; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0512 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0512
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionreplication protein A 32 kDa subunit A
Genome locationMC11:3963009..3967938
RNA-Seq ExpressionMC11g0512
SyntenyMC11g0512
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]8.44e-16084.48Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+SAK+RE+PGLVP TVKQISEA HSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMD+IQDGMYIRVNGHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ      +++G+ STQ QSSDS V   +Q+GSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         L S QHTVDVKKN DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYST+DEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]5.95e-16084.84Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+SAK+RE+PGLVP TVKQISEA HSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMD+IQDGMYIRVNGHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ      +++G+ STQ QSSDS V   +Q+GSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         L S QHTVDVKKN DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_022145139.1 replication protein A 32 kDa subunit A [Momordica charantia]9.70e-18496.39Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQ+       +G+ASTQSQSSDSTVNALVQSGSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]1.03e-16085.2Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+SAK+RE+PGLVP TVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMD+IQDGMYIRVNGHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ      +++G+ STQ QSSDS V   +Q+GSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         L S QHTVDVKKN DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_023524340.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]1.70e-15985.92Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+ +KSRE+PG+VPVTVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMD+IQDGMY+RV GHLKIFQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ        +G  STQ QSSDS+V   VQSGSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         LSS QHTVDVKKN D+LVLDYLQLPSSVAKE+GIHRDELSQQLKIPLEKI+DSIRSLEDEGLIYSTIDE+HFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein2.51e-15481.95Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSS+QFDS SGFTSSQ  DS+SAKSRESPGL+PVTVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DT QM++IQDGMY+RVNGHLK+FQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ      ++ G  STQ Q+SDS V   VQ+GS+GY T SS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         + S QHTVDVKK+ D+LVLDYLQLPSSVAKE+GIH+DELSQQLK+P+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like7.52e-15683.39Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSS+QFDSGSGFTSSQ  DS+SAKSRESPGLVPVTVKQISEA HSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQM++IQDGMY+RVNGHLK+FQ N QIFAFSVRPVTN DEITFHF+ECIHD+LRNSKLQ      ++ G  STQ Q+SDS V   VQ+GSSGY T SS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         + S QHTVDVKK+ D+LVLDYLQLPSSVAKE+GIHRDELSQQLKIP+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A4.70e-18496.39Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQ+       +G+ASTQSQSSDSTVNALVQSGSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like4.98e-16185.2Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+SAK+RE+PGLVP TVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMD+IQDGMYIRVNGHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ      +++G+ STQ QSSDS V   +Q+GSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         L S QHTVDVKKN DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  ELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like1.71e-15783.87Show/hide
Query:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQ  DS+SAK+RE+PGLVP TVKQISEA HSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTF

Query:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS
        DTKQMD+IQDGMYIRVNGHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ      +++G+ STQ QSSDS V   +Q+GSSGYQTASS
Subjt:  DTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASS

Query:  E--LSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
           L S QHTVDVKKN DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  E--LSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.8e-2337.5Show/hide
Query:  SGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHS-----GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTK
        S +G  ++  P  +  +     G VP TV  IS +F +     G     F I+GV+ TNV ++G+V     R+TD+ F +DD TG+I   RW+ D  DT+
Subjt:  SGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHS-----GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTK

Query:  QMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRN--SKLQ
            IQ+G+Y++V  +L  FQ   Q  A S+RP+ N +E+  HFIEC+H +L +  SK+Q
Subjt:  QMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRN--SKLQ

Q6H7J5 Replication protein A 32 kDa subunit B3.2e-4135.82Show/hide
Query:  SSSQFDSGSGFTSSQVPDSTSA---------KSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCK
        ++S    G GF  SQ  ++            KSR +  L+P+TVKQI +A  + ++K+NF +NG++++ V +VG++  K +R TD++F +DDGTGR+   
Subjt:  SSSQFDSGSGFTSSQVPDSTSA---------KSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCK

Query:  RWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSS
        RW ND+ DTK+M DIQ+G Y+ VNG LK FQG  Q+ A+SVR +TN +++T HF+ C+H +L  ++ +  +      G    Q+   DS     +    S
Subjt:  RWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSS

Query:  GYQTASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKS
             +S  S+ Q+T     N  DLVL+    P+ +  + G+  D +S++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  GYQTASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A6.2e-4540.89Show/hide
Query:  MFSSSQFD--SGSGFTSSQ---VPDSTSAKSRESPGLVPVTVKQISEAFHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGC
        M S SQ D  S S FTSSQ      +T +KSR +   +P+TVKQISEA  S   GE+ A FV++GV+  NV +VG VS K ERNTD++F +DDGTGR+  
Subjt:  MFSSSQFD--SGSGFTSSQ---VPDSTSAKSRESPGLVPVTVKQISEAFHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGC

Query:  KRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGS
         RWVND  D+ +   +Q+GMY+ V G LK  Q   +  AF++RPVT+ +E+T HFI+C+  +L N+K Q+                S   T +A+  S S
Subjt:  KRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGS

Query:  SGYQTASSELSSGQHTVDV-------KKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSA
        +G+   ++  S   +   V       K + +  VL+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  SGYQTASSELSSGQHTVDV-------KKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B4.7e-4539.15Show/hide
Query:  FSSSQFDSGSGFTSSQV-----PDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWV
        F  +   +G GF  SQ        S+S K+R+   L+P+T+KQ+S A  +GE  +NF I+GVDI  V IVG++S    R T + FVVDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQV-----PDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWV

Query:  NDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQ
        +   +T++M+ ++ GMY+R++GHLKIFQG   +  FSVRPVT+ +EI  HF EC++ ++ N+KL+    G+     A+ + Q   ST    + + +  YQ
Subjt:  NDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQ

Query:  TASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        T  S     Q   D        VL+YL  P  +  E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  TASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A3.4e-6750.17Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----VPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFVVDDGTGR
        MFSSSQF+     SG GF SSQ        S++AK+R+  GLVPVTVKQI+E F S  EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----VPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFVVDDGTGR

Query:  IGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQ
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQG  Q+  FSVRP+ + +E+TFH+IECIH Y +NS+ Q    G DV     TQS      VN   Q
Subjt:  IGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQ

Query:  SGSSGYQTA--SSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK
         GS+  Q    +  +SS  +  + +KN DD++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  SGSSGYQTA--SSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A22.4e-6850.17Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----VPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFVVDDGTGR
        MFSSSQF+     SG GF SSQ        S++AK+R+  GLVPVTVKQI+E F S  EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----VPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFVVDDGTGR

Query:  IGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQ
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQG  Q+  FSVRP+ + +E+TFH+IECIH Y +NS+ Q    G DV     TQS      VN   Q
Subjt:  IGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQ

Query:  SGSSGYQTA--SSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK
         GS+  Q    +  +SS  +  + +KN DD++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  SGSSGYQTA--SSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A22.4e-6850.17Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----VPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFVVDDGTGR
        MFSSSQF+     SG GF SSQ        S++AK+R+  GLVPVTVKQI+E F S  EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----VPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFVVDDGTGR

Query:  IGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQ
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQG  Q+  FSVRP+ + +E+TFH+IECIH Y +NS+ Q    G DV     TQS      VN   Q
Subjt:  IGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQ

Query:  SGSSGYQTA--SSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK
         GS+  Q    +  +SS  +  + +KN DD++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  SGSSGYQTA--SSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA323.4e-4639.15Show/hide
Query:  FSSSQFDSGSGFTSSQV-----PDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWV
        F  +   +G GF  SQ        S+S K+R+   L+P+T+KQ+S A  +GE  +NF I+GVDI  V IVG++S    R T + FVVDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQV-----PDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWV

Query:  NDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQ
        +   +T++M+ ++ GMY+R++GHLKIFQG   +  FSVRPVT+ +EI  HF EC++ ++ N+KL+    G+     A+ + Q   ST    + + +  YQ
Subjt:  NDTFDTKQMDDIQDGMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQ

Query:  TASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        T  S     Q   D        VL+YL  P  +  E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  TASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA321.7e-4539.84Show/hide
Query:  TSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLK
        +S ++R+   L+P+T+KQ+S A  +GE  +NF I+GVDI  V IVG++S    R T + FVVDDGTG + C RW +   +T++M+ ++ GMY+R++GHLK
Subjt:  TSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQDGMYIRVNGHLK

Query:  IFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASSELSSGQHTVDVKKNPDDLVLD
        IFQG   +  FSVRPVT+ +EI  HF EC++ ++ N+KL+    G+     A+ + Q   ST    + + +  YQT  S     Q   D        VL+
Subjt:  IFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASSELSSGQHTVDVKKNPDDLVLD

Query:  YLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        YL  P  +  E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  YLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCCCAGGTCCCCGACTCCACTTCGGCGAAGAGTCGAGAATCGCCGGGTTTAGTTCCAGTAACTGT
AAAACAGATAAGCGAAGCTTTCCATTCCGGCGAAGAGAAAGCCAACTTTGTAATCAATGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAAAAAGCTG
AAAGGAATACTGACATCACATTCGTTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACATTTGATACTAAGCAAATGGATGACATACAAGAC
GGAATGTACATACGGGTGAATGGGCATTTGAAAATATTTCAAGGCAACATGCAAATATTCGCATTTTCCGTAAGGCCTGTCACAAATTGTGATGAAATTACCTTCCACTT
TATTGAATGCATACATGACTACTTGCGGAATTCCAAGTTGCAGGTACTGATTGCTGGAGCTGATGTTGATGGTCTTGCATCAACACAATCCCAATCCTCGGATTCAACTG
TGAACGCCCTGGTGCAGAGTGGCTCGAGTGGATACCAGACAGCATCTTCAGAACTATCATCTGGGCAACACACTGTAGATGTTAAAAAGAATCCTGATGATTTGGTCCTT
GATTATCTGCAGCTGCCCTCCAGCGTAGCAAAAGAAAAGGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCTTTGGAGAAAATACTGGACTCCATTAGGTC
TCTTGAAGATGAAGGTTTGATATATTCCACCATTGATGAGTTTCATTTCAAGTCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
CATGAGCATCAATGGCGGGAAACAGAAAGCTTATACTTCACAAATCGATTCTCGAGAATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCCCAGGT
CCCCGACTCCACTTCGGCGAAGAGTCGAGAATCGCCGGGTTTAGTTCCAGTAACTGTAAAACAGATAAGCGAAGCTTTCCATTCCGGCGAAGAGAAAGCCAACTTTGTAA
TCAATGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAAAAAGCTGAAAGGAATACTGACATCACATTCGTTGTAGATGATGGAACAGGAAGAATTGGC
TGCAAAAGATGGGTAAACGATACATTTGATACTAAGCAAATGGATGACATACAAGACGGAATGTACATACGGGTGAATGGGCATTTGAAAATATTTCAAGGCAACATGCA
AATATTCGCATTTTCCGTAAGGCCTGTCACAAATTGTGATGAAATTACCTTCCACTTTATTGAATGCATACATGACTACTTGCGGAATTCCAAGTTGCAGGTACTGATTG
CTGGAGCTGATGTTGATGGTCTTGCATCAACACAATCCCAATCCTCGGATTCAACTGTGAACGCCCTGGTGCAGAGTGGCTCGAGTGGATACCAGACAGCATCTTCAGAA
CTATCATCTGGGCAACACACTGTAGATGTTAAAAAGAATCCTGATGATTTGGTCCTTGATTATCTGCAGCTGCCCTCCAGCGTAGCAAAAGAAAAGGGGATACACAGAGA
TGAACTTTCCCAACAACTGAAAATTCCTTTGGAGAAAATACTGGACTCCATTAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATTGATGAGTTTCATTTCAAGT
CTGCTGCATAGAATTGACAATTCTATAGGCTTTCTTTTCTTTATTTAATTTTACCATGCTCCATATGCTTTGAAATAGATCCATTTACTGCCTGACTTTCAACCTCAAAA
AGTTCAACGTATATGTATTTTTAAGCTTGATTGTCTAATCTCCTAAATTTTATTACCTATTTCTGTGGGTGAAGTAGAAAGCGATAATTAATTCTTTTCCTGGTCGGTTT
TGTCAAAAGGAGAAAATAAATAAATACTTTTACCGTTG
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQD
GMYIRVNGHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQVLIAGADVDGLASTQSQSSDSTVNALVQSGSSGYQTASSELSSGQHTVDVKKNPDDLVL
DYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKSAA