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MC11g0430 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0430
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA ligase
Genome locationMC11:3392490..3392837
RNA-Seq ExpressionMC11g0430
SyntenyMC11g0430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031776.1 hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]3.46e-5679.65Show/hide
Query:  NEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYDDDF
        N+Y+  PFSFT KLKSSILCFR DHGD  ++E ++S R+PRSPLKS A+E  ELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDE  R DD+F
Subjt:  NEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYDDDF

Query:  PIRDFASRLPASP
        PIRDFASRLPASP
Subjt:  PIRDFASRLPASP

XP_022138148.1 uncharacterized protein LOC111009386 [Momordica charantia]8.81e-80100Show/hide
Query:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
        MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
Subjt:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        DDFPIRDFASRLPASP
Subjt:  DDFPIRDFASRLPASP

XP_022940408.1 uncharacterized protein LOC111446022 [Cucurbita moschata]8.76e-5778.45Show/hide
Query:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
        M+ N+Y+  PFSFT KLKSSILCFR DHGD  ++E ++S R+PRSPLKS A+E  ELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDE  R D
Subjt:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        D+FPIRDFASRLPASP
Subjt:  DDFPIRDFASRLPASP

XP_022981208.1 uncharacterized protein LOC111480417 [Cucurbita maxima]2.93e-5576.72Show/hide
Query:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
        M+ NEY+  PFSFT KLKSSI CFR DH D  + ED++S R+PRSPLKS A+E  E+RGMCRNLVARIGR RRRYHHSADFRYDPSSYALNFEDE  R D
Subjt:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        D+FPIRDFASRLPASP
Subjt:  DDFPIRDFASRLPASP

XP_023523424.1 uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]2.96e-5780.53Show/hide
Query:  NEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYDDDF
        N+Y+  PFSFT KLKSSILCFR DHGD  ++ED++S R+PRSPLKS A+E  ELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDE  R DD+F
Subjt:  NEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYDDDF

Query:  PIRDFASRLPASP
        PIRDFASRLPASP
Subjt:  PIRDFASRLPASP

TrEMBL top hitse value%identityAlignment
A0A0A0L4E2 Uncharacterized protein5.32e-4371.3Show/hide
Query:  NEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSP-LKSTASEHTELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEHARYDD
        N YN  PFSFTHKLKS I CFR DH    D E   +  SP SP LKS  S+  ELRGMCR+LVARI   SRRRYHHS DFRYDPSSYALNFEDE  RYDD
Subjt:  NEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSP-LKSTASEHTELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEHARYDD

Query:  DFPIRDFASRLPASP
        +FPIRDF SRLPASP
Subjt:  DFPIRDFASRLPASP

A0A5A7VBS3 DNA ligase1.19e-3968.1Show/hide
Query:  NEYNSSPFSFTHKLKSSI-LCFRADH-GDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEHARYD
        N YN  PFSFTHKLKSSI  CFR DH  +L ++ED+         LKS  S+  ELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDE  R D
Subjt:  NEYNSSPFSFTHKLKSSI-LCFRADH-GDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIG-RSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        ++FPIRDF SRLPASP
Subjt:  DDFPIRDFASRLPASP

A0A6J1CC83 uncharacterized protein LOC1110093864.27e-80100Show/hide
Query:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
        MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
Subjt:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        DDFPIRDFASRLPASP
Subjt:  DDFPIRDFASRLPASP

A0A6J1FP70 uncharacterized protein LOC1114460224.24e-5778.45Show/hide
Query:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
        M+ N+Y+  PFSFT KLKSSILCFR DHGD  ++E ++S R+PRSPLKS A+E  ELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDE  R D
Subjt:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        D+FPIRDFASRLPASP
Subjt:  DDFPIRDFASRLPASP

A0A6J1J1H3 uncharacterized protein LOC1114804171.42e-5576.72Show/hide
Query:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD
        M+ NEY+  PFSFT KLKSSI CFR DH D  + ED++S R+PRSPLKS A+E  E+RGMCRNLVARIGR RRRYHHSADFRYDPSSYALNFEDE  R D
Subjt:  MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYD

Query:  DDFPIRDFASRLPASP
        D+FPIRDFASRLPASP
Subjt:  DDFPIRDFASRLPASP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein5.6e-1142.4Show/hide
Query:  HKLKSSILCFRADHGDLGDHEDEASL-----RSPRSP---LKSTASEHTELRGMCRNLVARIGRSRR-----------RYHHS----ADFRYDPSSYALN
        H+++S I C  A+       E EA +     R+PRSP   LKSTA E  ELR  CR + +RI  + R            +HHS     DF YDP SYALN
Subjt:  HKLKSSILCFRADHGDLGDHEDEASL-----RSPRSP---LKSTASEHTELRGMCRNLVARIGRSRR-----------RYHHS----ADFRYDPSSYALN

Query:  FEDEHARYDDDFPIRDFASRLPASP
        FED + R DDD    +F +RLP SP
Subjt:  FEDEHARYDDDFPIRDFASRLPASP

AT5G35090.1 unknown protein2.0e-0834.59Show/hide
Query:  SFTHKLKSSIL---CFRADHGDLGDHEDEASLRSPRSPLKSTASEH---------------TELRGMCRNLVARI--------GRSRRRYHHSADFRYDP
        S   KLKS      CFR  +    D+  +    SP +  KST S H               ++    C++L+ R+        G  +    H+ADF YDP
Subjt:  SFTHKLKSSIL---CFRADHGDLGDHEDEASLRSPRSPLKSTASEH---------------TELRGMCRNLVARI--------GRSRRRYHHSADFRYDP

Query:  SSYALNFE--DEHARYDDDFPIRDFASRLPASP
        SSYALNF+  DE     D FP+R+F++RLP SP
Subjt:  SSYALNFE--DEHARYDDDFPIRDFASRLPASP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAACAACGAGTACAATTCATCTCCATTTTCCTTCACTCACAAGCTCAAATCCTCCATCCTCTGCTTCCGCGCCGACCATGGCGATTTGGGAGATCACGAAGACGA
AGCCTCTCTAAGGAGCCCTAGATCGCCGCTCAAATCCACGGCCAGCGAGCATACTGAGCTCCGGGGAATGTGCCGGAATCTGGTGGCGAGGATCGGCCGGAGCCGGCGGC
GGTACCATCACTCCGCGGATTTCAGATACGATCCTTCTAGCTATGCTCTTAATTTCGAGGACGAACACGCTCGCTACGATGACGACTTTCCGATTAGGGATTTCGCTTCG
AGATTGCCGGCGTCGCCG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAACAACGAGTACAATTCATCTCCATTTTCCTTCACTCACAAGCTCAAATCCTCCATCCTCTGCTTCCGCGCCGACCATGGCGATTTGGGAGATCACGAAGACGA
AGCCTCTCTAAGGAGCCCTAGATCGCCGCTCAAATCCACGGCCAGCGAGCATACTGAGCTCCGGGGAATGTGCCGGAATCTGGTGGCGAGGATCGGCCGGAGCCGGCGGC
GGTACCATCACTCCGCGGATTTCAGATACGATCCTTCTAGCTATGCTCTTAATTTCGAGGACGAACACGCTCGCTACGATGACGACTTTCCGATTAGGGATTTCGCTTCG
AGATTGCCGGCGTCGCCG
Protein sequenceShow/hide protein sequence
MLNNEYNSSPFSFTHKLKSSILCFRADHGDLGDHEDEASLRSPRSPLKSTASEHTELRGMCRNLVARIGRSRRRYHHSADFRYDPSSYALNFEDEHARYDDDFPIRDFAS
RLPASP