CuGenDBv2

Gene ID	MC10g1260
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	MC10:16023282..16025759
RNA-Seq Expression	MC10g1260
Synteny	MC10g1260
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

1.69e-141

85.33

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-
        SSMALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGIS   A VAVET V+ KDPEP E ESLA G NGSVAAAEEV 
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-

Query:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
        EVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
Subjt:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG

Query:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

1.08e-141

83.97

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGIS---AAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAA
        SSMALFSP SH ST SPS  H THFSF  F SLRTRNP+ +     TIRA ADNGAGIS   A V+VET V+ KDPEP     EEQESLA G NGSVAAA
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGIS---AAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAA

Query:  EEV-EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEV EVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  EEV-EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

7.16e-144

85.33

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-
        SSMALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGIS   A VAVET V+ KDPEP E ESLA G NGSVAAAEEV 
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-

Query:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
        EVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
Subjt:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG

Query:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

XP_022155552.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica charantia]

1.08e-177

100

Show/hide

Query:  MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFE
        MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFE
Subjt:  MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFE

Query:  DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM
        DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM
Subjt:  DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM

Query:  GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
        GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
Subjt:  GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

1.16e-147

86.1

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT---TIRAAADNGAGIS---AAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAAEE
        SSMALFSP SH STLSPSS HRTHFSF  F SLRTRNP+ +   TIRA ADNGAGIS   AAVAVET V+ KDPEP     EEQESLA G NGSVAAAEE
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT---TIRAAADNGAGIS---AAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAAEE

Query:  VEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
        VEVVSKFEDPKW+NGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
Subjt:  VEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT

Query:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS
        GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDE S
Subjt:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

5.23e-142

83.97

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGIS---AAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAA
        SSMALFSP SH ST SPS  H THFSF  F SLRTRNP+ +     TIRA ADNGAGIS   A V+VET V+ KDPEP     EEQESLA G NGSVAAA
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT-----TIRAAADNGAGIS---AAVAVETAVQPKDPEP-----EEQESLAAGANGSVAAA

Query:  EEV-EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EEV EVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  EEV-EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETS

A0A1S3BLD8 uncharacterized protein LOC103490842

3.47e-144

85.33

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-
        SSMALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGIS   A VAVET V+ KDPEP E ESLA G NGSVAAAEEV 
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-

Query:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
        EVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
Subjt:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG

Query:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

A0A5A7TG76 Uncharacterized protein

8.20e-142

85.33

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-
        SSMALFSP SH STLSPSS H THFSF  F SLRTRNP+ +      TIRA ADNGAGIS   A VAVET V+ KDPEP E ESLA G NGSVAAAEEV 
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFT------TIRAAADNGAGIS---AAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEV-

Query:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
        EVVSKFEDPKWVNGTWDL QF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG
Subjt:  EVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTG

Query:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDETS+
Subjt:  VGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

A0A6J1DPN2 light-harvesting complex-like protein 3 isotype 1, chloroplastic

5.25e-178

100

Show/hide

Query:  MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFE
        MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFE
Subjt:  MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFE

Query:  DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM
        DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM
Subjt:  DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM

Query:  GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
        GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK
Subjt:  GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKK

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

3.00e-138

Show/hide

Query:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISA-AVAVETAVQPKDPEP--EEQESLAAGANGSVAAAEEVEVVSKFE
        SSMALFSPPS  S+LSPSS HRTHF    F SLR+RNP+      AADNGAGIS  +VAVE AV  KDPEP  E++ESLA   NGSVAA EEV VVSKFE
Subjt:  SSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISA-AVAVETAVQPKDPEP--EEQESLAAGANGSVAAAEEVEVVSKFE

Query:  DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM
        DPKWVNGTWDL QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPV+F++SI+PWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSLTGVGLVGQM
Subjt:  DPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQM

Query:  GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDET
        GNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDET
Subjt:  GNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDET

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

3.8e-73

58.14

Show/hide

Query:  SSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVE
        S SMALFSPP   S  +P+   +   S      L T+  +  ++ RA++DNG           A+VAVE    P     E   +   GA G  A     E
Subjt:  SSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVE

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
         V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVF++SIIPWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        GLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W++  S+
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.5e-74

58.82

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E
        MALFSPP   S+L  +      FSF+   S   R    +  RA++D+G+   +AAV+VE          +P    P  ++   A A       EE+   E
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
         V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+F++SIIPWWAWIKRYHLPEAELLNGRAAM+GFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE
        GLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W+++
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

1.1e-75

58.82

Show/hide

Query:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E
        MALFSPP   S+L  +      FSF+   S   R    +  RA++D+G+   +AAV+VE          +P    P  ++   A A       EE+   E
Subjt:  MALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGA-GISAAVAVET-------AVQPKDPEPEEQESLAAGANGSVAAAEEV---E

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
         V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+F++SIIPWWAWIKRYHLPEAELLNGRAAM+GFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE
        GLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W+++
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDE

AT5G47110.1 Chlorophyll A-B binding family protein

2.7e-74

58.14

Show/hide

Query:  SSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVE
        S SMALFSPP   S  +P+   +   S      L T+  +  ++ RA++DNG           A+VAVE    P     E   +   GA G  A     E
Subjt:  SSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTI-RAAADNGAGI-------SAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVE

Query:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
         V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVF++SIIPWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA
        GLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W++  S+
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCCTCTTCCATGGCCTTGTTTTCTCCTCCATCCCATTTCTCTACGCTCTCTCCCTCTTCGACCCACAGAACCCACTTCTCCTTCACGGCCTTCCCATCTCTCCG
AACCAGAAACCCCACTTTCACCACCATCAGGGCCGCTGCTGACAATGGCGCCGGAATTTCAGCTGCCGTTGCTGTAGAAACCGCCGTCCAACCGAAGGATCCAGAGCCGG
AAGAGCAGGAGAGCCTCGCTGCCGGTGCTAATGGGTCCGTGGCGGCTGCCGAAGAAGTGGAGGTGGTGAGCAAATTTGAAGACCCCAAGTGGGTTAATGGGACTTGGGAT
TTGACTCAGTTTCGGAAAGATGGAAGTACCGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGAAAATGGCTGGAAAACAATCCAGAATCATCAAGCAATGAAGA
CCCCGTAGTATTTGAATCATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTACTCAATGGCCGTGCGGCCATGGTGGGGTTCTTCA
TGGCTTACTTTGTTGATAGCTTGACTGGGGTGGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGA
AAGAATGAAGATATAGAGACTATAAAGAGGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGCCAAAAAGTAA

mRNA sequence

Show/hide mRNA sequence

CGCTGAACACCTCTACCATTAAAATCTAGAGTATAAACTTGTAATTTAACCCTAAATAGTAATAGTTTATTTATACAAATTATATTAGAAAAGTGACAAGTGACAAGTGA
CAAGTGCCATAGCTTCCCCATCCATCATAATTCCAAGGCTGAGGATAGCTCACAAGAAGAAGAGGAACACTCTCCAGTCTCCTGCAGAGCAATGTCTTCCTCTTCCATGG
CCTTGTTTTCTCCTCCATCCCATTTCTCTACGCTCTCTCCCTCTTCGACCCACAGAACCCACTTCTCCTTCACGGCCTTCCCATCTCTCCGAACCAGAAACCCCACTTTC
ACCACCATCAGGGCCGCTGCTGACAATGGCGCCGGAATTTCAGCTGCCGTTGCTGTAGAAACCGCCGTCCAACCGAAGGATCCAGAGCCGGAAGAGCAGGAGAGCCTCGC
TGCCGGTGCTAATGGGTCCGTGGCGGCTGCCGAAGAAGTGGAGGTGGTGAGCAAATTTGAAGACCCCAAGTGGGTTAATGGGACTTGGGATTTGACTCAGTTTCGGAAAG
ATGGAAGTACCGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGAAAATGGCTGGAAAACAATCCAGAATCATCAAGCAATGAAGACCCCGTAGTATTTGAATCA
TCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTACTCAATGGCCGTGCGGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAG
CTTGACTGGGGTGGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATATAGAGA
CTATAAAGAGGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGCCAAAAAGTAATATAGAACATAGTTGTCTTGTCTG
TTCTTGTTTTTAATTAATTTATGTTTGTGTTCTGTAAGAATTGAGCTAAGTAGAGAAGGAGGATAATATGTGAGCTCTGAAAGATATTGAATTTTAGGCCTCAGATTTTT
ATTAATGTTAGGATTTCTTTCTTCAATGAAAATGTCTCTCTATAATTATTGGTTTTTCTGGAAATATGATTGACAAGGTTCATATTTTCTGATGAACTTTATCAGAATAC
CAAAATCCAGTTTGAATTTGATTTATGTTCATATATATATATTTATATGGGTAATTATATTTGTTTGTTCTTGAATTTTAAGTTATTATGATTTAGATCTCAGGAGTTTT
AAAAAATAATTCAAAATGGTCTCTATCATTTCATTAATTTTCAAAATCTTCCATTAGTTCATGATAAGCTACTTTGACATAAAGATATGTATTTTTGTCTTGATACGCGA
CTGTCCTTCTACATTTAAAAAATCTTT

Protein sequence

Show/hide protein sequence

MSSSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANGSVAAAEEVEVVSKFEDPKWVNGTWD
LTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIR
KNEDIETIKRLIDETTFYDKQWQATWQDETSAKK

MC10g1260 (gene) of Bitter gourd (Dali-11) v1 genome