  MTQVLNQLEMERKRVEEL
        +T+V+ + E E++  + +
Subjt:  MTQVLNQLEMERKRVEEL

AT1G65360.1 AGAMOUS-like 238.3e-2149.12Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNL
        ++++ GR+KVE+VKM  ESNLQ+TFSK    LFKKASE CTLC A+IA+I+FSP  KVFSFGHP V+ L++ F       ++T  L  ++   +V+ LN 
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNL

Query:  QMTQVLNQLEMERK
          T+V  ++E E+K
Subjt:  QMTQVLNQLEMERK

AT2G24840.1 AGAMOUS-like 614.1e-2851.97Show/hide
Query:  KMRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLN
        K +ES GRQK+ MVK+  ES+ Q+TFSK    LFKKASELCTLCGAEI II+FSP KK FSFGHP VE++++R+V+RN  S +  Q +     A+  +LN
Subjt:  KMRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLN

Query:  LQMTQVLNQLEMERKRVEELNKLRKSS
        +Q+T +L+++E E+K+ + + ++RK S
Subjt:  LQMTQVLNQLEMERKRVEELNKLRKSS

AT4G36590.1 MADS-box transcription factor family protein2.2e-2651.91Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPS------SSTLQLIGAHWNAN
        +R ++GRQK+EM KM NESNLQ+TFSK    LFKKASELCTL GAEI +I+FSPG KVFSFGHP V+ LI RF   N  S      ++ LQL+    + N
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPS------SSTLQLIGAHWNAN

Query:  VRKLNLQMTQVLNQLEMERKRVEELNKLRKS
        ++ LN  +T+VL   E E+++   L+ L++S
Subjt:  VRKLNLQMTQVLNQLEMERKRVEELNKLRKS

AT5G60440.1 AGAMOUS-like 621.0e-3457.36Show/hide
Query:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRN---PPSSSTLQLIGAHWNANVRK
        +++S+GRQK+EMVKM NESNLQ+TFSK    LFKKASELCTLCGAE+AI++FSPG+KVFSFGHP V+++I+RF+  N   P   + +QL     N+ V+ 
Subjt:  MRESRGRQKVEMVKMPNESNLQITFSK----LFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRN---PPSSSTLQLIGAHWNANVRK

Query:  LNLQMTQVLNQLEMERKRVEELNKLRKSS
        LN  +TQVL+QLE E+K+ +EL K+R+ +
Subjt:  LNLQMTQVLNQLEMERKRVEELNKLRKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGATGAGGGAGAGCAGAGGCAGGCAAAAGGTGGAGATGGTGAAGATGCCTAATGAGAGCAATCTTCAGATAACCTTTTCGAAGCTCTTCAAGAAAGCTAGTGAACTCTG
CACGCTATGCGGTGCCGAGATTGCCATCATCATCTTCTCGCCCGGGAAGAAGGTGTTCTCTTTTGGCCACCCTTGTGTCGAGGCATTGATCGAGCGTTTTGTGACTCGAA
ACCCCCCGTCGAGCTCGACACTCCAGTTGATTGGGGCTCATTGGAATGCCAACGTTCGAAAACTAAATTTGCAGATGACACAAGTGCTGAATCAACTGGAGATGGAGCGA
AAGCGGGTCGAAGAATTAAACAAGTTGCGAAAGTCAAGC
mRNA sequenceShow/hide mRNA sequence
AAGATGAGGGAGAGCAGAGGCAGGCAAAAGGTGGAGATGGTGAAGATGCCTAATGAGAGCAATCTTCAGATAACCTTTTCGAAGCTCTTCAAGAAAGCTAGTGAACTCTG
CACGCTATGCGGTGCCGAGATTGCCATCATCATCTTCTCGCCCGGGAAGAAGGTGTTCTCTTTTGGCCACCCTTGTGTCGAGGCATTGATCGAGCGTTTTGTGACTCGAA
ACCCCCCGTCGAGCTCGACACTCCAGTTGATTGGGGCTCATTGGAATGCCAACGTTCGAAAACTAAATTTGCAGATGACACAAGTGCTGAATCAACTGGAGATGGAGCGA
AAGCGGGTCGAAGAATTAAACAAGTTGCGAAAGTCAAGC
Protein sequenceShow/hide protein sequence
KMRESRGRQKVEMVKMPNESNLQITFSKLFKKASELCTLCGAEIAIIIFSPGKKVFSFGHPCVEALIERFVTRNPPSSSTLQLIGAHWNANVRKLNLQMTQVLNQLEMER
KRVEELNKLRKSS