CuGenDBv2

Gene ID	MC11g0123
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Genome location	MC11:881176..883756
RNA-Seq Expression	MC11g0123
Synteny	MC11g0123
Gene Ontology terms	GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
InterPro domains	IPR019716 - Ribosomal protein L53, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591283.1 hypothetical protein SDJN03_13629, partial [Cucurbita argyrosperma subsp. sororia]

1.14e-78

94.49

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTP QTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL QP PSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

XP_022139291.1 uncharacterized protein LOC111010210 [Momordica charantia]

3.81e-84

100

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWPIVIPEEELRQPTPSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

XP_022974805.1 uncharacterized protein LOC111473560 isoform X1 [Cucurbita maxima]

1.01e-79

93.7

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL QP PSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

XP_022982466.1 uncharacterized protein LOC111481279 [Cucurbita maxima]

2.38e-78

92.91

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIR  ILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL  P PSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

XP_038896893.1 uncharacterized protein LOC120085105 [Benincasa hispida]

2.04e-79

93.7

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL+QP   IKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGG5 Uncharacterized protein

2.24e-76

90.55

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLA CMEFLAQCNA KAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIR+MILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
         WP++IP+EEL+QP   IKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

A0A6J1CC86 uncharacterized protein LOC111010210

1.84e-84

100

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWPIVIPEEELRQPTPSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

A0A6J1FNY6 uncharacterized protein LOC111445972

1.64e-78

92.13

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIR MILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL  P PSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

A0A6J1IEW0 uncharacterized protein LOC111473560 isoform X1

4.89e-80

93.7

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL QP PSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

A0A6J1IZE5 uncharacterized protein LOC111481279

1.15e-78

92.91

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIR  ILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
        TWP++IP+EEL  P PSIKPRKAEDKQ
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G39600.1 CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

1.5e-54

79.53

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFN LDPRLASC+EFLAQCNARKAKESNP CQ++VKRRTD+QPPQI VTFVNGVEE FDA +T AQ+IR MIL+KGQ LETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPIVIPEEELRQPTPSIKPRKAEDKQ
         WP++IP+EEL Q  P +KPRKAEDK+
Subjt:  TWPIVIPEEELRQPTPSIKPRKAEDKQ

Sequences

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CDS sequence

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ATGTTGAAGTTCCTGTCTAAAGTGAAGATCGAATTCAATGCCCTGGATCCACGCTTAGCTTCTTGTATGGAATTTTTGGCGCAGTGTAATGCTCGCAAGGCCAAGGAATC
GAACCCCGCTTGTCAGTTGATCGTCAAGCGCCGAACCGACGACCAGCCGCCCCAGATCGCCGTCACCTTCGTCAACGGAGTTGAGGAGGTTTTCGACGCTACCTCCACTC
CTGCTCAAACTATTAGGAATATGATTCTTGAGAAGGGCCAACTCCTTGAGACCGAGCAAATGTTCCGAGAGGCTGGCGAAACTTGGCCGATCGTCATCCCCGAGGAGGAG
CTTCGTCAACCTACTCCCAGCATCAAGCCTAGAAAAGCAGAAGACAAGCAGTAA

mRNA sequence

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CTCTGATTTACAAAGATAGTTGTGTATACTATCTTTTTTTAATAAAAATTATTGTTTTTTTACAGGAAGAAACTTTGTTATAAAAGAAAACTCTAGTAATAAATAACTTA
TTTAATTTCACAAATCTGGGCTTTGGTAATATTTATAAAAATTGAAATTTCATAAAAGCACAGATTGAATTTCCCATAGGTAAAGGCCCATTTCGTCAAAAACCCAATTT
CGAAACTTCCAACTTTTAGGAATTTAGGCTGTTGGCTGAGGCTCCAATCATCTCTGTGCGAAGGTTCTTGTTCTTGGCAAGCAGCAATGTTGAAGTTCCTGTCTAAAGTG
AAGATCGAATTCAATGCCCTGGATCCACGCTTAGCTTCTTGTATGGAATTTTTGGCGCAGTGTAATGCTCGCAAGGCCAAGGAATCGAACCCCGCTTGTCAGTTGATCGT
CAAGCGCCGAACCGACGACCAGCCGCCCCAGATCGCCGTCACCTTCGTCAACGGAGTTGAGGAGGTTTTCGACGCTACCTCCACTCCTGCTCAAACTATTAGGAATATGA
TTCTTGAGAAGGGCCAACTCCTTGAGACCGAGCAAATGTTCCGAGAGGCTGGCGAAACTTGGCCGATCGTCATCCCCGAGGAGGAGCTTCGTCAACCTACTCCCAGCATC
AAGCCTAGAAAAGCAGAAGACAAGCAGTAACTTCGTTGCAATTGACCAATTTCATAGCAAATCTTGATTTTTGTCTTCCTTGCGATGGACCCGAAAGAAGAGAGGACAAC
ATGCAACCGTAGAATGTAAAAAATGGAATTGGTTTCCATGCAATAAAAATCTGATTCTAGGATGTTTTCATTCTACATTTCATACAGATGCTGCTTGTCTTCTTAAATGT
GAAAGAATTCCACATCAAGTTCCAAATGTAGCCTGTGGATGGTGTTGGTTTTTATGAACCATTTACTGATCATACTAAGTGGGAG

Protein sequence

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MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPIVIPEEE
LRQPTPSIKPRKAEDKQ

MC11g0123 (gene) of Bitter gourd (Dali-11) v1 genome