; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0305 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0305
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-binding protein 1-like
Genome locationMC11:2401337..2402454
RNA-Seq ExpressionMC11g0305
SyntenyMC11g0305
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136959.1 RNA-binding protein 1-like [Momordica charantia]2.59e-167100Show/hide
Query:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNC
        MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNC
Subjt:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNC

Query:  NSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRL
        NSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRL
Subjt:  NSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRL

Query:  LDPMAGNGRRNGNMSADAVPFQLNNRA
        LDPMAGNGRRNGNMSADAVPFQLNNRA
Subjt:  LDPMAGNGRRNGNMSADAVPFQLNNRA

XP_022940975.1 RNA-binding protein 1-like [Cucurbita moschata]1.43e-6955.98Show/hide
Query:  DQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPL
        DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPL
Subjt:  DQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPL

Query:  SP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMA
        S  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN FG  MFP P+ NS+++P YSS G  L  P+A
Subjt:  SP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMA

Query:  G----NGRRN--------GNMSADAVPFQLNNRA
        G    + RR          NMSADAVPF   ++A
Subjt:  G----NGRRN--------GNMSADAVPFQLNNRA

XP_022982410.1 RNA-binding protein 1-like [Cucurbita maxima]1.43e-6955.83Show/hide
Query:  RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQ
        RME   DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +  
Subjt:  RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQ

Query:  RGKSPLSP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGR
          KSPLS  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWY PN FG  MFP P+ NS+++P YSS G  
Subjt:  RGKSPLSP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGR

Query:  LLDPMAG----NGRRN--------GNMSADAVPFQLNNRA
        L  P+AG    + RR          NMSADAVPF   +RA
Subjt:  LLDPMAG----NGRRN--------GNMSADAVPFQLNNRA

XP_023524364.1 RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]1.24e-7056.25Show/hide
Query:  RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQ
        RME   DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +  
Subjt:  RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQ

Query:  RGKSPLSP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGR
          KSPLS  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN FG  MFP P+ NS+++P YSS G  
Subjt:  RGKSPLSP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGR

Query:  LLDPMAG----NGRRN--------GNMSADAVPFQLNNRA
        L  P+AG    +GRR          NMSADAVPF   ++A
Subjt:  LLDPMAG----NGRRN--------GNMSADAVPFQLNNRA

XP_038898856.1 RNA-binding protein 1-like [Benincasa hispida]1.54e-8057.54Show/hide
Query:  SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCN--
        S+ RME+NNDQ RG+KIFVGGL ++LTE+EFK+YFEKFG+ITDVVVM DSVTNRPRGFGFITF+SVESV+ VLQ+NFHELNGRRVEVKRA+PK  N N  
Subjt:  SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCN--

Query:  ---SSNPQRGKSPL---SPHVPLYYPHFSSGPVVYPGYAPFPHY-------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSV
           ++  Q GKSPL   + +VP  YP++ S   VYPG+ PFPHY       YGS LYG+W +   +G       +     WY PN FG G+FP PY NS+
Subjt:  ---SSNPQRGKSPL---SPHVPLYYPHFSSGPVVYPGYAPFPHY-------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSV

Query:  IHPVYSSKGGRLLDPMAGNG----RRNGN----------MSADAVPFQLNNR
        I P+YSSKG  L D   GNG    RRNG           MSADAVPFQ+ +R
Subjt:  IHPVYSSKGGRLLDPMAGNG----RRNGN----------MSADAVPFQLNNR

TrEMBL top hitse value%identityAlignment
A0A0A0L563 RRM domain-containing protein3.47e-6750.6Show/hide
Query:  SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS-
        S+ RM++NNDQ RG+KIFVGGL ++LTE EF+SYFE FGQITDVVVM DSVTNRPRGFGF+TF+S+ESV+ VLQ NFHELNGRRVEVKRA+PK  N N  
Subjt:  SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS-

Query:  --SNPQRGKSPL---SPHVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA-------WYAPNVFGDGMFPSPY
           N +  KSPL   + +VP  YP++ SG  +YPG+  FPHY      YGS+ YG+W               P GSA       W+ PN F  GM P   
Subjt:  --SNPQRGKSPL---SPHVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA-------WYAPNVFGDGMFPSPY

Query:  INSVIHP---VYSSKGGRLLDPMAGNGRRNGN----MSADAVPFQLNNR
         NS++HP   +Y      + +   G  ++N      MSADA PFQ+ +R
Subjt:  INSVIHP---VYSSKGGRLLDPMAGNGRRNGN----MSADAVPFQLNNR

A0A6A1UXZ2 RNA-binding protein 13.21e-5148.2Show/hide
Query:  SNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSN
        S+  ++ ++Q R KKIFVGGL + LTE EFK+YFE+FG +TDVVVM DS T RPRGFGF+TFDS ESV  V+ N+FHELNGR VEVKRAVPK  N +S  
Subjt:  SNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSN

Query:  PQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHY-------YGSSLYGSWHY-NGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSK
            +       P  YP +S G  + PGYAPF  +       YG S+YG W+   G    G    PLPL SAWY P   G   F  P+ ++ I P YSS 
Subjt:  PQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHY-------YGSSLYGSWHY-NGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSK

Query:  GGRLLDPMAGNGRRNGNMSADA
        G  ++D  AG   R G +  ++
Subjt:  GGRLLDPMAGNGRRNGNMSADA

A0A6J1C724 RNA-binding protein 1-like1.25e-167100Show/hide
Query:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNC
        MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNC
Subjt:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNC

Query:  NSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRL
        NSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRL
Subjt:  NSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRL

Query:  LDPMAGNGRRNGNMSADAVPFQLNNRA
        LDPMAGNGRRNGNMSADAVPFQLNNRA
Subjt:  LDPMAGNGRRNGNMSADAVPFQLNNRA

A0A6J1FS87 RNA-binding protein 1-like6.93e-7055.98Show/hide
Query:  DQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPL
        DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPL
Subjt:  DQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPL

Query:  SP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMA
        S  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN FG  MFP P+ NS+++P YSS G  L  P+A
Subjt:  SP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMA

Query:  G----NGRRN--------GNMSADAVPFQLNNRA
        G    + RR          NMSADAVPF   ++A
Subjt:  G----NGRRN--------GNMSADAVPFQLNNRA

A0A6J1J2K5 RNA-binding protein 1-like6.93e-7055.83Show/hide
Query:  RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQ
        RME   DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +  
Subjt:  RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQ

Query:  RGKSPLSP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGR
          KSPLS  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWY PN FG  MFP P+ NS+++P YSS G  
Subjt:  RGKSPLSP-HVPLYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGR

Query:  LLDPMAG----NGRRN--------GNMSADAVPFQLNNRA
        L  P+AG    + RR          NMSADAVPF   +RA
Subjt:  LLDPMAG----NGRRN--------GNMSADAVPFQLNNRA

SwissProt top hitse value%identityAlignment
Q8W034 Heterogeneous nuclear ribonucleoprotein 11.0e-2439.66Show/hide
Query:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCN
        N +++R    +  ++ KKIFVGGLP  LT+ EF+ YFE +G +TDV +M D  TNRPRGFGF++FDS ++V+ VL   FH+L+G++VEVKRA+PK+    
Subjt:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCN

Query:  SSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHY------------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA
         +NP  G   +       Y  +      Y G      +            YGSS YG+ + NG  G G+ A     GSA
Subjt:  SSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHY------------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA

Q96EP5 DAZ-associated protein 11.8e-1837.18Show/hide
Query:  NDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSP
        +D S+  KIFVGG+P +  E E + YF+KFG +T+VV++ D+   RPRGFGFITF+  +SV+  +  +FH++ G++VEVKRA P++    +   Q G S 
Subjt:  NDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSP

Query:  LSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGS
            V    P+ ++G   + G  P     G    G W   G    G+  PP   G+
Subjt:  LSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGS

Q98SJ2 DAZ-associated protein 12.4e-1834.97Show/hide
Query:  ESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRG
        E   + SR  KIFVGG+P +  E E K YF +FG +T+VV++ D+   RPRGFGFITF+  +SV+  +  +FH++ G++VEVKRA P++    +  P  G
Subjt:  ESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRG

Query:  KSPLSPHVPLYYPHFSSG--PVVYPGYAPFPHYYGSSLYGSWHYNGL----YG--TGHEAPPLPLGSAWYAPNVFGDGMFPSP
         +           +  +G  P  + GY+P          G W   G     YG   G   PP P   A +  +    G FP P
Subjt:  KSPLSPHVPLYYPHFSSG--PVVYPGYAPFPHYYGSSLYGSWHYNGL----YG--TGHEAPPLPLGSAWYAPNVFGDGMFPSP

Q9C652 RNA-binding protein 16.7e-2946.77Show/hide
Query:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPK----
        MN     M SN   SR KKIFVGGL S+ TE EFKSYFE+FG+ TDVVVM D VTNRPRGFGF+T+DS +SV  V+Q+NFHEL+ +RVEVKRA+PK    
Subjt:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPK----

Query:  --NRNCNSSNPQRGKSPLSPHVP--------LYYP------HFSSGPVVYP-GYAPFPHYYGSSLYGSWHYNGLYGTG-HEAPPLP
          N N  +  P       +P+VP        L +P      H +   V YP GY     +       SW+   +  TG + APP P
Subjt:  --NRNCNSSNPQRGKSPLSPHVP--------LYYP------HFSSGPVVYP-GYAPFPHYYGSSLYGSWHYNGLYGTG-HEAPPLP

Q9JII5 DAZ-associated protein 11.8e-1837.82Show/hide
Query:  NDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSP
        +D S+  KIFVGG+P +  E E + YF+KFG +T+VV++ D+   RPRGFGFITF+  +SV+  +  +FH++ G++VEVKRA P++   N +  Q G S 
Subjt:  NDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSP

Query:  LSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGS
            V    P  ++G   + G  P     G    G W   G    G+  PP   G+
Subjt:  LSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGS

Arabidopsis top hitse value%identityAlignment
AT1G58470.1 RNA-binding protein 14.7e-3046.77Show/hide
Query:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPK----
        MN     M SN   SR KKIFVGGL S+ TE EFKSYFE+FG+ TDVVVM D VTNRPRGFGF+T+DS +SV  V+Q+NFHEL+ +RVEVKRA+PK    
Subjt:  MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPK----

Query:  --NRNCNSSNPQRGKSPLSPHVP--------LYYP------HFSSGPVVYP-GYAPFPHYYGSSLYGSWHYNGLYGTG-HEAPPLP
          N N  +  P       +P+VP        L +P      H +   V YP GY     +       SW+   +  TG + APP P
Subjt:  --NRNCNSSNPQRGKSPLSPHVP--------LYYP------HFSSGPVVYP-GYAPFPHYYGSSLYGSWHYNGLYGTG-HEAPPLP

AT5G47620.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-2839.57Show/hide
Query:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----
        NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGFGFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+    
Subjt:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----

Query:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF
              N NS    R  S L+ +   + P   SG  V P            G++PF H YG  L    +    YG+G                    G F
Subjt:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF

Query:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS
          P+      P Y++  GR    M   G   GN S
Subjt:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS

AT5G47620.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-2839.57Show/hide
Query:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----
        NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGFGFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+    
Subjt:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----

Query:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF
              N NS    R  S L+ +   + P   SG  V P            G++PF H YG  L    +    YG+G                    G F
Subjt:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF

Query:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS
          P+      P Y++  GR    M   G   GN S
Subjt:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS

AT5G47620.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-2839.57Show/hide
Query:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----
        NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGFGFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+    
Subjt:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----

Query:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF
              N NS    R  S L+ +   + P   SG  V P            G++PF H YG  L    +    YG+G                    G F
Subjt:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF

Query:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS
          P+      P Y++  GR    M   G   GN S
Subjt:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS

AT5G47620.4 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-2839.57Show/hide
Query:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----
        NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGFGFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+    
Subjt:  NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN----

Query:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF
              N NS    R  S L+ +   + P   SG  V P            G++PF H YG  L    +    YG+G                    G F
Subjt:  -----RNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF

Query:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS
          P+      P Y++  GR    M   G   GN S
Subjt:  PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGAGTAGTAATAGAATGGAAAGCAACAATGATCAGTCCAGAGGCAAAAAGATTTTTGTAGGGGGTTTACCATCTGATTTAACTGAGAATGAGTTCAAA
AGCTACTTCGAAAAGTTTGGTCAGATAACAGATGTAGTTGTGATGCAAGATAGTGTAACAAACCGTCCTAGAGGATTTGGGTTCATCACATTTGATTCAGTGGAA
TCTGTAAACTATGTTCTGCAGAACAACTTCCATGAGTTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTCCCAAAGAATCGAAACTGCAACTCCTCCAACCCA
CAGAGAGGAAAAAGCCCTCTAAGCCCTCATGTTCCTTTGTATTATCCACATTTTAGTTCTGGACCTGTAGTTTATCCTGGTTATGCACCATTTCCACACTATTAT
GGCTCAAGCCTCTATGGGAGCTGGCACTACAATGGCTTATATGGCACTGGGCATGAGGCTCCTCCCTTGCCCTTGGGGAGTGCTTGGTATGCCCCAAATGTTTTT
GGTGATGGTATGTTTCCTTCGCCCTACATAAATTCTGTAATTCATCCTGTATATTCAAGCAAAGGAGGTAGGCTCTTAGATCCAATGGCTGGAAATGGAAGAAGA
AATGGAAATATGTCGGCTGATGCTGTGCCATTTCAGCTCAACAATAGAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGAGTAGTAATAGAATGGAAAGCAACAATGATCAGTCCAGAGGCAAAAAGATTTTTGTAGGGGGTTTACCATCTGATTTAACTGAGAATGAGTTCAAA
AGCTACTTCGAAAAGTTTGGTCAGATAACAGATGTAGTTGTGATGCAAGATAGTGTAACAAACCGTCCTAGAGGATTTGGGTTCATCACATTTGATTCAGTGGAA
TCTGTAAACTATGTTCTGCAGAACAACTTCCATGAGTTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTCCCAAAGAATCGAAACTGCAACTCCTCCAACCCA
CAGAGAGGAAAAAGCCCTCTAAGCCCTCATGTTCCTTTGTATTATCCACATTTTAGTTCTGGACCTGTAGTTTATCCTGGTTATGCACCATTTCCACACTATTAT
GGCTCAAGCCTCTATGGGAGCTGGCACTACAATGGCTTATATGGCACTGGGCATGAGGCTCCTCCCTTGCCCTTGGGGAGTGCTTGGTATGCCCCAAATGTTTTT
GGTGATGGTATGTTTCCTTCGCCCTACATAAATTCTGTAATTCATCCTGTATATTCAAGCAAAGGAGGTAGGCTCTTAGATCCAATGGCTGGAAATGGAAGAAGA
AATGGAAATATGTCGGCTGATGCTGTGCCATTTCAGCTCAACAATAGAGCTTGAAGGGATCTGGAACTCTTGCATATGGAAAACATTTATTATTGGTTTTGCACC
TTGGATAAGGGCATTTGGAGATTTTGTACATTCTGTTACTGCTATGGTGTCACATCCTCCTTTAGTTGTTTTTATTTTTATTTTTTTCTCAATCTATCTCTTTTC
ATGTCTTTAATTTTCATTCTTAACTCTATTTATTTGAACCCGTGTTTCATTTGTGGGATTTAGATATTTGTAATATAATTGTTTTAGGATTTGGATAATGACAAA
AAATTGTGTCATAAATAGAGATAATGCTGTGACAAAGAGGAGTGTTTCAAAGACCTGGCAGATGAGTATTGGGCCAAACATCTCATCTGTGATCTACTAATCAAT
AATTTTGTAGTTAGTTTAAGAGACGTTGGCGGGCAAGGGCTTGGAAATTCTCGAGAATAGAATCGGAT
Protein sequenceShow/hide protein sequence
MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNP
QRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRR
NGNMSADAVPFQLNNRA