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MC10g1077 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1077
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTCP family transcription factor
Genome locationMC10:11505887..11506001
RNA-Seq ExpressionMC10g1077
SyntenyMC10g1077
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8723131.1 Transcription factor TCP20 [Hibiscus syriacus]8.76e-0871.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
MBA0812400.1 hypothetical protein [Gossypium harknessii]1.55e-0771.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
VVB02426.1 unnamed protein product [Arabis nemorensis]9.26e-0869.05Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +++M AL AARIFQLTH     S+GETI WLL+QAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
XP_020583243.1 transcription factor TCP15-like [Phalaenopsis equestris]1.63e-0766.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AAR+FQLTH     S+GETI+WLLQQAEP+IIA+
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
XP_042517401.1 transcription factor TCP20-like [Macadamia integrifolia]9.94e-0873.81Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      SEGETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
TrEMBL top hitse value%identityAlignment
A0A1D6ZNG4 TCP transcription factor7.90e-0866.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AAR+FQLTH     S+GETI+WLLQQAEP+IIA+
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
A0A565BLE8 TCP domain-containing protein4.48e-0869.05Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +++M AL AARIFQLTH     S+GETI WLL+QAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
A0A6A3C543 Transcription factor TCP204.24e-0871.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
A0A7C9DT17 TCP domain-containing protein (Fragment)7.31e-0871.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
A0A7J9HRA5 TCP domain-containing protein (Fragment)7.51e-0871.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
SwissProt top hitse value%identityAlignment
A2YXQ1 Transcription factor PCF21.3e-0666.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M A  AARIFQLT      S+GETIRWLLQQ+EP+IIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
Q6ZBH6 Transcription factor PCF21.3e-0666.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M A  AARIFQLT      S+GETIRWLLQQ+EP+IIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
Q93Z00 Transcription factor TCP144.4e-0766.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AAR+FQLT      S+GETI WLLQQAEPS+IAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
Q9C518 Transcription factor TCP89.9e-0764.29Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AAR+FQLT      S+GETI WLLQQAEP+I+AA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
Q9LSD5 Transcription factor TCP202.0e-0771.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
Arabidopsis top hitse value%identityAlignment
AT1G58100.1 TCP family transcription factor7.0e-0864.29Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AAR+FQLT      S+GETI WLLQQAEP+I+AA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
AT1G69690.1 TCP family transcription factor1.2e-0761.9Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M A+ AAR+FQLT      S+GETI WLLQQAEP++IAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
AT2G37000.1 TCP family transcription factor1.6e-0766.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        ++ M AL AARIFQLT      +EGETI WLL QAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 201.4e-0871.43Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AARIFQLT      S+GETI+WLLQQAEPSIIAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 143.2e-0866.67Show/hide
Query:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA
        +I+M AL AAR+FQLT      S+GETI WLLQQAEPS+IAA
Subjt:  KIQMSALFAARIFQLTH-----SEGETIRWLLQQAEPSIIAA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATTCAGATGTCGGCGCTTTTCGCCGCCAGGATATTCCAATTGACCCACTCCGAAGGCGAAACCATCCGGTGGCTGCTGCAGCAGGCGGAGCCCTCGATCATCGCCGC
C
mRNA sequenceShow/hide mRNA sequence
AAAATTCAGATGTCGGCGCTTTTCGCCGCCAGGATATTCCAATTGACCCACTCCGAAGGCGAAACCATCCGGTGGCTGCTGCAGCAGGCGGAGCCCTCGATCATCGCCGC
C
Protein sequenceShow/hide protein sequence
KIQMSALFAARIFQLTHSEGETIRWLLQQAEPSIIAA