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MC10g1120 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1120
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNase H domain-containing protein
Genome locationMC10:13275856..13276107
RNA-Seq ExpressionMC10g1120
SyntenyMC10g1120
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4366503.1 hypothetical protein F8388_003741 [Cannabis sativa]8.40e-0740.48Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+ L AE   ++ GLK A ++   + +V SD   AI LI     +I D  N L EI  L+  FD V F    +  NL AHSLAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

KAF4400944.1 hypothetical protein G4B88_013785 [Cannabis sativa]7.85e-0740.48Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+ L AE   ++ GLK A ++   + +V SD   AI LI     +I D  N L EI  L+  FD V F    +  NL AHSLAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]3.18e-0659.18Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDE
        L PL AEIRGILE LK AAS S +RL VESD   AI+L++  L ++G+E
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.09e-2767.86Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+PLLAEIR ILEGLKFAA+S+ + LEVESDS  AIQLIR ++HT GDEQNW++EIQAL   F F+SF+H S+ CN +AH LAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]6.88e-0737.35Show/hide
Query:  TPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        TPLLA+I  I EGL  A      R+ VE+DS  A+ LI  K    G+  +W+ +I+A A+ F  + F H  +  N  A+ L +
Subjt:  TPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248743.92e-2767.86Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+PLLAEIR ILEGLKFAA+S+ + LEVESDS  AIQLIR ++HT GDEQNW++EIQAL   F F+SF+H S+ CN +AH LAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

A0A6J1DZK3 uncharacterized protein LOC1110249683.33e-0737.35Show/hide
Query:  TPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        TPLLA+I  I EGL  A      R+ VE+DS  A+ LI  K    G+  +W+ +I+A A+ F  + F H  +  N  A+ L +
Subjt:  TPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

A0A7J6F713 Uncharacterized protein4.07e-0740.48Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+ L AE   ++ GLK A ++   + +V SD   AI LI     +I D  N L EI  L+  FD V F    +  NL AHSLAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

A0A7J6I094 RNase H domain-containing protein3.80e-0740.48Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+ L AE   ++ GLK A ++   + +V SD   AI LI     +I D  N L EI  L+  FD V F    +  NL AHSLAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

A0A803NTU1 Uncharacterized protein5.64e-0741.67Show/hide
Query:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK
        L+ L AE   I+ GLK A ++   +  V SD   AI LI     +I D  N L EI  L+  FD V F    +  NL AHSLAK
Subjt:  LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGACACCGTTACTTGCTGAAATCAGAGGCATTTTGGAGGGTTTGAAATTTGCAGCCTCTTCATCTTGCTCTCGACTGGAGGTTGAGTCAGATTCATTCACGGCGATTCA
GTTAATCCGGCAGAAGCTTCACACCATTGGAGATGAACAAAATTGGCTGGTGGAGATTCAAGCCCTAGCTCAAGGATTCGATTTTGTTTCTTTTACCCACTGCTCACAGT
TTTGCAATCTCTCTGCCCATAGTTTAGCAAAA
mRNA sequenceShow/hide mRNA sequence
TTGACACCGTTACTTGCTGAAATCAGAGGCATTTTGGAGGGTTTGAAATTTGCAGCCTCTTCATCTTGCTCTCGACTGGAGGTTGAGTCAGATTCATTCACGGCGATTCA
GTTAATCCGGCAGAAGCTTCACACCATTGGAGATGAACAAAATTGGCTGGTGGAGATTCAAGCCCTAGCTCAAGGATTCGATTTTGTTTCTTTTACCCACTGCTCACAGT
TTTGCAATCTCTCTGCCCATAGTTTAGCAAAA
Protein sequenceShow/hide protein sequence
LTPLLAEIRGILEGLKFAASSSCSRLEVESDSFTAIQLIRQKLHTIGDEQNWLVEIQALAQGFDFVSFTHCSQFCNLSAHSLAK