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MC11g0320 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0320
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCRG16
Genome locationMC11:2527064..2527423
RNA-Seq ExpressionMC11g0320
SyntenyMC11g0320
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]1.69e-1875.76Show/hide
Query:  GMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
         MAAVS+ SF+A+VAVL  V S+A AQS E PAPAPASPATSVVPSLS  CV AF ALVFGSALKA
Subjt:  GMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]5.75e-1053.62Show/hide
Query:  KTSSGMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        + S  MA VS+AS +A++A++ AV S+AA ++   PAP+PASPATS+ PS    CVAAF AL FGS L+
Subjt:  KTSSGMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]1.87e-1972.22Show/hide
Query:  TLKTSSGMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        TL+    MAAVS+ SF+A+VAVL  V S+A AQS E PAPAPASPATSVVPSLS  CV AF ALVFGSALKA
Subjt:  TLKTSSGMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]2.34e-1875.38Show/hide
Query:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        MAAVS+ SF+A+VAVL AV S+A AQS E PAP PASPA SVVPSLSF CV AF AL+FGSALKA
Subjt:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]3.75e-0751.56Show/hide
Query:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        MAA+S+ S +A++A++ A+ S+AA ++   PAP+PASPATS+ PS    C+AAF AL FGS L+
Subjt:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

TrEMBL top hitse value%identityAlignment
A0A067KGJ5 Uncharacterized protein9.65e-0753.12Show/hide
Query:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        MA +S+AS IA++A+L+AV S  AA     PAPAPAS A ++ PS++  CVA+ AAL+FG  LK
Subjt:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

A0A0A0LKU1 Uncharacterized protein1.81e-0751.56Show/hide
Query:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        MAA+S+ S +A++A++ A+ S+AA ++   PAP+PASPATS+ PS    C+AAF AL FGS L+
Subjt:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

A0A2P5DTQ4 Arabinogalactan peptide1.01e-0650Show/hide
Query:  AAVSRASFIAIVAVLIAVFSIA-AAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        A+ S AS I ++AV++ V S+  AA + E PAP+PASPA+++ PS    C+AA  ALVFGSA++
Subjt:  AAVSRASFIAIVAVLIAVFSIA-AAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

A0A2P5EL16 Arabinogalactan peptide1.43e-0650.82Show/hide
Query:  SRASFIAIVAVLIAVFSIA-AAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        S AS I ++AV++ V S+  AA + E PAP+PASPA+++ PS    C+AA  ALVFGSA++
Subjt:  SRASFIAIVAVLIAVFSIA-AAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

Q96504 CRG161.13e-1875.38Show/hide
Query:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        MAAVS+ SF+A+VAVL AV S+A AQS E PAP PASPA SVVPSLSF CV AF AL+FGSALKA
Subjt:  MAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCCCGATTCCTCCCTCCTCCACTCGTTTTCAGCCGCCCTCTGTCTTTATATATACAGCCACTGCCCTTCCCTTTTCCGCTGTCCAAAGTTTCCTCTCCACTCT
CAATTTTCTTCGCTCTACCATCTTTTTCTCTCTTTCCAAACCCTAAAAACTTCCTCCGGAATGGCCGCCGTCTCCAGGGCTTCTTTCATCGCCATTGTGGCCGTT
CTAATCGCCGTGTTCTCCATCGCCGCCGCTCAATCCGTCGAGCCTCCCGCTCCCGCGCCAGCTTCTCCGGCCACCTCTGTCGTACCGTCGTTGAGCTTCGGTTGC
GTCGCTGCTTTCGCCGCTCTCGTCTTCGGATCTGCCCTTAAAGCT
mRNA sequenceShow/hide mRNA sequence
CTGCCCGATTCCTCCCTCCTCCACTCGTTTTCAGCCGCCCTCTGTCTTTATATATACAGCCACTGCCCTTCCCTTTTCCGCTGTCCAAAGTTTCCTCTCCACTCT
CAATTTTCTTCGCTCTACCATCTTTTTCTCTCTTTCCAAACCCTAAAAACTTCCTCCGGAATGGCCGCCGTCTCCAGGGCTTCTTTCATCGCCATTGTGGCCGTT
CTAATCGCCGTGTTCTCCATCGCCGCCGCTCAATCCGTCGAGCCTCCCGCTCCCGCGCCAGCTTCTCCGGCCACCTCTGTCGTACCGTCGTTGAGCTTCGGTTGC
GTCGCTGCTTTCGCCGCTCTCGTCTTCGGATCTGCCCTTAAAGCT
Protein sequenceShow/hide protein sequence
LPDSSLLHSFSAALCLYIYSHCPSLFRCPKFPLHSQFSSLYHLFLSFQTLKTSSGMAAVSRASFIAIVAVLIAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGC
VAAFAALVFGSALKA