CuGenDBv2

Gene ID	MC10g1277
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	poly(U)-specific endoribonuclease-B-like
Genome location	MC10:16185385..16190211
RNA-Seq Expression	MC10g1277
Synteny	MC10g1277
Gene Ontology terms	GO:0032259 - methylation (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0004521 - endoribonuclease activity (molecular function) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR018998 - EndoU ribonuclease, C-terminal IPR037227 - Endoribonuclease EndoU-like IPR039787 - Poly(U)-specific endoribonuclease

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7030180.1 Poly(U)-specific endoribonuclease-B [Cucurbita argyrosperma subsp. argyrosperma]

6.87e-273

84.67

Show/hide

Query:  MEGLIKGVLDIALGHDD-NRDEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEH
        MEGLIKG++D+A+GHDD N +E+SA QSRDERSRSTWAQVV+GEEDA         DR+ G   NRRD+E+EGRSRR+EWEV+GSRISGQRQQGEY SEH
Subjt:  MEGLIKGVLDIALGHDD-NRDEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEH

Query:  GHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGK
        G+NR+ WA +E SEE NDGWETVHKK PR+ HKVQ++NW GYKRP SEQNYSDEVEVGAELEPSEDELAD +RACNKLWELDLNRLVPG+DYEIDCGEGK
Subjt:  GHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGK

Query:  RVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLY
        RV GREDMA+  LFSWVSED FRKPTFSRFCSLLDNYNPDQGS+E+VT EE+QEQAAF+EEISRTAPIKYLHKYLS  GVT NDYQDFKR+LTSLWFDLY
Subjt:  RVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLY

Query:  GRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLC
        GRGGTS SSSAFEHVFVGEIKQ+G QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQFPDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFELALYTLC
Subjt:  GRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLC

Query:  FFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES
        FFLGGEDNHVELGPYP+NIKCYRLGNKIGSVFPVAES
Subjt:  FFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES

XP_004147247.1 poly(U)-specific endoribonuclease-B isoform X1 [Cucumis sativus]

1.78e-273

85.28

Show/hide

Query:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA
        MEGLIKG++D+A+G+D DN D++S  QSR++RSRSTWAQVV+GEED GDRR GY  NRR++EEEGRSRR+EWEVE SRISGQR+Q EY SEHG+NRN WA
Subjt:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA

Query:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM
         EE SEEKNDGWETVHKKP RR+HKVQ DNWGGYKRP SEQNYSDEVEVGAELEPSEDELADLS ACNKLW+LDLNRLVPGKDYEIDCGEGKRVSGREDM
Subjt:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM

Query:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS
        A+G LFSWVSE+  RKPTFSRFCSLLDNYNP+QGS+E+VT EERQEQAAF+EEISRTAPIKYLHKYLSS GV  N+YQDFKR+LTSLWFDLYGRGGT GS
Subjt:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS

Query:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN
        SSAFEHVFVGEIKQ+G+QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQ PDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFE+ALYTLCFFLGGEDN
Subjt:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN

Query:  HVELGPYPINIKCYRLGNKIGSVFPVAE
        HVELGPY +NIKCYR GNK+GSVFP+AE
Subjt:  HVELGPYPINIKCYRLGNKIGSVFPVAE

XP_022155525.1 poly(U)-specific endoribonuclease-B-like [Momordica charantia]

0.0

100

Show/hide

Query:  MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWAT
        MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWAT
Subjt:  MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWAT

Query:  EEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMA
        EEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMA
Subjt:  EEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMA

Query:  EGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSS
        EGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSS
Subjt:  EGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSS

Query:  SAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH
        SAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH
Subjt:  SAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH

Query:  VELGPYPINIKCYRLGNKIGSVFPVAES
        VELGPYPINIKCYRLGNKIGSVFPVAES
Subjt:  VELGPYPINIKCYRLGNKIGSVFPVAES

XP_023539783.1 poly(U)-specific endoribonuclease-B [Cucurbita pepo subsp. pepo]

3.27e-274

Show/hide

Query:  MEGLIKGVLDIALGHDD---NRDEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQE-WEVEGSRISGQRQQGEYR
        MEGLIKG++D+A+GHDD   N +E+SAPQSRDERSRSTWAQVV+GEEDA         DRR G   NRRD+E+EGRSRR+E WEVEGSRISGQRQQGEY 
Subjt:  MEGLIKGVLDIALGHDD---NRDEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQE-WEVEGSRISGQRQQGEYR

Query:  SEHGHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCG
        SEHG+NR+ WA +EGSEE NDGWETVHKK PR+ HKVQ++NW GYKRP SEQNYSDEVEVGAELEPSEDELAD +RACNKLWELDLNRLVPG+DYEIDCG
Subjt:  SEHGHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCG

Query:  EGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWF
        EGKRV GREDMA+  LFSWV+ED FRKPTFSRFCSLLDNYNPDQGS+E+VT EERQEQAAF+EEISRTAPIKYLHKYLS  GVT NDYQDFKR+LTSLWF
Subjt:  EGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWF

Query:  DLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALY
        DLYGRGGTS SSSAFEHVFVGEIKQ+G QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQFPDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFELALY
Subjt:  DLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALY

Query:  TLCFFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES
        TLCFFLGGEDNHVELGPYP+NIKCYRLGNKIGSVFPVAES
Subjt:  TLCFFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES

XP_038904723.1 poly(U)-specific endoribonuclease-B-like [Benincasa hispida]

6.21e-274

86.01

Show/hide

Query:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA
        MEGLIKG++ +A+G+D DN D++SA QSRDERSRSTWAQVV+G+ED GDRR GY  NRRD+EEEG SRR+EWEV+GSRISGQRQQ EY  EHG+NRN W 
Subjt:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA

Query:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM
         EE SEEKNDGWETVHKKPPRR+HKVQ D+W GYKRP SEQNYSDEVEVGAELEPSEDELADLS ACNKLWELDLNRL+PGKDY+IDCGEGKRVSGREDM
Subjt:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM

Query:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS
        A+G LFSWVSED FRKPTFSRFCSLLDNYNP+QGS+E+VT EERQEQAAF+EEISRTAPIKYLHKYLSS GV P +Y+DFK LLT+LWFDLYGRGGTSGS
Subjt:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS

Query:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN
        SSAFEHVFVGEIKQRG+QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQ PDSETQLLTIQFEWNG+LKSVSSTLIGVSPEFE+ALYTLCFFLGGEDN
Subjt:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN

Query:  HVELGPYPINIKCYRLGNKIGSVFPVAES
        HV+LGPY +NIKCYRLGNKIGSVFPVAES
Subjt:  HVELGPYPINIKCYRLGNKIGSVFPVAES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6P1 XendoU domain-containing protein

8.61e-274

85.28

Show/hide

Query:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA
        MEGLIKG++D+A+G+D DN D++S  QSR++RSRSTWAQVV+GEED GDRR GY  NRR++EEEGRSRR+EWEVE SRISGQR+Q EY SEHG+NRN WA
Subjt:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA

Query:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM
         EE SEEKNDGWETVHKKP RR+HKVQ DNWGGYKRP SEQNYSDEVEVGAELEPSEDELADLS ACNKLW+LDLNRLVPGKDYEIDCGEGKRVSGREDM
Subjt:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM

Query:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS
        A+G LFSWVSE+  RKPTFSRFCSLLDNYNP+QGS+E+VT EERQEQAAF+EEISRTAPIKYLHKYLSS GV  N+YQDFKR+LTSLWFDLYGRGGT GS
Subjt:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS

Query:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN
        SSAFEHVFVGEIKQ+G+QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQ PDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFE+ALYTLCFFLGGEDN
Subjt:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN

Query:  HVELGPYPINIKCYRLGNKIGSVFPVAE
        HVELGPY +NIKCYR GNK+GSVFP+AE
Subjt:  HVELGPYPINIKCYRLGNKIGSVFPVAE

A0A1S3BLB7 poly(U)-specific endoribonuclease-B

5.54e-270

85.05

Show/hide

Query:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA
        MEGLIKG++D+A+G+D DN D++SA QSR+ERSRSTWAQVV+GEED GDRR G   NR ++EEEGRSRR+EWEVE SRISGQR+Q EY SEHG+NRN WA
Subjt:  MEGLIKGVLDIALGHD-DNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWA

Query:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM
         EEGSEEKNDGWETVHKKP RR+HK+Q DNWGGYKRP SEQNYS+EVEVGAELEPSEDELADLS AC KLW+LDLNRLVPGKDYEIDCGEGKRVSGREDM
Subjt:  TEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDM

Query:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS
        A+G LFSWVSED F KPTFSRFCSLLDNYNP+QG +E+VT EERQEQAAF+EEISRTAPIKYLH+YLSS GV  NDYQDFKR+LTSLWFDL GR GTSGS
Subjt:  AEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGS

Query:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN
        SSAFEHVFVGEIKQ+G+QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQ PDSETQLLTIQFEWNGILKSVSSTL+GVSPEFE+ALYTLCFFLGGEDN
Subjt:  SSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDN

Query:  HVELGPYPINIKCYRLGNKIGSVFPVAE
        HVELGPY +NIKCYRLGN IGSVFP+AE
Subjt:  HVELGPYPINIKCYRLGNKIGSVFPVAE

A0A6J1DMN3 poly(U)-specific endoribonuclease-B-like

0.0

100

Show/hide

Query:  MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWAT
        MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWAT
Subjt:  MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWAT

Query:  EEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMA
        EEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMA
Subjt:  EEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMA

Query:  EGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSS
        EGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSS
Subjt:  EGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSS

Query:  SAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH
        SAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH
Subjt:  SAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH

Query:  VELGPYPINIKCYRLGNKIGSVFPVAES
        VELGPYPINIKCYRLGNKIGSVFPVAES
Subjt:  VELGPYPINIKCYRLGNKIGSVFPVAES

A0A6J1F7L9 poly(U)-specific endoribonuclease-B-like

1.35e-272

84.44

Show/hide

Query:  MEGLIKGVLDIALGHDDNRD-EESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEH
        MEGLIKG++D+A+GHDD+++ E+SA QSRDERSRSTWAQVV+GEEDA         DRR G   NRRD+E+EGRSRR+EWEV+GSRISGQ+QQGEY SEH
Subjt:  MEGLIKGVLDIALGHDDNRD-EESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEH

Query:  GHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGK
        G+NR+ WA +E SEE NDGWETVHKK PR+ HKVQ++NW GYKRP SEQNYSDEVEVGAELEPSEDELAD +RACNKLWELDLNRLVPG+DYEIDCGEGK
Subjt:  GHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGK

Query:  RVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLY
        RV GREDMA+  LFSWVSED FRKPTFSRFCSLLDNYNPDQGS+E+VT EE+QEQAAF+EEISRTAPIKYLHKYLS  GVT NDYQDFKR+LTSLWFDLY
Subjt:  RVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLY

Query:  GRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLC
        GRGGTS SSSAFEHVFVGEIKQ+G QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQFPDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFELALYTLC
Subjt:  GRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLC

Query:  FFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES
        FFLGGEDNHVELGPYP+NIKCYRLGNKIGSVFPVAES
Subjt:  FFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES

A0A6J1L240 poly(U)-specific endoribonuclease-B-like

8.35e-270

83.86

Show/hide

Query:  MEGLIKGVLDIALGHDD---NRDEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQE-WEVEGSRISGQRQQGEYR
        MEGLIKG++D+A+GHDD   N +E+SAPQSRDERSRSTWAQVV+GEEDA         DRR G   NRRD+ ++GRSRR+E WEVEGSRISGQRQQGEY 
Subjt:  MEGLIKGVLDIALGHDD---NRDEESAPQSRDERSRSTWAQVVSGEEDAG--------DRRQGYAPNRRDDEEEGRSRRQE-WEVEGSRISGQRQQGEYR

Query:  SEHGHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCG
        SEHG+NR+ WA +E SEE NDGWETVHKK PR+ HKVQ++NW GYKRP SEQNYSDEVEVGAELEPSEDELAD +RACNKLWELDLNRLVPG+DYEIDCG
Subjt:  SEHGHNRNHWATEEGSEEKNDGWETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCG

Query:  EGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWF
        EGKRV GREDMA+  LFSWV+ED FRKPTFSRFCSLLDNYNPDQGS+E+VT EERQEQAAF+EEISRTAPIKYLHKYL   GV  NDYQDFKR+LTSLWF
Subjt:  EGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWF

Query:  DLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALY
        DLYGRGGTS SSSAFEHVFVGEIKQ+G QEVSGFHNWLQFYLEEAKG+VDYQGYIFPRRRGQFPDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFELALY
Subjt:  DLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALY

Query:  TLCFFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES
        TLCFFLGGEDNHVELGPYP+NIKCYRLGNKIGSVFPVAES
Subjt:  TLCFFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES

SwissProt top hits

e value

%identity

Alignment

B1H3D5 Poly(U)-specific endoribonuclease

5.8e-50

41.67

Show/hide

Query:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAEGCLFSWVSEDAFR-KPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI
        +LS+  N+LW+ D NR+  GKDY I   +GK        +   D A   LF +V E+  R + TF+ F SLLDNY  D G  E+VT EE  E   F++ I
Subjt:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAEGCLFSWVSEDAFR-KPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI

Query:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRG-GTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP
          T  +K  H YL           DFK  L ++WF LY R  G    S  FEHVFVGE K RG +E+ G HNW+QFYL+E +  +DY+GY+  R+    P
Subjt:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRG-GTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP

Query:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGED---NHVELGPYPINIKCYRLGNKIGSVFPV
        D + Q+L +QF W  ++K + S+ IGVSPEFE ALYT+ F    E      V +  Y + I   R G  IG+ +PV
Subjt:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGED---NHVELGPYPINIKCYRLGNKIGSVFPV

B1WBB4 Poly(U)-specific endoribonuclease-B

1.5e-50

42.18

Show/hide

Query:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGK------RVSGREDMAEGCLFSWVSEDAFR-KPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI
        +LS+  N+LW+ D+NR+  GKDY I   +GK      R +  +D A   LF +V E+  + K TF+ F SLLDNY  D G  E+VT EE  E   F++ I
Subjt:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGK------RVSGREDMAEGCLFSWVSEDAFR-KPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI

Query:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRG-GTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP
          T  +K  H YL           DFK  L S+WF LY R  G+   S  FEHVFVGE K RG +E+ G HNW+QFYL+E +  +DY+GY+  R+    P
Subjt:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRG-GTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP

Query:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGG---EDNHVELGPYPINIKCYRLGNKIGSVFP
        D + Q+L +QF W  ++K V S+ IGVSPEFE ALYT+ F           + L  Y + I   R G  IG+ +P
Subjt:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGG---EDNHVELGPYPINIKCYRLGNKIGSVFP

Q1LUM3 Poly(U)-specific endoribonuclease-C

1.6e-47

Show/hide

Query:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAEGCLFSWVSEDAFRK-PTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI
        +LS   N+LW+LD+NR+ P  +Y I   +GK        +   D A   LF  V E       T++RF  LLDNY    G  E VTAEE  E  +F++ I
Subjt:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAEGCLFSWVSEDAFRK-PTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI

Query:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSG-SSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP
          TA +K  H+YL   G + +D + FK  L  +WF LY R    G  SS FEHVFVGE K    +E+ G HNW+QFYL+E +  +DY+GY    R    P
Subjt:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSG-SSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP

Query:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH---VELGPYPINIKCYRLGNKIGSVFP
        D++  +L +QF W+G++K V+S  +GVSPEFE+A++T+ F    E      V L  Y + +  +R G  IG+ +P
Subjt:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNH---VELGPYPINIKCYRLGNKIGSVFP

Q503V9 Poly(U)-specific endoribonuclease-B

2.4e-56

44.49

Show/hide

Query:  DLSRACNKLWELDLNRLVPGKDYEIDC-GEGKRVSGREDMAEGC---LFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRT
        +LS    +LW+ D NRL PG DY I   G+   ++G  D ++G    LFS+V E+ F+K TF  F SLLDNY  D G  EIVT EE  E   F++ + +T
Subjt:  DLSRACNKLWELDLNRLVPGKDYEIDC-GEGKRVSGREDMAEGC---LFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRT

Query:  APIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTS-GSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSE
          +K  HKYL    ++P D   FK+ L  +WF+LY R G+S   SS FEHVFVGE   RG   V GFHNW+Q YL+E  G +DY+GY       Q PD  
Subjt:  APIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTS-GSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSE

Query:  TQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLG-GEDNHVELGPYPINIKCYRLGNK-IGSVFPV
          +L +QF W   +K   S  IGVSPEFE +LYTLCF +   E   V    Y + I C+    K IG+ +PV
Subjt:  TQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLG-GEDNHVELGPYPINIKCYRLGNK-IGSVFPV

Q8JFY9 Poly(U)-specific endoribonuclease-A

3.4e-50

42.39

Show/hide

Query:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAEGCLFSWVSEDAFR-KPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI
        +LS+  N+LW+ D NR+  GKDY I   +GK        +   D A   LF +V E+  + + TF+ F SLLDNY  D G  E+VT EE  E   F++ I
Subjt:  DLSRACNKLWELDLNRLVPGKDYEIDCGEGKR------VSGREDMAEGCLFSWVSEDAFR-KPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEI

Query:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRG-GTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP
          T  +K  H YL           DFK  L ++WF LY R  G+   S  FEHVFVGE K RG QE+ G HNW+QFYL+E +  +DY+GY+  R+    P
Subjt:  SRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRG-GTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFP

Query:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGED---NHVELGPYPINIKCYRLGNKIGSVFPV
        D + Q+L +QF W  ++K V S+ IGVSPEFE ALYT+ F    E      V L  Y + I   R G  IG+ +PV
Subjt:  DSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGED---NHVELGPYPINIKCYRLGNKIGSVFPV

Arabidopsis top hits

e value

%identity

Alignment

AT4G17100.1 CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998); Has 943 Blast hits to 770 proteins in 162 species: Archae - 0; Bacteria - 61; Metazoa - 472; Fungi - 40; Plants - 78; Viruses - 35; Other Eukaryotes - 257 (source: NCBI BLink).

1.1e-165

66.44

Show/hide

Query:  MEGLIKGVLDIAL------GHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHN
        M+GLI+G++D+A+      G DD  D+E    SRDERSRSTWA VVSGEE+  +R  G +  RR + EE      +WE +G R+  +  Q     E    
Subjt:  MEGLIKGVLDIAL------GHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHN

Query:  RNHWATE--------EGSEEKNDGWETV-HKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEI
         N +A +        E  +E+NDGWETV  KKP R+ HKVQ + W  YKRP SEQ+YSDEVE    LEPS+ EL+ LS ACNKLWELDLNRLVPG+DY+I
Subjt:  RNHWATE--------EGSEEKNDGWETV-HKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEI

Query:  DCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTS
        DCG+GKRV  R DMAEG LFSWVSE+  RKPTF+RFCSLLDNYNP++G +E+VT EERQEQAAF+EEISRT+ IKYLH+YL    V P  Y +FKR+LTS
Subjt:  DCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTS

Query:  LWFDLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFEL
        LWFDLYGRGGTSGSSSAFEHVFVGEIKQ G ++VSGFHNWLQFYLEEAKG VDYQGYIFPRRRG+ PDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFEL
Subjt:  LWFDLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFEL

Query:  ALYTLCFFLGGEDNHVELGPYPINIKCYRLG-NKIGSVFPVAES
        ALYT+CFF+G EDNH++LGPY +N+KCYRLG N+IGS FP+AES
Subjt:  ALYTLCFFLGGEDNHVELGPYPINIKCYRLG-NKIGSVFPVAES

AT4G17100.2 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).

6.8e-155

63.37

Show/hide

Query:  MEGLIKGVLDIA-LGHDDNRDEES------APQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGH
        M+GLI+G++D   L  + N   E+      A +   +        VVSGEE+  +R  G +  RR + EE      +WE +G R+  +  Q     E   
Subjt:  MEGLIKGVLDIA-LGHDDNRDEES------APQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGH

Query:  NRNHWATE--------EGSEEKNDGWETV-HKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYE
          N +A +        E  +E+NDGWETV  KKP R+ HKVQ + W  YKRP SEQ+YSDEVE    LEPS+ EL+ LS ACNKLWELDLNRLVPG+DY+
Subjt:  NRNHWATE--------EGSEEKNDGWETV-HKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYE

Query:  IDCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLT
        IDCG+GKRV  R DMAEG LFSWVSE+  RKPTF+RFCSLLDNYNP++G +E+VT EERQEQAAF+EEISRT+ IKYLH+YL    V P  Y +FKR+LT
Subjt:  IDCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSRFCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLT

Query:  SLWFDLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFE
        SLWFDLYGRGGTSGSSSAFEHVFVGEIKQ G ++VSGFHNWLQFYLEEAKG VDYQGYIFPRRRG+ PDSETQLLTIQFEWNG+LKSVSSTL+GVSPEFE
Subjt:  SLWFDLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYLEEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFE

Query:  LALYTLCFFLGGEDNHVELGPYPINIKCYRLG-NKIGSVFPVAES
        LALYT+CFF+G EDNH++LGPY +N+KCYRLG N+IGS FP+AES
Subjt:  LALYTLCFFLGGEDNHVELGPYPINIKCYRLG-NKIGSVFPVAES

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGGTCTGATCAAGGGCGTTCTCGATATCGCGCTCGGCCACGACGACAATAGAGACGAAGAATCCGCTCCGCAGTCTCGAGACGAACGATCCAGATCCACTTGGGC
TCAGGTGGTGTCCGGGGAGGAGGATGCGGGAGATCGGAGACAAGGGTATGCTCCGAATCGGAGGGACGATGAGGAAGAGGGTCGTTCGCGGCGGCAGGAGTGGGAGGTTG
AGGGTTCGAGGATTTCTGGGCAACGGCAGCAGGGTGAATACCGTAGTGAGCATGGTCACAACAGAAACCATTGGGCTACAGAGGAGGGCTCTGAGGAGAAAAATGATGGG
TGGGAGACTGTCCACAAAAAGCCGCCTAGGAGAAAACACAAGGTGCAGATAGATAATTGGGGAGGATACAAACGACCTCCCAGTGAGCAAAATTACTCTGATGAGGTGGA
AGTTGGTGCTGAGCTAGAACCCTCAGAAGACGAGCTTGCCGATTTGTCCCGTGCCTGTAACAAGCTCTGGGAACTTGATCTAAATCGTTTGGTACCTGGAAAAGATTATG
AAATTGATTGTGGTGAAGGGAAGAGGGTCAGCGGAAGGGAAGATATGGCAGAAGGATGCCTCTTTAGTTGGGTTAGTGAAGATGCATTTAGGAAGCCAACATTTTCACGT
TTTTGTTCACTACTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAATTGTGACAGCTGAGGAGAGGCAAGAGCAGGCAGCATTCGTAGAAGAAATTAGCAGAACTGC
ACCAATTAAGTACCTTCACAAGTATCTTTCATCCAACGGAGTTACACCCAATGATTACCAAGATTTCAAACGTTTGCTGACCAGTCTGTGGTTCGATCTTTATGGTCGGG
GTGGAACATCTGGTTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGCAACGAGGTCAACAAGAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTT
GAAGAAGCCAAAGGGGCTGTTGACTATCAAGGTTACATTTTTCCCCGACGACGTGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGG
TATTCTCAAATCTGTCTCAAGCACTTTGATAGGAGTTAGCCCTGAGTTTGAACTTGCACTGTATACACTATGCTTCTTCCTCGGTGGAGAGGATAACCATGTCGAGCTCG
GACCCTATCCCATTAATATCAAGTGTTATCGACTTGGAAACAAAATCGGGTCCGTGTTTCCTGTAGCAGAGTCTTGA

mRNA sequence

Show/hide mRNA sequence

AATTATTAGTAAAGTCAACAAGCATTTTATAACAGCCACGCAGCTGTGTCGGCAGTCCAGAGAAGCACCAATCACAATCACACACGTGGCACTTTGCACTTAATTCCAAG
ATTGCCATTACCCGCCATCTTCAATATCTTCCGATTTCTTCAACCGCCCCTTCAATTTCTCCATCACTATCATCACACTCTCTTCACAGCTCTGCGTCTGAAAATGGAAG
GTCTGATCAAGGGCGTTCTCGATATCGCGCTCGGCCACGACGACAATAGAGACGAAGAATCCGCTCCGCAGTCTCGAGACGAACGATCCAGATCCACTTGGGCTCAGGTG
GTGTCCGGGGAGGAGGATGCGGGAGATCGGAGACAAGGGTATGCTCCGAATCGGAGGGACGATGAGGAAGAGGGTCGTTCGCGGCGGCAGGAGTGGGAGGTTGAGGGTTC
GAGGATTTCTGGGCAACGGCAGCAGGGTGAATACCGTAGTGAGCATGGTCACAACAGAAACCATTGGGCTACAGAGGAGGGCTCTGAGGAGAAAAATGATGGGTGGGAGA
CTGTCCACAAAAAGCCGCCTAGGAGAAAACACAAGGTGCAGATAGATAATTGGGGAGGATACAAACGACCTCCCAGTGAGCAAAATTACTCTGATGAGGTGGAAGTTGGT
GCTGAGCTAGAACCCTCAGAAGACGAGCTTGCCGATTTGTCCCGTGCCTGTAACAAGCTCTGGGAACTTGATCTAAATCGTTTGGTACCTGGAAAAGATTATGAAATTGA
TTGTGGTGAAGGGAAGAGGGTCAGCGGAAGGGAAGATATGGCAGAAGGATGCCTCTTTAGTTGGGTTAGTGAAGATGCATTTAGGAAGCCAACATTTTCACGTTTTTGTT
CACTACTTGATAACTACAACCCGGATCAAGGGAGCAGAGAAATTGTGACAGCTGAGGAGAGGCAAGAGCAGGCAGCATTCGTAGAAGAAATTAGCAGAACTGCACCAATT
AAGTACCTTCACAAGTATCTTTCATCCAACGGAGTTACACCCAATGATTACCAAGATTTCAAACGTTTGCTGACCAGTCTGTGGTTCGATCTTTATGGTCGGGGTGGAAC
ATCTGGTTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAGCAACGAGGTCAACAAGAGGTTTCTGGTTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAG
CCAAAGGGGCTGTTGACTATCAAGGTTACATTTTTCCCCGACGACGTGGCCAGTTTCCTGATTCAGAAACTCAATTGCTTACCATTCAGTTTGAATGGAATGGTATTCTC
AAATCTGTCTCAAGCACTTTGATAGGAGTTAGCCCTGAGTTTGAACTTGCACTGTATACACTATGCTTCTTCCTCGGTGGAGAGGATAACCATGTCGAGCTCGGACCCTA
TCCCATTAATATCAAGTGTTATCGACTTGGAAACAAAATCGGGTCCGTGTTTCCTGTAGCAGAGTCTTGAAGTTCCCTCACTGAGATTAATCCAGTTATTTCCCTTCAAG
CCCTTGGTATACTTGTAAGACAGGATTGTATTATAGATTTTGAGAACATTAGTGATTATTATGAGACAATAATATCTTTAGGACACAACAGTTCTATCTTCTATATGATG
GAATGGAAGAACATGATTTCATGATATACTCATTAGATTATAGGAGGATCCTGAAACTTTTGTATTATTACATTGGAATTGCAAAAGGATGTCTTTATATCTTCTTTGTC
TTCTCAATGGTTTGTAAAGATACTGATTCAGACAACTTATATTTGCTTTCATTTCTTCCCAAGGCTGAATGCATGTGAGACATTATGTAAATGTAGTTGCTTCTCACTCT
ACCTTGTGTATATTCATTTTATTCCTTTTTAGCATATTGCTACCATGTAATATAGTTTACAATCAATGCTTGGTTCTATAACATATAGGG

Protein sequence

Show/hide protein sequence

MEGLIKGVLDIALGHDDNRDEESAPQSRDERSRSTWAQVVSGEEDAGDRRQGYAPNRRDDEEEGRSRRQEWEVEGSRISGQRQQGEYRSEHGHNRNHWATEEGSEEKNDG
WETVHKKPPRRKHKVQIDNWGGYKRPPSEQNYSDEVEVGAELEPSEDELADLSRACNKLWELDLNRLVPGKDYEIDCGEGKRVSGREDMAEGCLFSWVSEDAFRKPTFSR
FCSLLDNYNPDQGSREIVTAEERQEQAAFVEEISRTAPIKYLHKYLSSNGVTPNDYQDFKRLLTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQRGQQEVSGFHNWLQFYL
EEAKGAVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGILKSVSSTLIGVSPEFELALYTLCFFLGGEDNHVELGPYPINIKCYRLGNKIGSVFPVAES

MC10g1277 (gene) of Bitter gourd (Dali-11) v1 genome