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MC10g1119 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1119
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC10:13249712..13249912
RNA-Seq ExpressionMC10g1119
SyntenyMC10g1119
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057970.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]4.45e-2476.12Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G ++AL+D+E+EEKEHS+MY+SEKL LAFGLLNSPLDCTLRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

XP_004138309.2 pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus]1.34e-2479.1Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G ++AL+DIE+EEKEHSVMY+SEKL LAFGLLNSPLDCTLRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

XP_016901378.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis melo]4.37e-2476.12Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G ++AL+D+E+EEKEHS+MY+SEKL LAFGLLNSPLDCTLRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

XP_022134759.1 pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia]1.03e-2482.09Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        +KLKANGYIT TG+  ALFDIEEEEKEH VMY+SEKL LAFGLLNSPLDC LRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

XP_023003968.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima]8.37e-2477.61Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G +++LFDIE+EEKEHSVMY+SEKL LAFGLLNSPLDCTLRIVK LRIC   HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

TrEMBL top hitse value%identityAlignment
A0A0A0LUK8 DYW_deaminase domain-containing protein6.50e-2579.1Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G ++AL+DIE+EEKEHSVMY+SEKL LAFGLLNSPLDCTLRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

A0A1S4DZH3 pentatricopeptide repeat-containing protein At4g21065-like2.11e-2476.12Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G ++AL+D+E+EEKEHS+MY+SEKL LAFGLLNSPLDCTLRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

A0A5A7US40 Pentatricopeptide repeat-containing protein2.16e-2476.12Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G ++AL+D+E+EEKEHS+MY+SEKL LAFGLLNSPLDCTLRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

A0A6J1BZP4 pentatricopeptide repeat-containing protein At4g21065-like4.97e-2582.09Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        +KLKANGYIT TG+  ALFDIEEEEKEH VMY+SEKL LAFGLLNSPLDC LRIVK LRICL  HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

A0A6J1KY52 pentatricopeptide repeat-containing protein At4g21065-like4.05e-2477.61Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        KKLK NGY+T  G +++LFDIE+EEKEHSVMY+SEKL LAFGLLNSPLDCTLRIVK LRIC   HEF
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

SwissProt top hitse value%identityAlignment
P0C7R1 Pentatricopeptide repeat-containing protein DWY1, chloroplastic3.0e-0943.28Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        K+++  GY+  T  +  L DI+EE KE ++M++SE+L +AFG++N+P   T+R++K LRIC   H F
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

Q0WSH6 Pentatricopeptide repeat-containing protein At4g148502.3e-0948.48Show/hide
Query:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        +++A GY     ++++L+D+EEEEK   V ++SEKL LAFGLL+ PL   +RI K LRIC   H F
Subjt:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

Q8LK93 Pentatricopeptide repeat-containing protein At2g02980, chloroplastic1.1e-0843.08Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYH
        K+LK +GY+  T + +   ++ ++EKE ++ Y+SEKL + FGLLN+P   T+R+VK LR+C   H
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYH

Q9FG16 Pentatricopeptide repeat-containing protein At5g065405.6e-0846.67Show/hide
Query:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC
        K++  GY   TG   A FD++EEEKE S+  +SEKL +A+G++ +    T+RIVK LR+C
Subjt:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC

Q9SMZ2 Pentatricopeptide repeat-containing protein At4g331707.8e-1045.9Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC
        + +K  GY+  T  +  L D+EEEEKE ++ Y+SEKL +AFGLL++P    +R++K LR+C
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC

Arabidopsis top hitse value%identityAlignment
AT1G47580.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-1043.28Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        K+++  GY+  T  +  L DI+EE KE ++M++SE+L +AFG++N+P   T+R++K LRIC   H F
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein8.0e-1043.08Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYH
        K+LK +GY+  T + +   ++ ++EKE ++ Y+SEKL + FGLLN+P   T+R+VK LR+C   H
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYH

AT4G14850.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-1048.48Show/hide
Query:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF
        +++A GY     ++++L+D+EEEEK   V ++SEKL LAFGLL+ PL   +RI K LRIC   H F
Subjt:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF

AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.5e-1145.9Show/hide
Query:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC
        + +K  GY+  T  +  L D+EEEEKE ++ Y+SEKL +AFGLL++P    +R++K LR+C
Subjt:  KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein4.0e-0946.67Show/hide
Query:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC
        K++  GY   TG   A FD++EEEKE S+  +SEKL +A+G++ +    T+RIVK LR+C
Subjt:  KLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAATTGAAAGCAAATGGTTACATTACGTATACGGGCATCGAAATAGCTTTGTTTGATATTGAGGAAGAAGAGAAAGAACATTCTGTGATGTACAATAGTGAGAAACT
TGTTTTAGCTTTTGGTCTCTTAAACTCTCCTTTAGATTGCACCCTAAGGATAGTGAAAAAGCTGAGAATTTGCTTGTACTACCATGAGTTT
mRNA sequenceShow/hide mRNA sequence
AAGAAATTGAAAGCAAATGGTTACATTACGTATACGGGCATCGAAATAGCTTTGTTTGATATTGAGGAAGAAGAGAAAGAACATTCTGTGATGTACAATAGTGAGAAACT
TGTTTTAGCTTTTGGTCTCTTAAACTCTCCTTTAGATTGCACCCTAAGGATAGTGAAAAAGCTGAGAATTTGCTTGTACTACCATGAGTTT
Protein sequenceShow/hide protein sequence
KKLKANGYITYTGIEIALFDIEEEEKEHSVMYNSEKLVLAFGLLNSPLDCTLRIVKKLRICLYYHEF