CuGenDBv2

Gene ID	MC11g0102
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transmembrane protein
Genome location	MC11:756201..756569
RNA-Seq Expression	MC11g0102
Synteny	MC11g0102
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0063287.1 hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]

8.08e-55

75.81

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ++  V DFKL L AL  L+IF  NS+AV GTV G A++RT +RS +EAE+TSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNRPYFRSKWSP
         AVLLFLLLILLWNRPYFRSKWSP
Subjt:  VAVLLFLLLILLWNRPYFRSKWSP

KAG6608597.1 hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sororia]

2.22e-43

72.17

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW   ER  EWKYGWAERTM SMSLPPMPLLAF GVV+LLLSLQ++ + FDFKLFL AL  LLIF+ NS+ V G+V   A +RT  RS +EAEKTSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNR
         AVLLFLLLILLWNR
Subjt:  VAVLLFLLLILLWNR

KAG7037914.1 hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.34e-43

71.3

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW   ER PEWKYGWAERT+ SMS PPMPLLAF GVV+LLLSLQ++ + FDFKLFL AL  LLIF+ NS+ V G+V   A +RT  RS +EAEKTSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNR
         AVLLFLLLILLWNR
Subjt:  VAVLLFLLLILLWNR

KGN60038.1 hypothetical protein Csa_001668 [Cucumis sativus]

3.44e-56

77.42

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW+V ERGPEWKYGW ER M+SMSLPPMPLLAF GVVVLLLSLQ++  V DFKL L AL  L+IFV NS+AV GTV G AS+RT +RS +EAE+TSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNRPYFRSKWSP
         AVLLFLLLILLWNRPYFRSKWSP
Subjt:  VAVLLFLLLILLWNRPYFRSKWSP

TYK31488.1 hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa]

3.29e-54

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ++  V DFKL L AL   +IF  NS+AV GTV G A++RT +RS +EAE+TSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNRPYFRSKWSP
         AVLLFLLLILLWNRPYFRSKWSP
Subjt:  VAVLLFLLLILLWNRPYFRSKWSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LE80 Uncharacterized protein

1.66e-56

77.42

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW+V ERGPEWKYGW ER M+SMSLPPMPLLAF GVVVLLLSLQ++  V DFKL L AL  L+IFV NS+AV GTV G AS+RT +RS +EAE+TSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNRPYFRSKWSP
         AVLLFLLLILLWNRPYFRSKWSP
Subjt:  VAVLLFLLLILLWNRPYFRSKWSP

A0A5A7V8G0 Uncharacterized protein

3.91e-55

75.81

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ++  V DFKL L AL  L+IF  NS+AV GTV G A++RT +RS +EAE+TSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNRPYFRSKWSP
         AVLLFLLLILLWNRPYFRSKWSP
Subjt:  VAVLLFLLLILLWNRPYFRSKWSP

A0A5D3E6P1 Uncharacterized protein

1.59e-54

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ++  V DFKL L AL   +IF  NS+AV GTV G A++RT +RS +EAE+TSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKT-VFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNRPYFRSKWSP
         AVLLFLLLILLWNRPYFRSKWSP
Subjt:  VAVLLFLLLILLWNRPYFRSKWSP

A0A6J1FL09 uncharacterized protein LOC111446211

2.51e-42

70.43

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Query:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG
        MSW   ER PEWKYGWAERT+ SMS PPMPLLAF GVV+LLLSLQ++ +  DFKLFL AL  LLIF+ NS+ V G+V   A +RT  RS +EAEKTSPWG
Subjt:  MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWG

Query:  VAVLLFLLLILLWNR
         AVLLFLLLILLWNR
Subjt:  VAVLLFLLLILLWNR

A0A6P9DT84 uncharacterized protein LOC118343814

2.63e-25

44.44

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Query:  MSWMVGER-GPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT---------KTVFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVR
        M W   ER GP WK+GW E+T+ S+S PP+PL+A  G++VLLL L +         +TV  FKLFLF L +LLIF+++S+  YG +V  A + T   +V 
Subjt:  MSWMVGER-GPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT---------KTVFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVR

Query:  EAEKTS--PWGVAVLLFLLLILLWNRPYFRSKWSP
        +AE     PWG+A+L+ +L+++L  +PYF S W P
Subjt:  EAEKTS--PWGVAVLLFLLLILLWNRPYFRSKWSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G42146.1 unknown protein

4.4e-14

36.3

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Query:  MSWMVGE-RGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT---------KTVFDFKLFLFALILLLIFVVNSMAVYGTVV--GPASVRTTTRS
        M W + E RG  WK GW E T+ + S PP+ LLA   ++ LLL L +         KT  + KLF+  L +L +FV+ S++    ++     SVR     
Subjt:  MSWMVGE-RGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT---------KTVFDFKLFLFALILLLIFVVNSMAVYGTVV--GPASVRTTTRS

Query:  VREAEKTSPWGVAVLLFLLLILLWNRPYFRSKWSP
            E   PWGV ++L LLL+L+  + YF S W P
Subjt:  VREAEKTSPWGVAVLLFLLLILLWNRPYFRSKWSP

Sequences

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CDS sequence

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ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCATGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGT
CGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTTTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATG
GTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGACCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTG
CTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCC

mRNA sequence

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Protein sequence

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MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTVFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLIL
LWNRPYFRSKWSP

MC11g0102 (gene) of Bitter gourd (Dali-11) v1 genome