; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g1219 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1219
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationMC10:15424051..15424382
RNA-Seq ExpressionMC10g1219
SyntenyMC10g1219
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]2.02e-1752.08Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHPF-GHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH F GHID ++    K+ S +  L T SE    +L+W  R + LITLIN TLS S   H VGS
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHPF-GHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS

KGN50818.1 hypothetical protein Csa_018838 [Cucumis sativus]1.30e-1752.63Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAH-PFGHIDSSVSVLEKNRSWARALKT--VSESFLKWSPRDRTLITLINVTLSPSTFGHTVGS
        +FLLSNICN V +RLDS+N+   ++ V +ILKAH  FGHID S S   K  S      T   S   L W  RD+ LITLIN TLSPS   H VGS
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAH-PFGHIDSSVSVLEKNRSWARALKT--VSESFLKWSPRDRTLITLINVTLSPSTFGHTVGS

TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.35e-1752.08Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH  FGHID ++    K+   +  L T SE    +L+W  RD+ LITLIN TLS S   H VGS
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS

TYK08059.1 retrotransposon protein [Cucumis melo var. makuwa]1.54e-1746Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKN--RSWARALKTVSESFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQR
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH  FGHID ++    K+   S       ++  +L+W  RD+ LITLIN TLS S   H V S + ++
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKN--RSWARALKTVSESFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQR

TYK11141.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.55e-1846.43Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQ
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH  FGHID ++    K+ S +  L+T SE    +++W  RD+ LITLIN TLS S   H VGS   +
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQ

Query:  RIVIISKKFIAS
         + +  +K  +S
Subjt:  RIVIISKKFIAS

TrEMBL top hitse value%identityAlignment
A0A0A0KMJ5 Uncharacterized protein6.30e-1852.63Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAH-PFGHIDSSVSVLEKNRSWARALKT--VSESFLKWSPRDRTLITLINVTLSPSTFGHTVGS
        +FLLSNICN V +RLDS+N+   ++ V +ILKAH  FGHID S S   K  S      T   S   L W  RD+ LITLIN TLSPS   H VGS
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAH-PFGHIDSSVSVLEKNRSWARALKT--VSESFLKWSPRDRTLITLINVTLSPSTFGHTVGS

A0A5A7VGG0 Retrotransposon protein9.76e-1852.08Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHPF-GHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH F GHID ++    K+ S +  L T SE    +L+W  R + LITLIN TLS S   H VGS
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHPF-GHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS

A0A5D3BEU0 Putative mitochondrial protein1.14e-1752.08Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH  FGHID ++    K+   +  L T SE    +L+W  RD+ LITLIN TLS S   H VGS
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGS

A0A5D3CCL2 Retrotransposon protein7.47e-1846Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKN--RSWARALKTVSESFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQR
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH  FGHID ++    K+   S       ++  +L+W  RD+ LITLIN TLS S   H V S + ++
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKN--RSWARALKTVSESFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQR

A0A5D3CH60 Putative mitochondrial protein1.23e-1846.43Show/hide
Query:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQ
        +FLLSNICNLV +RLDS+N+  W++ V +ILKAH  FGHID ++    K+ S +  L+T SE    +++W  RD+ LITLIN TLS S   H VGS   +
Subjt:  IFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHP-FGHIDSSVSVLEKNRSWARALKTVSE---SFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQ

Query:  RIVIISKKFIAS
         + +  +K  +S
Subjt:  RIVIISKKFIAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTATTTTCTTACTTTCTAATATTTGTAATTTGGTTTTAGTGAGGTTGGATTCCTCTAATTTTGGATCTTGGAGATTTAATGTGGTTGCAATCTTGAAGGCTCACCCCTT
TGGACATATTGACAGTTCAGTTTCAGTACTAGAAAAAAATCGTTCTTGGGCTAGAGCTCTAAAAACTGTCAGTGAAAGTTTCCTCAAATGGAGCCCACGTGACCGGACCT
TAATCACTCTAATTAACGTGACTCTTTCTCCGTCTACCTTTGGTCACACTGTTGGCTCTTCTTTCCCGCAAAGAATTGTGATTATTTCTAAAAAATTTATTGCCTCG
mRNA sequenceShow/hide mRNA sequence
CCTATTTTCTTACTTTCTAATATTTGTAATTTGGTTTTAGTGAGGTTGGATTCCTCTAATTTTGGATCTTGGAGATTTAATGTGGTTGCAATCTTGAAGGCTCACCCCTT
TGGACATATTGACAGTTCAGTTTCAGTACTAGAAAAAAATCGTTCTTGGGCTAGAGCTCTAAAAACTGTCAGTGAAAGTTTCCTCAAATGGAGCCCACGTGACCGGACCT
TAATCACTCTAATTAACGTGACTCTTTCTCCGTCTACCTTTGGTCACACTGTTGGCTCTTCTTTCCCGCAAAGAATTGTGATTATTTCTAAAAAATTTATTGCCTCG
Protein sequenceShow/hide protein sequence
PIFLLSNICNLVLVRLDSSNFGSWRFNVVAILKAHPFGHIDSSVSVLEKNRSWARALKTVSESFLKWSPRDRTLITLINVTLSPSTFGHTVGSSFPQRIVIISKKFIAS