; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC10g1478 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC10g1478
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionArp2/3 complex 34 kDa subunit
Genome locationMC10:18072010..18076428
RNA-Seq ExpressionMC10g1478
SyntenyMC10g1478
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007188 - Actin-related protein 2/3 complex subunit 2
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134509.1 actin-related protein 2/3 complex subunit 2A [Cucumis sativus]2.68e-9493.42Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS S PQELKGAP+DALSANAGFVTFVIF RHVEGK+VDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKPDA  T +KTHSRSFKRLV DGNAG
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

XP_008439412.1 PREDICTED: actin-related protein 2/3 complex subunit 2A [Cucumis melo]7.66e-9492.76Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS S PQELKGAP+DALSANAGFVTFVIF RHVEGK+VDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKPDA  T +KTHSRSFKRLV DGN+G
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

XP_022155338.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Momordica charantia]7.03e-9794.74Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV VVFPMRF+DSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPS PQELKGAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKP+AT+T KKTHSRSFKRLVSDG+AG
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

XP_022158274.1 uncharacterized protein LOC111024802 isoform X1 [Momordica charantia]2.05e-101100Show/hide
Query:  AEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        AEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
Subjt:  AEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
Subjt:  KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

XP_038877486.1 actin-related protein 2/3 complex subunit 2A isoform X1 [Benincasa hispida]2.85e-9695.39Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS S PQELKGAPNDALSANAGFVTFVIF RHVEGKKVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKPDA +T KKTHSRSFKRLV+DGNAG
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

TrEMBL top hitse value%identityAlignment
A0A0A0KIL8 Arp2/3 complex 34 kDa subunit1.30e-9493.42Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS S PQELKGAP+DALSANAGFVTFVIF RHVEGK+VDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKPDA  T +KTHSRSFKRLV DGNAG
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

A0A1S3AYP0 Arp2/3 complex 34 kDa subunit3.71e-9492.76Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS S PQELKGAP+DALSANAGFVTFVIF RHVEGK+VDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKPDA  T +KTHSRSFKRLV DGN+G
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

A0A6J1DMP8 Arp2/3 complex 34 kDa subunit3.40e-9794.74Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV VVFPMRF+DSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPS PQELKGAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKP+AT+T KKTHSRSFKRLVSDG+AG
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

A0A6J1DYX6 Arp2/3 complex 34 kDa subunit9.92e-102100Show/hide
Query:  AEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        AEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
Subjt:  AEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
Subjt:  KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

A0A6J1HA86 Arp2/3 complex 34 kDa subunit3.71e-9491.45Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV VV+PMRFKDSIDIALATSFLQEFVEARR++GLN+APPCSWSPS PQELKGAPNDALSANAGFVTFVIFPRHVEGKK+DRVIWSLSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG
        VKCSEGFMHTRMRRRVESLIQALDRAKPD  +TGKK +SRSFKRL SDGNAG
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG

SwissProt top hitse value%identityAlignment
F4IVU1 Actin-related protein 2/3 complex subunit 2B3.0e-3349.19Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EK+T VFPM FKD+ D+ +ATSF QE VE      +  AP CSWSP  P +L+G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   YH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALD
        +KCS G++  RMR+R+E+L++ L+
Subjt:  VKCSEGFMHTRMRRRVESLIQALD

O96623 Actin-related protein 2/3 complex subunit 27.1e-2746.53Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQ-ELKGAPN-DALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVS
        Q + V V+F + FKD+ D+ L+  FLQ FV+ R+T  ++N P  ++S   P  ELKG     A  AN GFV+FV+FP H+  KK       + TF  Y+ 
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQ-ELKGAPN-DALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVS

Query:  YHVKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSF
        YH+KC++G+MHT MR RVESLIQ L+RAKP+  NT K+T +  F
Subjt:  YHVKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSF

P85970 Actin-related protein 2/3 complex subunit 22.4e-2241.01Show/hide
Query:  EKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        ++VTVVF   FKD  D+ +   F+QEF E RR +  + AP   +S    P ELK   + A+  N G++TFV+FPRH      D  I  + TF  Y+ YH+
Subjt:  EKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSR
        KCS+ ++HTRMR +    ++ L+RA+PDA     KT +R
Subjt:  KCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSR

Q8LGI3 Actin-related protein 2/3 complex subunit 2A1.6e-5875.86Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QA+KVTV FPMRFKDS+D  LATSFL+EFVEARR A LN AP CSWSP+ PQEL+GAP + LSANAGFVTFVIFPRHVEGKK+DR +W+LSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRL
        VK SEGFMHTRMRRRVES+IQALD+AKP      +  +++SFKRL
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRL

Q8WTM6 Probable actin-related protein 2/3 complex subunit 23.3e-2438.89Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        +A++VTV+F   FKD+ D+ +   FLQEF E R+ +    AP   +S    P ELK  P   +  N G++TFV+FPRH   K  D  I  + +F  Y+ Y
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFK
        H+KCS+ ++HTRMR +    ++ L+RA+P+     K  H R+F+
Subjt:  HVKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFK

Arabidopsis top hitse value%identityAlignment
AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc1.1e-5975.86Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QA+KVTV FPMRFKDS+D  LATSFL+EFVEARR A LN AP CSWSP+ PQEL+GAP + LSANAGFVTFVIFPRHVEGKK+DR +W+LSTFHAYVSYH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRL
        VK SEGFMHTRMRRRVES+IQALD+AKP      +  +++SFKRL
Subjt:  VKCSEGFMHTRMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRL

AT2G33385.1 actin-related protein C2B2.9e-3146.77Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EK+T VFPM FKD+ D+ +ATSF Q+         +  AP CSWSP  P +L+G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   YH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALD
        +KCS G++  RMR+R+E+L++ L+
Subjt:  VKCSEGFMHTRMRRRVESLIQALD

AT2G33385.2 actin-related protein C2B2.1e-3449.19Show/hide
Query:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EK+T VFPM FKD+ D+ +ATSF QE VE      +  AP CSWSP  P +L+G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   YH
Subjt:  QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKCSEGFMHTRMRRRVESLIQALD
        +KCS G++  RMR+R+E+L++ L+
Subjt:  VKCSEGFMHTRMRRRVESLIQALD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGCTGAAAAGGTAACTGTGGTATTTCCAATGAGATTTAAGGATTCTATAGACATTGCTCTTGCGACTTCTTTTCTCCAGGAATTTGTAGAAGCAAGACGAACTGCTGG
ACTTAATAATGCTCCTCCTTGTTCATGGTCTCCATCTACTCCTCAAGAACTGAAGGGAGCTCCCAATGATGCATTATCAGCCAATGCAGGATTTGTGACTTTTGTAATTT
TCCCTCGCCATGTAGAGGGAAAAAAGGTGGACCGTGTAATTTGGAGTTTGTCAACGTTTCATGCATATGTTAGTTATCATGTTAAGTGTTCAGAGGGTTTTATGCACACA
CGGATGCGACGACGTGTGGAGTCTCTGATTCAGGCACTTGATCGTGCCAAGCCAGATGCAACTAATACAGGGAAAAAAACACACAGCAGATCCTTCAAACGGCTGGTTAG
TGACGGGAATGCTGGC
mRNA sequenceShow/hide mRNA sequence
CAGGCTGAAAAGGTAACTGTGGTATTTCCAATGAGATTTAAGGATTCTATAGACATTGCTCTTGCGACTTCTTTTCTCCAGGAATTTGTAGAAGCAAGACGAACTGCTGG
ACTTAATAATGCTCCTCCTTGTTCATGGTCTCCATCTACTCCTCAAGAACTGAAGGGAGCTCCCAATGATGCATTATCAGCCAATGCAGGATTTGTGACTTTTGTAATTT
TCCCTCGCCATGTAGAGGGAAAAAAGGTGGACCGTGTAATTTGGAGTTTGTCAACGTTTCATGCATATGTTAGTTATCATGTTAAGTGTTCAGAGGGTTTTATGCACACA
CGGATGCGACGACGTGTGGAGTCTCTGATTCAGGCACTTGATCGTGCCAAGCCAGATGCAACTAATACAGGGAAAAAAACACACAGCAGATCCTTCAAACGGCTGGTTAG
TGACGGGAATGCTGGC
Protein sequenceShow/hide protein sequence
QAEKVTVVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSTPQELKGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVKCSEGFMHT
RMRRRVESLIQALDRAKPDATNTGKKTHSRSFKRLVSDGNAG