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MC11g0303 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0303
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPre-mRNA-processing protein 40A isoform X1
Genome locationMC11:2396373..2396747
RNA-Seq ExpressionMC11g0303
SyntenyMC11g0303
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064468.1 hypothetical protein E6C27_scaffold255G001830 [Cucumis melo var. makuwa]7.63e-4665.04Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDG--DVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWIK
        NKTHSRGRVAFSWE +PGVCK+A VAPP+   D   D  + K+L+PPPC+ ARKGN+KL + +G AEDPFLAAYRECT +    N K  KN  GFGGW+ 
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDG--DVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWIK

Query:  M--FGTLSCKHFTAVRDDSLISS
        M  FG LSCK  TAVRDDSLISS
Subjt:  M--FGTLSCKHFTAVRDDSLISS

KAE8649893.1 hypothetical protein Csa_012691 [Cucumis sativus]1.76e-3275.64Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGD
        NKTHSRGRVAFSWE KPGVCK+A VAPPH   DGD  + KQL+PPPC+ ARKGN+KLQKD G AEDPFLAAY+ECT +
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGD

KAF3960963.1 hypothetical protein CMV_014368 [Castanea mollissima]1.74e-1641.43Show/hide
Query:  NKTHSRGRVAFSWEKKPGV----------------------CKSAEVAPPHSRRDGDV-LMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTG
        +K HS G + FSWE KPGV                      C S+E A  +S  D  + L P    PP  SS++KG RK        EDPFLAAY+ECT 
Subjt:  NKTHSRGRVAFSWEKKPGV----------------------CKSAEVAPPHSRRDGDV-LMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTG

Query:  DQSSNNYKSHKNLSGFGGWIKMFGTLSCKHFTAVRDDSLI
         +S  N KS KN  GFG + K     SCK   +VRDDSL+
Subjt:  DQSSNNYKSHKNLSGFGGWIKMFGTLSCKHFTAVRDDSLI

KAG6591440.1 Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia]3.01e-2661.29Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGF
        N+ HSRGRVAFSWE KPG CK+A VAPP  R   D L  K+LRPPPC+SARKG +K+QKD G  EDPFLAA+REC+  +   N K  +N +GF
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGF

KAG7024319.1 hypothetical protein SDJN02_13133, partial [Cucurbita argyrosperma subsp. argyrosperma]2.99e-2961.29Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGF
        N+ HSRGRVAFSWE KPG CK+A VAPP  R   D L  K+LRPPPC+SARKG +K+QKD G  EDPFLAA+REC+  +   N K  +N +GF
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L2M9 Uncharacterized protein7.48e-5069.42Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWI--K
        NKTHSRGRVAFSWE KPGVCK+A VAPPH   DGD  + KQL+PPPC+ ARKGN+KLQKD G AEDPFLAAY+ECT +      K  KN SGFGGW+   
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWI--K

Query:  MFGTLSCKHFTAVRDDSLISS
         F  LSCK  TAVRDDSLISS
Subjt:  MFGTLSCKHFTAVRDDSLISS

A0A1R3HKK6 Uncharacterized protein1.73e-1537.06Show/hide
Query:  KTHSRGRVAFSWEKKPGVCK------------------------SAEVAPPHSRRDGDVLMPK-QLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECT
        K HS+G V FSWE KPGVCK                        +A V+  +S +D  +  P    +PP  SS+R+G +K       ++DPFLAAY+ECT
Subjt:  KTHSRGRVAFSWEKKPGVCK------------------------SAEVAPPHSRRDGDVLMPK-QLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECT

Query:  GDQSSNNYKSHKNLSGFGGWIKMFG--TLSCKHFTAVRDDSLI
          +S+N  K  KN++G G      G  + SCK   +VRDD+L+
Subjt:  GDQSSNNYKSHKNLSGFGGWIKMFG--TLSCKHFTAVRDDSLI

A0A2C9VZY0 Uncharacterized protein1.59e-1639.57Show/hide
Query:  KTHSRGRVAFSWEKKPGVCKS-----------AEVAPPH-----------SRRDGDV-LMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGD
        K H +G V FSWEKKPGV K+            ++ PP            S  D  + L P   +PP  SS+RKG  K Q      EDPFLAAY+ECT  
Subjt:  KTHSRGRVAFSWEKKPGVCKS-----------AEVAPPH-----------SRRDGDV-LMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGD

Query:  QSSNNYKSHKNLSGFGGWIKMFGTLSCKHFTAVRDDSLI
         S +N K+   L    G  K   +LSCK+  +VRDD+L+
Subjt:  QSSNNYKSHKNLSGFGGWIKMFGTLSCKHFTAVRDDSLI

A0A2N9EQJ5 Uncharacterized protein1.05e-1439.16Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPC--------------------------SSARKGNRKLQKDEGRAEDPFLAAYRE
        +K HS+G + FSWE KPGV K  +   P    DGD ++  +L PPPC                          SS++KG RK        EDPFLAAY E
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPC--------------------------SSARKGNRKLQKDEGRAEDPFLAAYRE

Query:  CTGDQSSNNYKSHKNLSGFGGWIKMFGTLSCKHFTAVRDDSLI
        CT  +S    KS KN  G  G+ K     SCK   +VRDDSL+
Subjt:  CTGDQSSNNYKSHKNLSGFGGWIKMFGTLSCKHFTAVRDDSLI

A0A5A7VA56 Uncharacterized protein3.69e-4665.04Show/hide
Query:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDG--DVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWIK
        NKTHSRGRVAFSWE +PGVCK+A VAPP+   D   D  + K+L+PPPC+ ARKGN+KL + +G AEDPFLAAYRECT +    N K  KN  GFGGW+ 
Subjt:  NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDG--DVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWIK

Query:  M--FGTLSCKHFTAVRDDSLISS
        M  FG LSCK  TAVRDDSLISS
Subjt:  M--FGTLSCKHFTAVRDDSLISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAAAACCCATTCAAGAGGCAGAGTGGCTTTCTCGTGGGAGAAGAAGCCAGGGGTGTGTAAATCAGCAGAGGTGGCGCCGCCGCACAGCCGCCGCGACGGCGAC
GTTCTGATGCCGAAGCAGCTCCGGCCACCGCCTTGTTCTTCGGCGAGAAAAGGGAACAGAAAGCTGCAGAAAGACGAGGGGCGCGCTGAAGACCCGTTTCTTGCG
GCCTATAGGGAGTGCACCGGAGATCAGAGTAGTAATAATTACAAGTCGCACAAAAATTTGTCTGGTTTTGGAGGGTGGATAAAAATGTTTGGTACTTTGTCCTGC
AAGCACTTCACGGCGGTTCGAGATGATAGTTTGATCAGTTCTTCTTCTTCTTCTTCTTCT
mRNA sequenceShow/hide mRNA sequence
AACAAAACCCATTCAAGAGGCAGAGTGGCTTTCTCGTGGGAGAAGAAGCCAGGGGTGTGTAAATCAGCAGAGGTGGCGCCGCCGCACAGCCGCCGCGACGGCGAC
GTTCTGATGCCGAAGCAGCTCCGGCCACCGCCTTGTTCTTCGGCGAGAAAAGGGAACAGAAAGCTGCAGAAAGACGAGGGGCGCGCTGAAGACCCGTTTCTTGCG
GCCTATAGGGAGTGCACCGGAGATCAGAGTAGTAATAATTACAAGTCGCACAAAAATTTGTCTGGTTTTGGAGGGTGGATAAAAATGTTTGGTACTTTGTCCTGC
AAGCACTTCACGGCGGTTCGAGATGATAGTTTGATCAGTTCTTCTTCTTCTTCTTCTTCT
Protein sequenceShow/hide protein sequence
NKTHSRGRVAFSWEKKPGVCKSAEVAPPHSRRDGDVLMPKQLRPPPCSSARKGNRKLQKDEGRAEDPFLAAYRECTGDQSSNNYKSHKNLSGFGGWIKMFGTLSC
KHFTAVRDDSLISSSSSSSS