; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0095 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0095
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationMC11:712408..712578
RNA-Seq ExpressionMC11g0095
SyntenyMC11g0095
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024145.1 hypothetical protein SDJN02_12958, partial [Cucurbita argyrosperma subsp. argyrosperma]1.00e-2798.25Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
XP_022134007.1 uncharacterized protein LOC111006388 [Momordica charantia]2.11e-28100Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
XP_022937099.1 uncharacterized protein LOC111443504 [Cucurbita moschata]1.00e-2798.25Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
XP_023535633.1 uncharacterized protein LOC111797017 [Cucurbita pepo subsp. pepo]1.00e-2798.25Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
XP_038899939.1 uncharacterized protein LOC120087121 [Benincasa hispida]1.00e-2798.25Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
TrEMBL top hitse value%identityAlignment
A0A0A0LGI6 TFIIS N-terminal domain-containing protein1.68e-2796.49Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRT SSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
A0A5D3E6E1 TFIIS N-terminal domain-containing protein1.68e-2796.49Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRT SSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
A0A6J1BYC5 uncharacterized protein LOC1110063881.02e-28100Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
A0A6J1FA72 uncharacterized protein LOC1114435044.85e-2898.25Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
A0A6J1IDQ7 uncharacterized protein LOC1114755906.61e-2896.49Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
        LQFEG LGWRGSAATSAFRPASPRK+PDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G48050.1 BAH domain ;TFIIS helical bundle-like domain2.6e-0952.46Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSS----KQRQDFLDIDLNVAE
        L+ +G +GWRGSAATSAFRPA PRK  D   ++++   SD+S    KQ + FLD DLNV +
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSS----KQRQDFLDIDLNVAE
AT3G48050.2 BAH domain ;TFIIS helical bundle-like domain2.6e-0952.46Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSS----KQRQDFLDIDLNVAE
        L+ +G +GWRGSAATSAFRPA PRK  D   ++++   SD+S    KQ + FLD DLNV +
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSS----KQRQDFLDIDLNVAE
AT3G48060.1 BAH domain ;TFIIS helical bundle-like domain3.0e-1052.46Show/hide
Query:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSS----KQRQDFLDIDLNVAE
        L+++G +GWRGSAATSAFRPA PRK  D   ++++   SD+S    KQ + FLD DLNV +
Subjt:  LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSS----KQRQDFLDIDLNVAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGCAGTTTGAAGGGACCCTTGGATGGAGAGGCTCTGCAGCCACCAGTGCTTTCCGCCCTGCTTCCCCACGTAAAGTTCCTGATAGTGATAGGACTCTTTCTAGTGGTGG
AAATTCTGATAGTTCGAAGCAGAGGCAGGACTTTCTTGACATTGATCTGAATGTGGCTGAG
mRNA sequenceShow/hide mRNA sequence
TTGCAGTTTGAAGGGACCCTTGGATGGAGAGGCTCTGCAGCCACCAGTGCTTTCCGCCCTGCTTCCCCACGTAAAGTTCCTGATAGTGATAGGACTCTTTCTAGTGGTGG
AAATTCTGATAGTTCGAAGCAGAGGCAGGACTTTCTTGACATTGATCTGAATGTGGCTGAG
Protein sequenceShow/hide protein sequence
LQFEGTLGWRGSAATSAFRPASPRKVPDSDRTLSSGGNSDSSKQRQDFLDIDLNVAE