; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0131 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0131
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationMC11:923041..923556
RNA-Seq ExpressionMC11g0131
SyntenyMC11g0131
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]1.83e-5963.74Show/hide
Query:  VVFAALIYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG-----------------W
        V F   +YGS A+GLKNGT      FLTFSE      G   +SS  TTTVEVSKQN   RGGGGGYGWGWG GGGGGGGGGG                 W
Subjt:  VVFAALIYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG-----------------W

Query:  WKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
        WKWGCGGQPKSGR GGGRR+       +V RKR+Y+E DY  GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
Subjt:  WKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]1.02e-5861.5Show/hide
Query:  VVFAALIYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG------------------
        + F   +YGS A+GLKNGT      FLTFSE      G   +SS  TTTVEVSKQN   RGGGGGYGWGWG GGGGGGGGGG                  
Subjt:  VVFAALIYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG------------------

Query:  ----WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
            WWKWGCGGQPKSGR GGGRR+       +V RKR+Y+E DY  GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
Subjt:  ----WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]1.01e-5761.42Show/hide
Query:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----
        M  +N +K  AL V+ A +IYGS A +GL NG+M  NVTFLTFSE      G   +SS+ T+TVEVSKQNG G GGGGGYGWGWG GGGGGGGGGG    
Subjt:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----

Query:  ---------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
                       WWKWGCGG+PK  +   GRR  +GR +N V RK+MY+E DY+ GEF QC+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
Subjt:  ---------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]1.46e-5662.37Show/hide
Query:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----
        M  +N +K  AL V+ A +I GS A +GL NG+M  NVTFLTFSE      G   +SS+ +TTVEVSKQNG G  GGGGYGWGWG GGGGGGGGGG    
Subjt:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----

Query:  ------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
                    WWKWGCGGQPKS R   GRR  +G ++N V  KRMY E DY+ GEF QC+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
Subjt:  ------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]6.23e-5864.57Show/hide
Query:  IYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----------------WWKWGCGG
        +YGS A+GLKNGT      FLTFSE      G   +SS  TTTVEVSKQN   RGGGGGYGWGWG GGGGGGGGGG                WWKWGCGG
Subjt:  IYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----------------WWKWGCGG

Query:  QPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
        QPKSGR GGGRR+       +V RKR+Y+E DY  GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCR+MCKAHCR
Subjt:  QPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein7.05e-5762.37Show/hide
Query:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----
        M  +N +K  AL V+ A +I GS A +GL NG+M  NVTFLTFSE      G   +SS+ +TTVEVSKQNG G  GGGGYGWGWG GGGGGGGGGG    
Subjt:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----

Query:  ------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
                    WWKWGCGGQPKS R   GRR  +G ++N V  KRMY E DY+ GEF QC+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
Subjt:  ------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC

A0A1S3C029 keratin, type II cytoskeletal 14.89e-5861.42Show/hide
Query:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----
        M  +N +K  AL V+ A +IYGS A +GL NG+M  NVTFLTFSE      G   +SS+ T+TVEVSKQNG G GGGGGYGWGWG GGGGGGGGGG    
Subjt:  MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----

Query:  ---------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
                       WWKWGCGG+PK  +   GRR  +GR +N V RK+MY+E DY+ GEF QC+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAHC
Subjt:  ---------------WWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC

A0A5D2KXD0 Uncharacterized protein5.78e-3973.68Show/hide
Query:  GSGRGGGGGYGWGWGWGGGG---GGGGGGWWKWGCGGQPKSGRGGG-GRRRGS-GRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGP
        G G GGGGGYGWGWG GGGG   GGGGGGW+KWGCGG+ K+G+G G GR +GS GRNQ H  RKR++++ DYK GEF QC VRGRCRGMRLDCPLHCGGP
Subjt:  GSGRGGGGGYGWGWGWGGGG---GGGGGGWWKWGCGGQPKSGRGGG-GRRRGS-GRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGP

Query:  CFYDCRYMCKAHCR
        C YDC++MCKAHCR
Subjt:  CFYDCRYMCKAHCR

A0A5J5RFA8 Uncharacterized protein8.41e-3973.04Show/hide
Query:  GSGRGGGGGYGWGWGWGGGGG----GGGGGWWKWGCGGQPKSGRGGG-GRRRGS-GRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGG
        G G GGGGGYGWGWG GGGGG    GGGGGW+KWGCGG+ K+G+G G GR +GS GRNQ H  RKR++++ DYK GEF QC VRGRCRGMRLDCPLHCGG
Subjt:  GSGRGGGGGYGWGWGWGGGGG----GGGGGWWKWGCGGQPKSGRGGG-GRRRGS-GRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGG

Query:  PCFYDCRYMCKAHCR
        PC YDC++MCKAHCR
Subjt:  PCFYDCRYMCKAHCR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like3.01e-5864.57Show/hide
Query:  IYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----------------WWKWGCGG
        +YGS A+GLKNGT      FLTFSE      G   +SS  TTTVEVSKQN   RGGGGGYGWGWG GGGGGGGGGG                WWKWGCGG
Subjt:  IYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----------------WWKWGCGG

Query:  QPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
        QPKSGR GGGRR+       +V RKR+Y+E DY  GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCR+MCKAHCR
Subjt:  QPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein8.6e-1642.22Show/hide
Query:  MKFCALAVVFAALIYGSMADGLKNGTMRTNVTFLTFSEGRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGW----------GWGGGGGGGGGGWWKWGCG
        MK  +  VV   LI     + L +G  R+N       +  N   ++TTT V V  +  S  GG G Y WGW          G GGGGGGGGGG W WG G
Subjt:  MKFCALAVVFAALIYGSMADGLKNGTMRTNVTFLTFSEGRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGW----------GWGGGGGGGGGGWWKWGCG

Query:  GQP----KSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
        G      K G GGGG  +G GR     F KR          E+ +C  RG+C G RL+CP HCGG CFYDC ++CK HCR
Subjt:  GQP----KSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCCAAAATCTAATGAAATTCTGCGCTCTGGCGGTGGTTTTTGCGGCACTGATTTATGGGTCAATGGCGGATGGTTTGAAAAATGGCACAATGCGTACTAATGT
CACTTTTCTGACGTTCTCGGAGGGAAGAAATGAGAGCTCTAGCAATACTACTACTACGGTTGAGGTGAGCAAGCAGAACGGCTCCGGCAGAGGAGGCGGCGGTGGCTATG
GGTGGGGGTGGGGGTGGGGCGGCGGAGGAGGCGGCGGCGGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCGAAATCGGGACGCGGCGGCGGAGGGAGAAGAAGA
GGGTCCGGGAGGAATCAAAATCATGTATTCAGGAAGAGAATGTACGATGAGGGAGATTATAAAACAGGGGAATTTGGTCAATGCGTGGTGAGAGGAAGATGCAGAGGAAT
GAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTCTACGACTGCCGGTACATGTGCAAGGCCCACTGCCGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCCAAAATCTAATGAAATTCTGCGCTCTGGCGGTGGTTTTTGCGGCACTGATTTATGGGTCAATGGCGGATGGTTTGAAAAATGGCACAATGCGTACTAATGT
CACTTTTCTGACGTTCTCGGAGGGAAGAAATGAGAGCTCTAGCAATACTACTACTACGGTTGAGGTGAGCAAGCAGAACGGCTCCGGCAGAGGAGGCGGCGGTGGCTATG
GGTGGGGGTGGGGGTGGGGCGGCGGAGGAGGCGGCGGCGGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCGAAATCGGGACGCGGCGGCGGAGGGAGAAGAAGA
GGGTCCGGGAGGAATCAAAATCATGTATTCAGGAAGAGAATGTACGATGAGGGAGATTATAAAACAGGGGAATTTGGTCAATGCGTGGTGAGAGGAAGATGCAGAGGAAT
GAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTCTACGACTGCCGGTACATGTGCAAGGCCCACTGCCGA
Protein sequenceShow/hide protein sequence
MACQNLMKFCALAVVFAALIYGSMADGLKNGTMRTNVTFLTFSEGRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGGWWKWGCGGQPKSGRGGGGRRR
GSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR