; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0230 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0230
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein DCL homolog, chloroplastic
Genome locationMC11:1812110..1814891
RNA-Seq ExpressionMC11g0230
SyntenyMC11g0230
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]5.69e-13785.71Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE D
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]1.95e-13683.48Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+ KPPPFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEG R+RSH+EYSSDLLRKPV P AKD A  SEDD+ SEESG + EEE +
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]5.84e-13885.71Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE D
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]3.10e-165100Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYRG
        RKNYPLHAESFILRHFRRRRRNYRG
Subjt:  RKNYPLHAESFILRHFRRRRRNYRG

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]6.17e-14589.73Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+ KPPPF P HSLNP+F NSSPVILCFP  PMTS H S RALKTGPEGSRIRSHEEYSSDLLRKPVVPPA+D AR+SEDD+ SEESG D EEEED
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRL+ EHEKTILDRLLPYHPE EKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RK YPLHAESFILRHFRRRRRN+R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein9.43e-13783.48Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+ KPPPFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEG R+RSH+EYSSDLLRKPV P AKD A  SEDD+ SEESG + EEE +
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

A0A1S3BVA4 protein DCL, chloroplastic2.83e-13885.71Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE D
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

A0A5A7VDC9 Protein DCL2.75e-13785.71Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE D
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLHAESFILRHFRRRRRNYR

A0A6J1BTU2 protein DCL homolog, chloroplastic1.50e-165100Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNYRG
        RKNYPLHAESFILRHFRRRRRNYRG
Subjt:  RKNYPLHAESFILRHFRRRRRNYRG

A0A6J1IM57 protein DCL homolog, chloroplastic-like2.38e-13584.3Show/hide
Query:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED
        +AMAS+ KPPP  P HSLNP+ LN+SPVI+CF  HPMTS HPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPA D A  SED   SEESG   EEEE+
Subjt:  MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWED+ILE+TVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLL YHPECEKKIGCGIDYITIGYHP+FE SRCLFIVRKDGELVDFSYWKC++GLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRRNY
        RKNYPLHAESFILRHF+RRRR++
Subjt:  RKNYPLHAESFILRHFRRRRRNY

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)8.8e-0481.82Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMV
        WVDWED+IL+DTVPLV FVRM+
Subjt:  WVDWEDKILEDTVPLVGFVRMV

Q42463 Protein DCL, chloroplastic5.1e-6869.44Show/hide
Query:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISED---DEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTI
        A+KTG EG  IRS    +++LLRKPV+    +    SE+   +E  +E G    + E WVDWED+ILEDTVPLVGFVRM+LHSGKY  GDRLS +H++TI
Subjt:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISED---DEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTI

Query:  LDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN
        L RLLPYHPEC+KKIG G+DYIT+GYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPL+A+SFILRHFR+RRRN
Subjt:  LDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRN

Q5D869 DNA-directed RNA polymerase V subunit 17.9e-2137.93Show/hide
Query:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLHAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFRRRR

Q8L557 Protein EMBRYO DEFECTIVE 5148.0e-0532.77Show/hide
Query:  EDDEGSEESGTDGEEEEDW-VDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIV
        E++ G  +    GEEE+   V    K    +V +  +    LH       D    EH   +LD +   H E EKKIG GI    +  HP ++ SRC F+V
Subjt:  EDDEGSEESGTDGEEEEDW-VDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIV

Query:  RKDGELVDFSYWKCIKGLI
        R+D    DFS+ KC+  ++
Subjt:  RKDGELVDFSYWKCIKGLI

Q9C642 Protein DCL homolog, chloroplastic2.0e-7261.33Show/hide
Query:  MAMASV--SKPPPFPPFHSLNPSF-LNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEE
        M++AS+  S P   P F      F  +SSP+ L FP    TSL P +RAL+T  +G++I + E Y S+LLR+P +   +     SE++E  EE  ++G+E
Subjt:  MAMASV--SKPPPFPPFHSLNPSF-LNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEE

Query:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
           +VDWEDKILE TVPLVGFVRM+LHSGKY + DRLS EHE+TI++ LLPYHPECEKKIGCGIDYI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLHAESFILRHFRRRRRN
        GLI+K YPL+A+SFILRHFR+RR+N
Subjt:  GLIRKNYPLHAESFILRHFRRRRRN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)1.4e-7361.33Show/hide
Query:  MAMASV--SKPPPFPPFHSLNPSF-LNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEE
        M++AS+  S P   P F      F  +SSP+ L FP    TSL P +RAL+T  +G++I + E Y S+LLR+P +   +     SE++E  EE  ++G+E
Subjt:  MAMASV--SKPPPFPPFHSLNPSF-LNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEE

Query:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
           +VDWEDKILE TVPLVGFVRM+LHSGKY + DRLS EHE+TI++ LLPYHPECEKKIGCGIDYI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLHAESFILRHFRRRRRN
        GLI+K YPL+A+SFILRHFR+RR+N
Subjt:  GLIRKNYPLHAESFILRHFRRRRRN

AT1G45230.2 Protein of unknown function (DUF3223)1.2e-7260.89Show/hide
Query:  MAMASV--SKPPPFPPFHSLNPSF-LNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEE
        M++AS+  S P   P F      F  +SSP+ L FP    TSL P +RAL+T  +G++I + E Y S+LLR+P +   +     SE++E  EE  ++G+E
Subjt:  MAMASV--SKPPPFPPFHSLNPSF-LNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEE

Query:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
           +VDWEDKILE TVPLVGFVRM+LHSGKY + DRLS EHE+TI++ LLPYHPECEKKIGCGIDYI + +HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLHAESFILRHFRRRRRN
        GLI+K YPL+A+SFILRHFR+RR+N
Subjt:  GLIRKNYPLHAESFILRHFRRRRRN

AT2G40030.1 nuclear RNA polymerase D1B5.6e-2237.93Show/hide
Query:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLHAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFRRRR

AT3G46630.1 Protein of unknown function (DUF3223)4.2e-3349.15Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        W + E +IL D  P+    + +LHS +Y  G+RL  E EK ++++LLPYHP  + KIGCG+D+I +  HP F  SRCLF+VR DG  +DFSY KC++  +
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRR
        R  YP HAE FI  HF+R
Subjt:  RKNYPLHAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)5.7e-0632.77Show/hide
Query:  EDDEGSEESGTDGEEEEDW-VDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIV
        E++ G  +    GEEE+   V    K    +V +  +    LH       D    EH   +LD +   H E EKKIG GI    +  HP ++ SRC F+V
Subjt:  EDDEGSEESGTDGEEEEDW-VDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIV

Query:  RKDGELVDFSYWKCIKGLI
        R+D    DFS+ KC+  ++
Subjt:  RKDGELVDFSYWKCIKGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCCAGGCCAGAGGATGCGGATTGAAGAGAAATCCGAGAAAATTGGGAGAAAAACCATGCTCGGAAATCGCAGGCTACCATCTGATTCTCAATAGCTGCAAATTTAAGCT
CCTTGTTTCAATTGACAAGGGCATGGCCATGGCGTCTGTTTCGAAGCCACCGCCATTTCCGCCCTTTCACTCCCTAAATCCAAGCTTTCTCAACTCTTCACCAGTGATCT
TATGTTTTCCTATGCACCCAATGACGTCGCTTCACCCCTCCATACGTGCCCTAAAGACTGGGCCGGAAGGCAGTAGAATTCGAAGCCACGAAGAATATAGCTCGGATTTG
CTGCGGAAGCCGGTTGTTCCACCGGCGAAGGACTTCGCCAGAATATCGGAGGATGACGAGGGCAGCGAGGAGAGTGGTACTGACGGCGAAGAGGAAGAGGATTGGGTTGA
TTGGGAGGACAAGATTTTGGAGGATACCGTTCCTCTAGTTGGCTTTGTTAGGATGGTTCTTCACTCTGGAAAATATGGAAGTGGAGATAGATTAAGCCTGGAGCACGAGA
AAACGATTCTTGACAGGTTGCTTCCATACCATCCTGAATGTGAGAAGAAGATTGGATGTGGAATTGATTATATCACGATTGGATATCATCCTGATTTTGAAAGCTCAAGA
TGTTTATTCATAGTCAGAAAAGATGGAGAGTTAGTCGATTTCTCATATTGGAAGTGCATTAAGGGTCTGATCAGAAAGAACTATCCCCTCCATGCTGAAAGCTTCATTCT
TAGGCATTTTCGGCGACGTAGACGCAATTACCGTGGGTAG
mRNA sequenceShow/hide mRNA sequence
CCCGCCAGGCCAGAGGATGCGGATTGAAGAGAAATCCGAGAAAATTGGGAGAAAAACCATGCTCGGAAATCGCAGGCTACCATCTGATTCTCAATAGCTGCAAATTTAAG
CTCCTTGTTTCAATTGACAAGGGCATGGCCATGGCGTCTGTTTCGAAGCCACCGCCATTTCCGCCCTTTCACTCCCTAAATCCAAGCTTTCTCAACTCTTCACCAGTGAT
CTTATGTTTTCCTATGCACCCAATGACGTCGCTTCACCCCTCCATACGTGCCCTAAAGACTGGGCCGGAAGGCAGTAGAATTCGAAGCCACGAAGAATATAGCTCGGATT
TGCTGCGGAAGCCGGTTGTTCCACCGGCGAAGGACTTCGCCAGAATATCGGAGGATGACGAGGGCAGCGAGGAGAGTGGTACTGACGGCGAAGAGGAAGAGGATTGGGTT
GATTGGGAGGACAAGATTTTGGAGGATACCGTTCCTCTAGTTGGCTTTGTTAGGATGGTTCTTCACTCTGGAAAATATGGAAGTGGAGATAGATTAAGCCTGGAGCACGA
GAAAACGATTCTTGACAGGTTGCTTCCATACCATCCTGAATGTGAGAAGAAGATTGGATGTGGAATTGATTATATCACGATTGGATATCATCCTGATTTTGAAAGCTCAA
GATGTTTATTCATAGTCAGAAAAGATGGAGAGTTAGTCGATTTCTCATATTGGAAGTGCATTAAGGGTCTGATCAGAAAGAACTATCCCCTCCATGCTGAAAGCTTCATT
CTTAGGCATTTTCGGCGACGTAGACGCAATTACCGTGGGTAGCACATGCAAGGATTTGTTAATCATACTATGCATCATTCAATTTCCGGAATTCTTTGAATATCGATGCT
TGAAATTGACCTACCACCCTTGTGTGGTTTTGTTGTTTAATGATTTGAAATGCGTGAATCAAGATGGATATAGGGGGAATGTAGACTCTTGCTTGAGGAAGGTGCTAGTG
AAATTCAATTTTGTAAATCTTATCAGTTACTACTCGTTTTACTTGATCCAATTTCTGCTTAATCTCCAGTGGCTGCAACTGATGATTGATGAACTCTTCACTTCCTAATA
ATGGATTAAACAGGTATCTGCTTGCTCTCCTCGACCACGGCTTACGTGAAATGGTATGCTGCAACCACTTTGCTCGACTTGGAACTTGAGTTCCTTTTACATCCTATGGC
GACATTCTGCAGCTTTAGCGTTTGTCTAAACTCTCTGTTTTGATTCTTCTAGTCTTGGCATCTTACTGTTCAGAGCCACTTACGTGTGTGTAATTCATAGCCATTATTAT
TATTATTATTATTATTATTATTATTATTATTATTATGGAGCTATTGAATTTTCTTACATCAGTGAACGGTAAGTTAATGCTGATTTAGGAACAATAGTAGGTTTTTTT
Protein sequenceShow/hide protein sequence
RQARGCGLKRNPRKLGEKPCSEIAGYHLILNSCKFKLLVSIDKGMAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHEEYSSDL
LRKPVVPPAKDFARISEDDEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSR
CLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRNYRG