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MC10g1189 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1189
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionacidic leucine-rich nuclear phosphoprotein 32 family member B-like
Genome locationMC10:15013168..15013650
RNA-Seq ExpressionMC10g1189
SyntenyMC10g1189
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650077.1 hypothetical protein Csa_010314 [Cucumis sativus]2.67e-3052.69Show/hide
Query:  MGFKIMVALILILLLLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQ-SPYHIP---RDTEQIRGHGDG-
        MG +IM+ LI IL+++V + +SKSSQFF    LL GSPHF+F+IFNSI+LLIT+RNH+ P PH+Q    +L   +LQ SPYH     +DTE    H D  
Subjt:  MGFKIMVALILILLLLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQ-SPYHIP---RDTEQIRGHGDG-

Query:  --DGDGDGNSDE--------DEEVDDESETEQFEEEEGEE----------EEEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI
          D DGD N+D+        +++V DE E ++++E+EGE+          EEEE+EELE RIEEFIAKVNKRWREE LRD LLIQI
Subjt:  --DGDGDGNSDE--------DEEVDDESETEQFEEEEGEE----------EEEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI

KAG6596831.1 General transcription and DNA repair factor IIH subunit TFB5, partial [Cucurbita argyrosperma subsp. sororia]2.68e-1038.46Show/hide
Query:  MGFKIMVALILILL---------LLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDTEQIRG
        MG +IMV L+ ++          ++V + +SKSSQFF+S+ LL GSPHFMF+IFNSI+LLI V  H PP PHQ             SPYHI + +  +  
Subjt:  MGFKIMVALILILL---------LLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDTEQIRG

Query:  HGD--------------GDGDGDGNS----------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAK
        + +              GD + + N+                +EDE+VDDE+ET + +EE+       ++ELEKRIEEFIAK
Subjt:  HGD--------------GDGDGDGNS----------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAK

KAG7028360.1 RNA polymerase II transcription factor B subunit 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.07e-1841.5Show/hide
Query:  MGFKIMVALILILL----------LLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDTEQIR
        MG +IMV L+ ++           ++V + +SKSSQFF+S+ LL GSPHFMF+IFNSI+LLI V  H PP PHQ             SPYHI + +  + 
Subjt:  MGFKIMVALILILL----------LLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDTEQIR

Query:  GHGD--------------GDGDGDGNS----------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQ
         + +              GD + + N+                +EDE+VDDE+ET + +EE+       ++ELEKRIEEFIAKVNKRWREE L+D LL Q
Subjt:  GHGD--------------GDGDGDGNS----------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQ

XP_023005569.1 acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucurbita maxima]1.32e-1741.09Show/hide
Query:  MGFKIMVALILILLL-----LVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDT---EQIRGH
        MG +IMV L+ ++       +V + +SKSSQ F+SS LL GSPHFMF+IFNSI+LLI V  H+PP              L QSPYHI + +   E  +G+
Subjt:  MGFKIMVALILILLL-----LVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDT---EQIRGH

Query:  ---------------GDGDGDGDGNS-------------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLL
                        D D + + +S                   +EDE+VDDE +TE+ +E++       ++ELEKRIEEFIAKVNKRWREE LRD L 
Subjt:  ---------------GDGDGDGDGNS-------------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLL

Query:  IQ
         Q
Subjt:  IQ

XP_038876855.1 glutamic acid-rich protein-like [Benincasa hispida]6.45e-2550.82Show/hide
Query:  MGFKIMVALILILLLLV-WVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDT------EQIRGHG
        MG +IMV L+ IL++++ WVTS KSSQ F+SSHL + SPH +F+IFNSI+LLIT+RNH+P  P +Q    +L  +L  SPYH P         +Q     
Subjt:  MGFKIMVALILILLLLV-WVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDT------EQIRGHG

Query:  DGDGDGDGN------SDEDEEVDDESETEQFEEEEGEEE---------EEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI
        + D D D N      +++++E +DE E +Q  E+E E+E         EEE+EELEKRIEEFIAKVNKRWREE LRD LLIQI
Subjt:  DGDGDGDGN------SDEDEEVDDESETEQFEEEEGEEE---------EEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI

TrEMBL top hitse value%identityAlignment
A0A0A0L728 Uncharacterized protein5.45e-1148.87Show/hide
Query:  VRNHKPPSPHQQNLESQLHPSLLQ-SPYHIP---RDTEQIRGHGDG---DGDGDGNSDE--------DEEVDDESETEQFEEEEGEE----------EEE
        +RNH+ P PH+Q    +L   +LQ SPYH     +DTE    H D    D DGD N+D+        +++V DE E ++++E+EGE+          EEE
Subjt:  VRNHKPPSPHQQNLESQLHPSLLQ-SPYHIP---RDTEQIRGHGDG---DGDGDGNSDE--------DEEVDDESETEQFEEEEGEE----------EEE

Query:  ENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI
        E+EELE RIEEFIAKVNKRWREE LRD LLIQI
Subjt:  ENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI

A0A5D3D7D0 Uncharacterized protein5.48e-1048.84Show/hide
Query:  VRNHKPPS-PHQQN--LESQLHPSLLQSPYHIPRDTEQIRGHGDGDGDGDGNSD--------EDEEVDD-ESETEQFEEEEGEE---------EEEENEE
        +RNH+ P  PH+Q   ++ QL   L  SPYH     +  R   D DGD     D        ED+ + D E E ++++E+EGEE         EEEE+EE
Subjt:  VRNHKPPS-PHQQN--LESQLHPSLLQSPYHIPRDTEQIRGHGDGDGDGDGNSD--------EDEEVDD-ESETEQFEEEEGEE---------EEEENEE

Query:  LEKRIEEFIAKVNKRWREEMLRDKLLIQI
        LEKRIEEFIAKVNKRWREE LRD LLIQI
Subjt:  LEKRIEEFIAKVNKRWREEMLRDKLLIQI

A0A6J1KZL9 acidic leucine-rich nuclear phosphoprotein 32 family member B-like6.39e-1841.09Show/hide
Query:  MGFKIMVALILILLL-----LVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDT---EQIRGH
        MG +IMV L+ ++       +V + +SKSSQ F+SS LL GSPHFMF+IFNSI+LLI V  H+PP              L QSPYHI + +   E  +G+
Subjt:  MGFKIMVALILILLL-----LVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDT---EQIRGH

Query:  ---------------GDGDGDGDGNS-------------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLL
                        D D + + +S                   +EDE+VDDE +TE+ +E++       ++ELEKRIEEFIAKVNKRWREE LRD L 
Subjt:  ---------------GDGDGDGDGNS-------------------DEDEEVDDESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLL

Query:  IQ
         Q
Subjt:  IQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCAAAATTATGGTGGCATTGATACTTATATTGCTGCTTCTTGTGTGGGTGACATCATCAAAATCATCTCAATTTTTTGTAAGTTCTCATCTTTTATTGGGCAG
TCCTCATTTTATGTTCACAATCTTCAACTCCATAGTTCTTCTCATAACTGTGAGAAACCACAAGCCACCATCACCTCATCAACAAAACCTTGAGAGCCAACTTCATCCTT
CTCTGCTTCAATCTCCCTATCATATCCCACGAGACACCGAACAAATTCGTGGCCATGGCGATGGCGATGGCGATGGCGATGGCAATTCAGACGAAGATGAGGAAGTTGAT
GATGAAAGTGAAACCGAGCAATTCGAGGAGGAGGAGGGAGAGGAAGAGGAGGAGGAAAATGAGGAATTGGAGAAGAGGATAGAAGAGTTCATAGCTAAGGTGAACAAGAG
ATGGAGAGAAGAAATGTTGAGAGACAAACTGCTCATTCAAATT
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTCAAAATTATGGTGGCATTGATACTTATATTGCTGCTTCTTGTGTGGGTGACATCATCAAAATCATCTCAATTTTTTGTAAGTTCTCATCTTTTATTGGGCAG
TCCTCATTTTATGTTCACAATCTTCAACTCCATAGTTCTTCTCATAACTGTGAGAAACCACAAGCCACCATCACCTCATCAACAAAACCTTGAGAGCCAACTTCATCCTT
CTCTGCTTCAATCTCCCTATCATATCCCACGAGACACCGAACAAATTCGTGGCCATGGCGATGGCGATGGCGATGGCGATGGCAATTCAGACGAAGATGAGGAAGTTGAT
GATGAAAGTGAAACCGAGCAATTCGAGGAGGAGGAGGGAGAGGAAGAGGAGGAGGAAAATGAGGAATTGGAGAAGAGGATAGAAGAGTTCATAGCTAAGGTGAACAAGAG
ATGGAGAGAAGAAATGTTGAGAGACAAACTGCTCATTCAAATT
Protein sequenceShow/hide protein sequence
MGFKIMVALILILLLLVWVTSSKSSQFFVSSHLLLGSPHFMFTIFNSIVLLITVRNHKPPSPHQQNLESQLHPSLLQSPYHIPRDTEQIRGHGDGDGDGDGNSDEDEEVD
DESETEQFEEEEGEEEEEENEELEKRIEEFIAKVNKRWREEMLRDKLLIQI