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MC11g0346 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0346
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionleucine-rich repeat extensin-like protein 1
Genome locationMC11:2693452..2693862
RNA-Seq ExpressionMC11g0346
SyntenyMC11g0346
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649911.1 hypothetical protein Csa_012510 [Cucumis sativus]8.35e-3968.97Show/hide
Query:  GLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAG
        GL + A  LF A+S+AQMAVPS+G QLCISDCSTCPVICTAPPPP+   PPPP P         PP  P SY+ WG PPPPV NYF+GA+PSG+MPQT G
Subjt:  GLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAG

Query:  PRDYSYPYYYFYSSKS
        PRDYSYPYYYFYSS S
Subjt:  PRDYSYPYYYFYSSKS

KAG6608366.1 Conserved oligomeric Golgi complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]1.65e-2857.86Show/hide
Query:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPP-------LGPP-----SYFYWGSPPPPVPNYFV
        LGL V A ALFL  S+AQ+ VPS+G QLCIS C TCPV+CT P            PRS  T   PPP       +GPP     SYF  G PPPPV NY  
Subjt:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPP-------LGPP-----SYFYWGSPPPPVPNYFV

Query:  GAQPSGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVL
        GAQPSGQMPQT GPRDYSYPYYYFYSS   S S  STF++
Subjt:  GAQPSGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVL

XP_022940707.1 leucine-rich repeat extensin-like protein 2 [Cucurbita moschata]1.17e-2956.43Show/hide
Query:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPP-------LGPP-----SYFYWGSPPPPVPNYFV
        LGL V A ALFL  S+AQ+ VPS+G QLCIS C TCPV+CT P            PRS  T   PPP       +GPP     SYF  G P PPV NY  
Subjt:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPP-------LGPP-----SYFYWGSPPPPVPNYFV

Query:  GAQPSGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVL
        GAQPSGQMPQT GPRDYSYPYYYFYSS   S S   TF++
Subjt:  GAQPSGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVL

XP_022981722.1 leucine-rich repeat extensin-like protein 1 [Cucurbita maxima]1.57e-3658.62Show/hide
Query:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPP--------ILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQP
        LGL V A ALFL  S+AQ+ VPS+  QLCIS C TCPV+CT P P          + SPPPP P        PPP    SYF+ G PPPPV NY  GAQP
Subjt:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPP--------ILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQP

Query:  SGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV
        SGQMPQT GPRDYSYPYYYFYSS   S +  STF+L F C FH V
Subjt:  SGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV

XP_023523402.1 leucine-rich repeat extensin-like protein 2 [Cucurbita pepo subsp. pepo]6.63e-3661.19Show/hide
Query:  ALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDS---PPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAGPR
        A ALFL  S+AQ+ VPS+G QLCIS C TCPV+CT P P   ++   PPPP P        PPP    SYF  G PPPPV NY  GAQPSGQMPQT GPR
Subjt:  ALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDS---PPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAGPR

Query:  DYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV
        DYSYPYYYFYSS   S S  STF++ FVC FH V
Subjt:  DYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV

TrEMBL top hitse value%identityAlignment
A0A0A0L054 Microtubule associated protein (Ase1)1.40e-4566.18Show/hide
Query:  GLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAG
        GL + A  LF A+S+AQMAVPS+G QLCISDCSTCPVICTAPPPP+   PPPP P         PP  P SY+ WG PPPPV NYF+GA+PSG+MPQT G
Subjt:  GLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAG

Query:  PRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV
        PRDYSYPYYYFYSS S S +  S F++ FVCL HFV
Subjt:  PRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV

A0A2N9HA71 Uncharacterized protein3.40e-2250Show/hide
Query:  SEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDS------------PP------PPLPRSLPTLTWPPPLGPP---SYFYWGSPPPPVPNYFVGAQPS
        SE Q+  PSSG  LCISDC+TCPVIC+ PPPP+ +S            PP      PP P S P+   PPP  PP   SY  WG+PPPP   YF    PS
Subjt:  SEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDS------------PP------PPLPRSLPTLTWPPPLGPP---SYFYWGSPPPPVPNYFVGAQPS

Query:  G----QMPQTAGPRDYSYPYYYFYSSKSRSL----SPFSTFVLSFVCLFHFV
        G    +MP  AGP DY YPYYYFYSSK+ S     + F  F+L F  LFHFV
Subjt:  G----QMPQTAGPRDYSYPYYYFYSSKSRSL----SPFSTFVLSFVCLFHFV

A0A5N6RNK5 Uncharacterized protein3.45e-2449.65Show/hide
Query:  SEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPL----GPPS----------YFYWGSPPPPVPNYFVGAQPSGQM---P
        S  Q+  PS+  +LCISDC+TCPVIC+ PPPP+L S PPP P +  +   PPPL     PPS          Y  WGSPPPP   Y+    PSG +   P
Subjt:  SEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPL----GPPS----------YFYWGSPPPPVPNYFVGAQPSGQM---P

Query:  QTAG-PRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV
         T G PRDY YPYYYFY+S + SLS  ++FV   + LFHFV
Subjt:  QTAG-PRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV

A0A6J1FKD3 leucine-rich repeat extensin-like protein 25.68e-3056.43Show/hide
Query:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPP-------LGPP-----SYFYWGSPPPPVPNYFV
        LGL V A ALFL  S+AQ+ VPS+G QLCIS C TCPV+CT P            PRS  T   PPP       +GPP     SYF  G P PPV NY  
Subjt:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPP-------LGPP-----SYFYWGSPPPPVPNYFV

Query:  GAQPSGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVL
        GAQPSGQMPQT GPRDYSYPYYYFYSS   S S   TF++
Subjt:  GAQPSGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVL

A0A6J1IUS7 leucine-rich repeat extensin-like protein 17.60e-3758.62Show/hide
Query:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPP--------ILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQP
        LGL V A ALFL  S+AQ+ VPS+  QLCIS C TCPV+CT P P          + SPPPP P        PPP    SYF+ G PPPPV NY  GAQP
Subjt:  LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPP--------ILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQP

Query:  SGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV
        SGQMPQT GPRDYSYPYYYFYSS   S +  STF+L F C FH V
Subjt:  SGQMPQTAGPRDYSYPYYYFYSSKSRSLSPFSTFVLSFVCLFHFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11990.1 proline-rich family protein2.6e-0733.53Show/hide
Query:  LGLRVAALALFLAASEAQMAVPSSGGQ-------LCISDCSTCPVICTAPPP--------------PILDSPPPPLP--RSLPTLTW---PPPL------
        +GL V  +AL +      M V SS          LCIS+CSTCP IC+ PP               P+  SPPPP P   S P L+    PPPL      
Subjt:  LGLRVAALALFLAASEAQMAVPSSGGQ-------LCISDCSTCPVICTAPPP--------------PILDSPPPPLP--RSLPTLTW---PPPL------

Query:  GPPSYFYWGSPPPPVP--------NYFVGAQPSGQMPQTAGPRD--YSYPYYYFYSSKSRSLSPFSTFVLSFV
         PP ++Y+ S PPP P           V + P     Q+ G +   Y +PY+YFY++ + +L   S+F+++ V
Subjt:  GPPSYFYWGSPPPPVP--------NYFVGAQPSGQMPQTAGPRD--YSYPYYYFYSSKSRSLSPFSTFVLSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGGGCTTCGGGTTGCGGCATTGGCTCTGTTTTTAGCGGCGTCCGAGGCTCAAATGGCCGTGCCCTCGTCTGGCGGCCAGCTCTGCATCAGCGATTGCTCCACGTGTCC
GGTGATCTGTACGGCGCCACCCCCACCAATTCTCGACTCGCCGCCTCCGCCTCTGCCGAGGTCATTGCCGACTCTGACGTGGCCGCCGCCGCTGGGTCCTCCGTCTTATT
TTTACTGGGGTAGTCCGCCGCCGCCGGTTCCTAATTACTTCGTCGGCGCGCAGCCTTCGGGACAGATGCCTCAGACGGCGGGGCCTCGGGATTATTCTTACCCTTACTAC
TATTTCTACAGTTCAAAATCGCGTTCCCTCTCTCCGTTTTCCACGTTCGTTCTGTCCTTTGTATGTTTGTTTCATTTTGTT
mRNA sequenceShow/hide mRNA sequence
TTGGGGCTTCGGGTTGCGGCATTGGCTCTGTTTTTAGCGGCGTCCGAGGCTCAAATGGCCGTGCCCTCGTCTGGCGGCCAGCTCTGCATCAGCGATTGCTCCACGTGTCC
GGTGATCTGTACGGCGCCACCCCCACCAATTCTCGACTCGCCGCCTCCGCCTCTGCCGAGGTCATTGCCGACTCTGACGTGGCCGCCGCCGCTGGGTCCTCCGTCTTATT
TTTACTGGGGTAGTCCGCCGCCGCCGGTTCCTAATTACTTCGTCGGCGCGCAGCCTTCGGGACAGATGCCTCAGACGGCGGGGCCTCGGGATTATTCTTACCCTTACTAC
TATTTCTACAGTTCAAAATCGCGTTCCCTCTCTCCGTTTTCCACGTTCGTTCTGTCCTTTGTATGTTTGTTTCATTTTGTT
Protein sequenceShow/hide protein sequence
LGLRVAALALFLAASEAQMAVPSSGGQLCISDCSTCPVICTAPPPPILDSPPPPLPRSLPTLTWPPPLGPPSYFYWGSPPPPVPNYFVGAQPSGQMPQTAGPRDYSYPYY
YFYSSKSRSLSPFSTFVLSFVCLFHFV