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MC11g0579 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0579
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionClassical arabinogalactan protein
Genome locationMC11:4518836..4519267
RNA-Seq ExpressionMC11g0579
SyntenyMC11g0579
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015885267.2 classical arabinogalactan protein 5 [Ziziphus jujuba]7.84e-1855.26Show/hide
Query:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPK--AAPPTAVATPPASTPSSSP-----APAGVSPAPSTGTSPPASAPASSPPAPPTAPSD
        A SAFV F +FALVAGS L QAP AAP +SPTK PPASSP   A+PP    TP  S P+SSP      P+  + +PS   SPPAS+P  SPPAPPT+   
Subjt:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPK--AAPPTAVATPPASTPSSSP-----APAGVSPAPSTGTSPPASAPASSPPAPPTAPSD

Query:  SPASTPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
         P+S   P  SI+  P+Q  SP S PGNGAALNRVAG GS+ A V ++++LL
Subjt:  SPASTPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

XP_018833931.2 classical arabinogalactan protein 10-like [Juglans regia]6.00e-1953.74Show/hide
Query:  ASSAFVFFVL-FALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPP-TAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPAST
        A S FV+ +L FALVAGS   QAPG AP  SPTK PPASSPKAAPP T  +TP   TPS + +P   +PAP++  +PP  AP+SSPPAPPT+P+ +P   
Subjt:  ASSAFVFFVL-FALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPP-TAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPAST

Query:  PTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
        P    SI+ PPS   SP  +PGNGAALN V+ TGS+ + ++++ LL+
Subjt:  PTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

XP_022937303.1 lysine-rich arabinogalactan protein 19-like [Cucurbita moschata]1.87e-4976.92Show/hide
Query:  SSAFVFFVLFALVAGSLGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTPTPE
        SSAFVF VL AL+AGSLGQAPGAAPASSPTK PP SSPK+AP   VATPPAS+PSSS AP+G +P+PSTGTSPPA +PA+SPPAPPTAPS+SPA TP P 
Subjt:  SSAFVFFVLFALVAGSLGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTPTPE

Query:  TSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
         SI+ PP+ APSPASTPGNG A+NR+A +GSII AVISSALLL
Subjt:  TSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

XP_030528693.1 classical arabinogalactan protein 10 [Rhodamnia argentea]9.11e-1855.06Show/hide
Query:  ASSAFVFFVLFALVAGS-LGQAPGAAP----ASSPTKPPPASSPKAAPPTAVATPPASTPS--SSPAPAGVSPAPSTGTSP---PASAPASSPPAPPTAP
        ASS+F + +LFAL+A S LGQAPG++P    A+SPTK PPA+SP A  P+ VATPPA TPS  S+P  +   PAPST T P   PAS+PASSPPAPP   
Subjt:  ASSAFVFFVLFALVAGS-LGQAPGAAP----ASSPTKPPPASSPKAAPPTAVATPPASTPS--SSPAPAGVSPAPSTGTSP---PASAPASSPPAPPTAP

Query:  SDSPASTP--TPETSIANPP-SQAPSPASTP-GNGAALNRVAGTGSIIAAVISSALLL
            ASTP   P  ++  PP + APSP  TP G+  ALNRVA  GS+ AAV++ ALL+
Subjt:  SDSPASTP--TPETSIANPP-SQAPSPASTP-GNGAALNRVAGTGSIIAAVISSALLL

XP_040997605.1 classical arabinogalactan protein 10-like [Juglans microcarpa x Juglans regia]2.04e-2053.42Show/hide
Query:  ASSAFVFFVL-FALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTP
        A S FV+ +L FALVAGS   QAPG AP  SPTK PPASSPKAAPP A  + P  +P+ + +P   +PAP++  +PP  AP+SSPPAPPT+   +P S P
Subjt:  ASSAFVFFVL-FALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTP

Query:  TPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
           TSI++PPS   SPA +PGNGAALN V+ TGS+ + ++++ LL+
Subjt:  TPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

TrEMBL top hitse value%identityAlignment
A0A218X9B5 classical arabinogalactan protein 91.05e-1249.32Show/hide
Query:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSS---PAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPAS
        A S F+F VLFAL AGS L QAPGAAP+  P+  PP S P +  P  VATPPA+TPS +   P P   SPAPS+ T PP S   +SPPAPP +P+ +P  
Subjt:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSS---PAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPAS

Query:  TPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
        TP   +S A PP+       +PG+GA  NR A  G++ AA +++AL+L
Subjt:  TPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

A0A2I4FQK5 classical arabinogalactan protein 10-like2.90e-1953.74Show/hide
Query:  ASSAFVFFVL-FALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPP-TAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPAST
        A S FV+ +L FALVAGS   QAPG AP  SPTK PPASSPKAAPP T  +TP   TPS + +P   +PAP++  +PP  AP+SSPPAPPT+P+ +P   
Subjt:  ASSAFVFFVL-FALVAGS-LGQAPGAAPASSPTKPPPASSPKAAPP-TAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPAST

Query:  PTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
        P    SI+ PPS   SP  +PGNGAALN V+ TGS+ + ++++ LL+
Subjt:  PTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

A0A5N6RKA1 Uncharacterized protein7.87e-1654.55Show/hide
Query:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPK-AAPPTAVATPPASTPSSSP--APAGVSPAPSTGT----SPPASAP-ASSPPAPPTA-P
        A S+FV  +L ALVA S L Q P AAP +SPTK PP S+P  AAPPTA    P S+P+SSP  +P   +PAP+  T    SP AS+P ASSPPAPPT+ P
Subjt:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPK-AAPPTAVATPPASTPSSSP--APAGVSPAPSTGT----SPPASAP-ASSPPAPPTA-P

Query:  SDSPASTPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
         +S  S  TP + I  PP    SP STPG+ AALNRVA TGS+ +A++++ALLL
Subjt:  SDSPASTPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

A0A6J1FFR5 lysine-rich arabinogalactan protein 19-like9.07e-5076.92Show/hide
Query:  SSAFVFFVLFALVAGSLGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTPTPE
        SSAFVF VL AL+AGSLGQAPGAAPASSPTK PP SSPK+AP   VATPPAS+PSSS AP+G +P+PSTGTSPPA +PA+SPPAPPTAPS+SPA TP P 
Subjt:  SSAFVFFVLFALVAGSLGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTPTPE

Query:  TSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
         SI+ PP+ APSPASTPGNG A+NR+A +GSII AVISSALLL
Subjt:  TSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

A0A6P4AHL3 classical arabinogalactan protein 53.80e-1855.26Show/hide
Query:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPK--AAPPTAVATPPASTPSSSP-----APAGVSPAPSTGTSPPASAPASSPPAPPTAPSD
        A SAFV F +FALVAGS L QAP AAP +SPTK PPASSP   A+PP    TP  S P+SSP      P+  + +PS   SPPAS+P  SPPAPPT+   
Subjt:  ASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKPPPASSPK--AAPPTAVATPPASTPSSSP-----APAGVSPAPSTGTSPPASAPASSPPAPPTAPSD

Query:  SPASTPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL
         P+S   P  SI+  P+Q  SP S PGNGAALNRVAG GS+ A V ++++LL
Subjt:  SPASTPTPETSIANPPSQAPSPASTPGNGAALNRVAGTGSIIAAVISSALLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTCCTCCGCTTTCGTGTTCTTCGTGCTATTCGCCTTGGTCGCCGGCTCCTTGGGCCAGGCTCCGGGCGCCGCTCCGGCTTCCTCTCCAACCAAACCGCCTCCGGCGTC
GTCGCCGAAAGCGGCTCCTCCGACTGCAGTAGCGACTCCTCCAGCGTCGACACCGTCTTCATCTCCTGCTCCGGCGGGCGTCTCTCCCGCTCCTTCCACTGGAACTTCAC
CACCAGCTTCGGCGCCGGCTTCTTCTCCACCTGCTCCTCCTACAGCTCCTTCAGATTCACCAGCGTCCACTCCGACTCCTGAAACTTCGATCGCAAACCCTCCGTCACAG
GCTCCGTCGCCAGCCTCTACTCCCGGCAATGGCGCTGCCTTGAACAGAGTCGCCGGCACCGGATCTATCATCGCGGCTGTAATTTCCTCGGCTCTACTTCTT
mRNA sequenceShow/hide mRNA sequence
GCTTCCTCCGCTTTCGTGTTCTTCGTGCTATTCGCCTTGGTCGCCGGCTCCTTGGGCCAGGCTCCGGGCGCCGCTCCGGCTTCCTCTCCAACCAAACCGCCTCCGGCGTC
GTCGCCGAAAGCGGCTCCTCCGACTGCAGTAGCGACTCCTCCAGCGTCGACACCGTCTTCATCTCCTGCTCCGGCGGGCGTCTCTCCCGCTCCTTCCACTGGAACTTCAC
CACCAGCTTCGGCGCCGGCTTCTTCTCCACCTGCTCCTCCTACAGCTCCTTCAGATTCACCAGCGTCCACTCCGACTCCTGAAACTTCGATCGCAAACCCTCCGTCACAG
GCTCCGTCGCCAGCCTCTACTCCCGGCAATGGCGCTGCCTTGAACAGAGTCGCCGGCACCGGATCTATCATCGCGGCTGTAATTTCCTCGGCTCTACTTCTT
Protein sequenceShow/hide protein sequence
ASSAFVFFVLFALVAGSLGQAPGAAPASSPTKPPPASSPKAAPPTAVATPPASTPSSSPAPAGVSPAPSTGTSPPASAPASSPPAPPTAPSDSPASTPTPETSIANPPSQ
APSPASTPGNGAALNRVAGTGSIIAAVISSALLL