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MC11g0161 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0161
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein RADIALIS-like 4
Genome locationMC11:1189939..1190199
RNA-Seq ExpressionMC11g0161
SyntenyMC11g0161
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60114.2 hypothetical protein Csa_000871 [Cucumis sativus]8.86e-4889.66Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTS  GFYSSWTK+ENKKFEEALAF+D+DTPDRFEKVARAVGGGKTAEEARRLYELL RDV+KIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

XP_008466554.1 PREDICTED: protein RADIALIS-like 4 [Cucumis melo]4.22e-4889.66Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTS  GFYSSWTK+ENKKFEEALAF+D+DTPDRFEKVARAVGGGKTAEEARRLYELL RDV+KIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

XP_022155868.1 protein RADIALIS-like 4 [Momordica charantia]9.36e-55100Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

XP_022936283.1 protein RADIALIS-like 3 [Cucurbita moschata]2.71e-4893.18Show/hide
Query:  MASSSVTSA-RGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTSA RGFYSSWTK+ENKKFEEALA+YDQDTPDRFEKVARAVGGGKTAEEARRLYELL RDVKKIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSA-RGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

XP_022940511.1 protein RADIALIS-like 3 [Cucurbita moschata]2.38e-4790.7Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNG
        MASSS T+A GFYSSWTKRENKKFEEALAFYDQDTPDRFE VARAVGGGKTAEE RRLYELL RDV KIEAGQVQIPLYKN GYNG
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNG

TrEMBL top hitse value%identityAlignment
A0A0A0LGL4 Uncharacterized protein2.04e-4889.66Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTS  GFYSSWTK+ENKKFEEALAF+D+DTPDRFEKVARAVGGGKTAEEARRLYELL RDV+KIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

A0A1S3CRN8 protein RADIALIS-like 42.04e-4889.66Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTS  GFYSSWTK+ENKKFEEALAF+D+DTPDRFEKVARAVGGGKTAEEARRLYELL RDV+KIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

A0A5A7TE80 Protein RADIALIS-like 32.04e-4889.66Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTS  GFYSSWTK+ENKKFEEALAF+D+DTPDRFEKVARAVGGGKTAEEARRLYELL RDV+KIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

A0A6J1DP29 protein RADIALIS-like 44.53e-55100Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

A0A6J1FCU5 protein RADIALIS-like 31.31e-4893.18Show/hide
Query:  MASSSVTSA-RGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        MASSSVTSA RGFYSSWTK+ENKKFEEALA+YDQDTPDRFEKVARAVGGGKTAEEARRLYELL RDVKKIEAGQVQIPLYKN G NGR
Subjt:  MASSSVTSA-RGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 14.2e-1653.93Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTG--YNGR
        MASSS++S      SWT ++NK FE+ALA YDQDTP+R++ VA+ V GGKT EE +R YELL +D+  IE G V  P Y+ +G   NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTG--YNGR

Q1G3C4 Protein RADIALIS-like 41.5e-1658.54Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNT
        MASSS+++     SSWT RE+K+FE ALA +D+DTPDR++K+ARAV GGK+ EE +R YELL RDV  IE+G+   P Y+NT
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNT

Q58FS3 Transcription factor RADIALIS4.7e-1552.5Show/hide
Query:  VTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN
        + S RG    W+ +ENK FE ALA YD+DTPDR+  VARAV  G+T EE ++ YE+L  D+K IE+G+V  P Y+ TG N
Subjt:  VTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN

Q6NNN0 Protein RADIALIS-like 35.9e-1860Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN
        MAS+S++S+    +SWT++ENK FE ALA YDQDTPDR+  VARAV GGK+AEE RR YELL RDV  IE+G+   P Y++ G N
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN

Q9SIJ5 Protein RADIALIS-like 26.5e-1758.82Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN
        MAS S++S      SWT ++NK FE ALA YDQDTPDR+  VARAV GGKT EEA+R Y+LL RD++ IE G V  P YK T  N
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 52.8e-1553.75Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYK
        MASSS++S+    SSWT ++NK FE ALA YD+DTPDR++ VA+AV G K+AEE +R Y++L  D+  IE   V +P YK
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYK

AT1G75250.1 RAD-like 62.8e-1550.62Show/hide
Query:  TSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR
        +++R   S WT  +NK FE ALA YD+DTPDR+  VA+AV GGKT EE +R Y++L  D+  IE G+V +P YK    N R
Subjt:  TSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR

AT2G18328.1 RAD-like 41.0e-1758.54Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNT
        MASSS+++     SSWT RE+K+FE ALA +D+DTPDR++K+ARAV GGK+ EE +R YELL RDV  IE+G+   P Y+NT
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNT

AT2G21650.1 Homeodomain-like superfamily protein4.6e-1858.82Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN
        MAS S++S      SWT ++NK FE ALA YDQDTPDR+  VARAV GGKT EEA+R Y+LL RD++ IE G V  P YK T  N
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYN

AT4G39250.1 RAD-like 13.0e-1753.93Show/hide
Query:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTG--YNGR
        MASSS++S      SWT ++NK FE+ALA YDQDTP+R++ VA+ V GGKT EE +R YELL +D+  IE G V  P Y+ +G   NGR
Subjt:  MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTG--YNGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAAGCTCCGTCACGTCAGCACGTGGCTTTTACTCGTCCTGGACAAAAAGAGAGAACAAGAAATTTGAGGAGGCATTGGCCTTCTATGACCAGGACACACCAGA
CCGGTTCGAGAAAGTAGCGAGGGCGGTTGGTGGGGGGAAGACAGCTGAGGAAGCAAGAAGGCTGTATGAGTTGCTAGAGCGAGATGTCAAAAAAATTGAAGCTGGTCAAG
TCCAAATACCCCTGTATAAGAATACTGGATATAACGGCAGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAAGCTCCGTCACGTCAGCACGTGGCTTTTACTCGTCCTGGACAAAAAGAGAGAACAAGAAATTTGAGGAGGCATTGGCCTTCTATGACCAGGACACACCAGA
CCGGTTCGAGAAAGTAGCGAGGGCGGTTGGTGGGGGGAAGACAGCTGAGGAAGCAAGAAGGCTGTATGAGTTGCTAGAGCGAGATGTCAAAAAAATTGAAGCTGGTCAAG
TCCAAATACCCCTGTATAAGAATACTGGATATAACGGCAGA
Protein sequenceShow/hide protein sequence
MASSSVTSARGFYSSWTKRENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLERDVKKIEAGQVQIPLYKNTGYNGR