; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0348 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0348
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRRM domain-containing protein
Genome locationMC11:2708828..2710701
RNA-Seq ExpressionMC11g0348
SyntenyMC11g0348
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452748.1 PREDICTED: RNA-binding protein 2-like isoform X1 [Cucumis melo]6.48e-12780.79Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP
        AGSVARS  STYSEAPPL+ SYPN+ SIDQWHTPP DY+ +DTNS G GAYGY D+G    YPEPVIGGVTSGV+A GY SPF DSLASQRQ+IAVGSSP
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP

Query:  GLLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGY
        G++G AD+GHERA+SL + R AEC P S RESNILFVDGLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEAK + AAM ALQGY
Subjt:  GLLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGY

Query:  KFDDKKPDSPALKVHFAHFPFRLPSNHED
        KFDDKKPDSPALK+ FAHFPFRLPSNH+D
Subjt:  KFDDKKPDSPALKVHFAHFPFRLPSNHED

XP_022138874.1 uncharacterized protein LOC111009933 [Momordica charantia]1.18e-165100Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
        GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL

Query:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFD
        LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFD
Subjt:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFD

Query:  DKKPDSPALKVHFAHFPFRLPSNHEDGR
        DKKPDSPALKVHFAHFPFRLPSNHEDGR
Subjt:  DKKPDSPALKVHFAHFPFRLPSNHEDGR

XP_038896812.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]4.62e-12981.74Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  STYSEAPPL TSYPN+ SIDQWH  PDYLQKDTNS G GAYGY D+G I NYPEPVIG V SG +AKGYTSPFEDSLASQRQ+IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQ-GYK
        ++GMAD  HERA+SL LR AE  P S+RESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKA VLCFVEF+EA+ A  AM ALQ GYK
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQ-GYK

Query:  FDDKKPDSPALKVHFAHFPFRLPSNHEDGR
        FDDKKPDSP+LK+ FAHFPFRLPSNH+D R
Subjt:  FDDKKPDSPALKVHFAHFPFRLPSNHEDGR

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]6.63e-13182.1Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  STYSEAPPL TSYPN+ SIDQWH  PDYLQKDTNS G GAYGY D+G I NYPEPVIG V SG +AKGYTSPFEDSLASQRQ+IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKF
        ++GMAD  HERA+SL LR AE  P S+RESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKA VLCFVEF+EA+ A  AM ALQGYKF
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKF

Query:  DDKKPDSPALKVHFAHFPFRLPSNHEDGR
        DDKKPDSP+LK+ FAHFPFRLPSNH+D R
Subjt:  DDKKPDSPALKVHFAHFPFRLPSNHEDGR

XP_038896814.1 nuclear speckle RNA-binding protein B-like isoform X3 [Benincasa hispida]1.28e-12881.66Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
        GSVARS  STYSEAPPL TSYPN+ SIDQWH  PDYLQKDTNS G GAYGY D+G I NYPEPVIG V SG +AKGYTSPFEDSLASQRQ+IAVGSSPG+
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL

Query:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQ-GYKF
        +GMAD  HERA+SL LR AE  P S+RESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKA VLCFVEF+EA+ A  AM ALQ GYKF
Subjt:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQ-GYKF

Query:  DDKKPDSPALKVHFAHFPFRLPSNHEDGR
        DDKKPDSP+LK+ FAHFPFRLPSNH+D R
Subjt:  DDKKPDSPALKVHFAHFPFRLPSNHEDGR

TrEMBL top hitse value%identityAlignment
A0A1S3BU06 RNA-binding protein 2-like isoform X13.14e-12780.79Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP
        AGSVARS  STYSEAPPL+ SYPN+ SIDQWHTPP DY+ +DTNS G GAYGY D+G    YPEPVIGGVTSGV+A GY SPF DSLASQRQ+IAVGSSP
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP

Query:  GLLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGY
        G++G AD+GHERA+SL + R AEC P S RESNILFVDGLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEAK + AAM ALQGY
Subjt:  GLLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGY

Query:  KFDDKKPDSPALKVHFAHFPFRLPSNHED
        KFDDKKPDSPALK+ FAHFPFRLPSNH+D
Subjt:  KFDDKKPDSPALKVHFAHFPFRLPSNHED

A0A1S3BUL5 RNA-binding protein 2-like isoform X28.68e-12780.7Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        GSVARS  STYSEAPPL+ SYPN+ SIDQWHTPP DY+ +DTNS G GAYGY D+G    YPEPVIGGVTSGV+A GY SPF DSLASQRQ+IAVGSSPG
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYK
        ++G AD+GHERA+SL + R AEC P S RESNILFVDGLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEAK + AAM ALQGYK
Subjt:  LLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYK

Query:  FDDKKPDSPALKVHFAHFPFRLPSNHED
        FDDKKPDSPALK+ FAHFPFRLPSNH+D
Subjt:  FDDKKPDSPALKVHFAHFPFRLPSNHED

A0A5D3D938 RNA-binding protein 2-like isoform X13.14e-12780.79Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP
        AGSVARS  STYSEAPPL+ SYPN+ SIDQWHTPP DY+ +DTNS G GAYGY D+G    YPEPVIGGVTSGV+A GY SPF DSLASQRQ+IAVGSSP
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPP-DYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP

Query:  GLLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGY
        G++G AD+GHERA+SL + R AEC P S RESNILFVDGLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVEAK + AAM ALQGY
Subjt:  GLLGMADMGHERASSLGL-RNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGY

Query:  KFDDKKPDSPALKVHFAHFPFRLPSNHED
        KFDDKKPDSPALK+ FAHFPFRLPSNH+D
Subjt:  KFDDKKPDSPALKVHFAHFPFRLPSNHED

A0A6J1CBB3 uncharacterized protein LOC1110099335.74e-166100Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
        GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL

Query:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFD
        LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFD
Subjt:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFD

Query:  DKKPDSPALKVHFAHFPFRLPSNHEDGR
        DKKPDSPALKVHFAHFPFRLPSNHEDGR
Subjt:  DKKPDSPALKVHFAHFPFRLPSNHEDGR

A0A6J1J4R2 RNA-binding protein 2-like1.69e-12679.48Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  S YSEAPPL TSYPN+ SID W  PPDYLQK+T+SSG G YGY D+G IRNYPEPVIGGVTSGV+A G TSPF D+ A QR +IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKF
        L+ MAD GHE+A+SLGLRN E VPIS  ESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRR GDKA VLCFVEF+EA+ + AAM ALQGYKF
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKF

Query:  DDKKPDSPALKVHFAHFPFRLPSNHEDGR
        DDKKPDS ALK+ FAHFPFRLPSNH+D R
Subjt:  DDKKPDSPALKVHFAHFPFRLPSNHEDGR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.8e-2140.52Show/hide
Query:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPD
        +G +    +G RN     + +  SN L+V+GLP++C+RREV H+FRPF+GY+++R+V K+ +       VLCFV+F    CA  A++ALQGY+ D+ + D
Subjt:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPD

Query:  SPALKVHFAHFPFRLP
        S  L++ F+  P   P
Subjt:  SPALKVHFAHFPFRLP

F4HWF9 Nuclear speckle RNA-binding protein B5.5e-2342.48Show/hide
Query:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKP
        DMG  +  S+G    E  P+    SN L+V+GLP++C+RREV H+FRPF+GY+++R+V ++ +       VLCFV+F  + CA  A++ALQ Y+ D+ +P
Subjt:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKP

Query:  DSPALKVHFAHFP
        DS  L++ F   P
Subjt:  DSPALKVHFAHFP

G7ID19 RNA-binding protein 29.4e-2346Show/hide
Query:  ECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPDSPALKVHFAHFPFR
        E +P+    S+ L+V+GLP+D T+REV H+FRPF+GY+++R+V KE +  G    +LCFV+F    CA  A++ALQGYK D+  P+S  L++ F+  P R
Subjt:  ECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPDSPALKVHFAHFPFR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 51.2e-1740.91Show/hide
Query:  GLLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYK
        G++GM   G      +G       P+    S+ L+++GLP +CTRREV H+FRPF+G++++R+V+KE R  G    VLCFV+F     A  A+ ALQG+ 
Subjt:  GLLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYK

Query:  FDDKKPDSPA
         DD    +PA
Subjt:  FDDKKPDSPA

Q8H0P8 RNA-binding protein 12.1e-2250.56Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPDSPALKVHFAHFP
        S  L+++GLP+DCTRREV H+FRPF+GY+++R+V KE +  GD   +LCFV+F    CA  A++ALQGYK D+  P+S  L++ F+ +P
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPDSPALKVHFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding3.9e-2442.48Show/hide
Query:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKP
        DMG  +  S+G    E  P+    SN L+V+GLP++C+RREV H+FRPF+GY+++R+V ++ +       VLCFV+F  + CA  A++ALQ Y+ D+ +P
Subjt:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKP

Query:  DSPALKVHFAHFP
        DS  L++ F   P
Subjt:  DSPALKVHFAHFP

AT1G21320.2 nucleotide binding;nucleic acid binding3.9e-2442.48Show/hide
Query:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKP
        DMG  +  S+G    E  P+    SN L+V+GLP++C+RREV H+FRPF+GY+++R+V ++ +       VLCFV+F  + CA  A++ALQ Y+ D+ +P
Subjt:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKP

Query:  DSPALKVHFAHFP
        DS  L++ F   P
Subjt:  DSPALKVHFAHFP

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2240.52Show/hide
Query:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPD
        +G +    +G RN     + +  SN L+V+GLP++C+RREV H+FRPF+GY+++R+V K+ +       VLCFV+F    CA  A++ALQGY+ D+ + D
Subjt:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPD

Query:  SPALKVHFAHFPFRLP
        S  L++ F+  P   P
Subjt:  SPALKVHFAHFPFRLP

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2240.52Show/hide
Query:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPD
        +G +    +G RN     + +  SN L+V+GLP++C+RREV H+FRPF+GY+++R+V K+ +       VLCFV+F    CA  A++ALQGY+ D+ + D
Subjt:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPD

Query:  SPALKVHFAHFPFRLP
        S  L++ F+  P   P
Subjt:  SPALKVHFAHFPFRLP

AT2G47580.1 spliceosomal protein U1A5.3e-0532Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKK
        +NILFV  LP + T   +  LF  + G+K++R++  +P         + FVEF +   +  AM  LQG+K    +
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGGAAGTGTAGCAAGGTCTAGCCATTCAACCTACTCTGAAGCACCTCCTTTGTCGACATCTTACCCTAATGCGGCCTCTATCGATCAGTGGCACACCCCTCCTGATTA
TTTGCAGAAAGATACAAATTCATCAGGAACTGGGGCTTATGGGTATGCTGACATAGGGGACATTAGAAATTATCCAGAACCAGTGATTGGCGGTGTGACATCTGGAGTGA
CTGCAAAGGGATACACATCTCCTTTTGAAGATTCATTAGCAAGTCAAAGACAAGAAATTGCAGTGGGCAGCAGTCCAGGGCTGTTGGGTATGGCTGACATGGGTCATGAA
AGGGCCAGTTCTCTCGGTCTCAGGAATGCTGAATGTGTTCCAATCTCAACTCGGGAATCGAATATTCTTTTTGTTGATGGACTTCCTACAGATTGTACTAGAAGAGAAGT
AGGCCATCTTTTCCGCCCCTTCATTGGCTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGTGGAGATAAGGCTGCGGTATTATGCTTTGTAGAGTTCGTTG
AAGCAAAGTGTGCGTGGGCTGCTATGGCAGCTCTTCAAGGCTATAAGTTCGATGACAAGAAACCTGATTCCCCAGCCTTGAAGGTTCATTTTGCACATTTTCCTTTCCGT
TTACCATCTAACCATGAAGATGGGCGATGA
mRNA sequenceShow/hide mRNA sequence
GCAGGAAGTGTAGCAAGGTCTAGCCATTCAACCTACTCTGAAGCACCTCCTTTGTCGACATCTTACCCTAATGCGGCCTCTATCGATCAGTGGCACACCCCTCCTGATTA
TTTGCAGAAAGATACAAATTCATCAGGAACTGGGGCTTATGGGTATGCTGACATAGGGGACATTAGAAATTATCCAGAACCAGTGATTGGCGGTGTGACATCTGGAGTGA
CTGCAAAGGGATACACATCTCCTTTTGAAGATTCATTAGCAAGTCAAAGACAAGAAATTGCAGTGGGCAGCAGTCCAGGGCTGTTGGGTATGGCTGACATGGGTCATGAA
AGGGCCAGTTCTCTCGGTCTCAGGAATGCTGAATGTGTTCCAATCTCAACTCGGGAATCGAATATTCTTTTTGTTGATGGACTTCCTACAGATTGTACTAGAAGAGAAGT
AGGCCATCTTTTCCGCCCCTTCATTGGCTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGTGGAGATAAGGCTGCGGTATTATGCTTTGTAGAGTTCGTTG
AAGCAAAGTGTGCGTGGGCTGCTATGGCAGCTCTTCAAGGCTATAAGTTCGATGACAAGAAACCTGATTCCCCAGCCTTGAAGGTTCATTTTGCACATTTTCCTTTCCGT
TTACCATCTAACCATGAAGATGGGCGATGAATGAGTGCATATCCAACTCCTTCTGGAACTACGGAATTCTGAAGGGAATGACAGGTTTTTGACTGGCACTTTCATGATAC
AACTTATTGAGTAACCTTGCAGGATCGATACACGATTTCCTGGTTTTTAGGTGTTTTGTAGATCCTATGGACTGGTAAAGTTCATCCCGAACGCAGTCGAAATTCAAAGC
GGTATGAAGGAAGCATTTGGGAAAAATGGTTGTTATTACCATGATATCATATTATTATTACAAGTAGTTTTCAGTTTTTCTCGTGGGCTTTGATGAGCGAGTGCATACAA
GCTCTCCCTCCCTTTACTATGGGAGAAAAATAAAATGGGCTTTTTCCAAATTCCTGTTTGCTATTAATGCATTTTAAAAAAAATAATTTCGTAGGCT
Protein sequenceShow/hide protein sequence
AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDIRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGLLGMADMGHE
RASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAAVLCFVEFVEAKCAWAAMAALQGYKFDDKKPDSPALKVHFAHFPFR
LPSNHEDGR