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MC11g0165 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0165
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein RADIALIS-like 3
Genome locationMC11:1209704..1209967
RNA-Seq ExpressionMC11g0165
SyntenyMC11g0165
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147867.1 protein RADIALIS-like 3 [Cucumis sativus]3.09e-4884.09Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSG SNWTAKQNKVFENALA+YDKDTP+RW NLARAVGGKTAEEVKRHYERLV+DVNKIETGQVPFPNYR+S    RGF F+D+E+R
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

XP_008465612.1 PREDICTED: protein RADIALIS-like 3 [Cucumis melo]3.16e-5186.36Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSG SNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKIETGQVPFPNYR+S    RGFCF+D+E+R
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

XP_022138113.1 protein RADIALIS-like 3 [Momordica charantia]7.56e-61100Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

XP_022941099.1 protein RADIALIS-like 3 [Cucurbita moschata]1.93e-4277.38Show/hide
Query:  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        GS WTAKQNK+FENALA+YD+DTP+RW+NLARAVGGKTAEEVKRHYE LV+DVNKIE+GQVPFP Y KS     GF F+DEE+R
Subjt:  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

XP_038905673.1 protein RADIALIS-like 3 [Benincasa hispida]7.89e-5186.36Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSG S+WTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKIETGQVPFPNYR+S    RGFCF+DEE+R
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

TrEMBL top hitse value%identityAlignment
A0A0A0LGK8 SANT domain-containing protein1.50e-4884.09Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSG SNWTAKQNKVFENALA+YDKDTP+RW NLARAVGGKTAEEVKRHYERLV+DVNKIETGQVPFPNYR+S    RGF F+D+E+R
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

A0A1S3CPA0 protein RADIALIS-like 31.53e-5186.36Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSG SNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKIETGQVPFPNYR+S    RGFCF+D+E+R
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

A0A5D3D7Z0 Protein RADIALIS-like 31.53e-5186.36Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSG SNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYERLV+DVNKIETGQVPFPNYR+S    RGFCF+D+E+R
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

A0A6J1CC55 protein RADIALIS-like 33.66e-61100Show/hide
Query:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
Subjt:  MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

A0A6J1FM85 protein RADIALIS-like 39.37e-4377.38Show/hide
Query:  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        GS WTAKQNK+FENALA+YD+DTP+RW+NLARAVGGKTAEEVKRHYE LV+DVNKIE+GQVPFP Y KS     GF F+DEE+R
Subjt:  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 15.0e-2566.28Show/hide
Query:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        S GS WTAKQNK FE ALA YD+DTP+RW N+A+ VGGKT EEVKRHYE LV D+N IE G VPFPNYR S     G     EEKR
Subjt:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

Q1A173 Protein RADIALIS-like 68.6e-2563.41Show/hide
Query:  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEK
        S WT  QNK+FE ALAVYDKDTPDRWHN+A+AVGGKT EEVKRHY+ LV+D+  IETG+VP PNY+      R     D  K
Subjt:  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEK

Q58FS3 Transcription factor RADIALIS3.6e-2371.64Show/hide
Query:  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYR
        G  W+AK+NK FE ALAVYDKDTPDRW N+ARAV G+T EEVK+HYE LV+D+  IE+G+VPFPNYR
Subjt:  GSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYR

Q6NNN0 Protein RADIALIS-like 31.9e-2465.75Show/hide
Query:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAH
        S  ++WT K+NK+FE ALA YD+DTPDRWHN+ARAVGGK+AEEV+RHYE L+ DVN IE+G+ P PNYR + +
Subjt:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAH

Q9SIJ5 Protein RADIALIS-like 26.6e-2561.18Show/hide
Query:  GGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        G  +WT KQNK FE ALAVYD+DTPDRWHN+ARAVGGKT EE KR Y+ LV D+  IE G VPFP+Y+ +          DEEKR
Subjt:  GGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 51.1e-2266.67Show/hide
Query:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYR
        S  S+WT+KQNK+FE ALAVYDKDTPDRW N+A+AVG K+AEEVKRHY+ LV+D+  IE   VP P Y+
Subjt:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYR

AT1G75250.1 RAD-like 64.0e-2574.24Show/hide
Query:  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYR
        S WT  QNK+FE ALAVYDKDTPDRWHN+A+AVGGKT EEVKRHY+ LV+D+  IETG+VP PNY+
Subjt:  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYR

AT1G75250.2 RAD-like 66.1e-2663.41Show/hide
Query:  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEK
        S WT  QNK+FE ALAVYDKDTPDRWHN+A+AVGGKT EEVKRHY+ LV+D+  IETG+VP PNY+      R     D  K
Subjt:  SNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEK

AT2G21650.1 Homeodomain-like superfamily protein4.7e-2661.18Show/hide
Query:  GGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        G  +WT KQNK FE ALAVYD+DTPDRWHN+ARAVGGKT EE KR Y+ LV D+  IE G VPFP+Y+ +          DEEKR
Subjt:  GGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR

AT4G39250.1 RAD-like 13.6e-2666.28Show/hide
Query:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR
        S GS WTAKQNK FE ALA YD+DTP+RW N+A+ VGGKT EEVKRHYE LV D+N IE G VPFPNYR S     G     EEKR
Subjt:  SGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCGGCGGGTCGAACTGGACGGCGAAGCAGAACAAAGTTTTCGAGAATGCTTTAGCGGTCTACGACAAGGACACGCCGGACCGGTGGCATAACCTCGCCAGAGC
GGTCGGCGGAAAGACGGCGGAGGAAGTGAAGCGCCACTACGAACGGCTCGTCGATGACGTCAACAAGATCGAGACCGGCCAAGTTCCGTTCCCCAATTACAGAAAATCCG
CCCACGGACCCAGAGGATTCTGCTTTATCGACGAAGAAAAACGG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCGGCGGGTCGAACTGGACGGCGAAGCAGAACAAAGTTTTCGAGAATGCTTTAGCGGTCTACGACAAGGACACGCCGGACCGGTGGCATAACCTCGCCAGAGC
GGTCGGCGGAAAGACGGCGGAGGAAGTGAAGCGCCACTACGAACGGCTCGTCGATGACGTCAACAAGATCGAGACCGGCCAAGTTCCGTTCCCCAATTACAGAAAATCCG
CCCACGGACCCAGAGGATTCTGCTTTATCGACGAAGAAAAACGG
Protein sequenceShow/hide protein sequence
MGSGGSNWTAKQNKVFENALAVYDKDTPDRWHNLARAVGGKTAEEVKRHYERLVDDVNKIETGQVPFPNYRKSAHGPRGFCFIDEEKR