CuGenDBv2

Gene ID	MC11g0698
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Genome location	MC11:5608432..5608827
RNA-Seq Expression	MC11g0698
Synteny	MC11g0698
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6608059.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

8.82e-82

90.91

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGLFRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP EVSRC KYEVKIRALQPSSSH+F P VI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

XP_022135315.1 uncharacterized protein At4g08330, chloroplastic [Momordica charantia]

1.82e-92

100

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

XP_022937411.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita moschata]

2.55e-83

90.91

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGLF+RR KLLCRKCGNHIGNA+TS  SS PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP+EVSRCMKYEVKIRALQPSSSH+ GPPVI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

XP_022981061.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita maxima]

2.53e-81

90.15

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGLFRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP EV+RC KYEVKIRALQPSSSH+F P VI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

XP_023523702.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita pepo subsp. pepo]

6.21e-82

90.91

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGLFRRR KLLCRKCGNHIGNA+TS + S PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP EVSRC KYEVKIRALQPSSSH+F P VI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C0S6 uncharacterized protein At4g08330, chloroplastic

8.81e-93

100

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

A0A6J1FA98 uncharacterized protein At4g08330, chloroplastic-like

1.24e-83

90.91

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGLF+RR KLLCRKCGNHIGNA+TS  SS PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP+EVSRCMKYEVKIRALQPSSSH+ GPPVI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

A0A6J1FN39 uncharacterized protein At4g08330, chloroplastic

5.81e-80

89.39

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGLFRRR KLLCRKC NHIGNA TS   S PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        S P EVSRC KYEVKIRALQPSSSH+F P VI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

A0A6J1II32 uncharacterized protein At4g08330, chloroplastic-like

5.62e-80

88.64

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGLF+RR KLLCRKCGNHIGNA+TS  SS PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP+EVSRCMKYEVKIRALQPSSSH+    VI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

A0A6J1IVF4 uncharacterized protein At4g08330, chloroplastic

1.22e-81

90.15

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGLFRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDS
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI
        SLP EV+RC KYEVKIRALQPSSSH+F P VI
Subjt:  SLPHEVSRCMKYEVKIRALQPSSSHDFGPPVI

SwissProt top hits

e value

%identity

Alignment

Q9STN5 Uncharacterized protein At4g08330, chloroplastic

2.1e-43

66.13

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Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCG+CGYELNLSS+NR TSTIGSKYGKS+K GIISF N+DE RF+QVDE QC+PHFS++SWGLFR RTKLLCRKC N+IGNA   +A    LV+  SD 
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSS
        + P  +    KY+++IR+LQPSS+
Subjt:  SLPHEVSRCMKYEVKIRALQPSSS

Arabidopsis top hits

e value

%identity

Alignment

AT4G08330.1 unknown protein

1.5e-44

66.13

Show/hide

Query:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS
        YSCG+CGYELNLSS+NR TSTIGSKYGKS+K GIISF N+DE RF+QVDE QC+PHFS++SWGLFR RTKLLCRKC N+IGNA   +A    LV+  SD 
Subjt:  YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDS

Query:  SLPHEVSRCMKYEVKIRALQPSSS
        + P  +    KY+++IR+LQPSS+
Subjt:  SLPHEVSRCMKYEVKIRALQPSSS

AT4G08330.2 unknown protein.

1.8e-37

62.61

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Query:  LNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDSSLPHEVSRC
        +N SS+NR TSTIGSKYGKS+K GIISF N+DE RF+QVDE QC+PHFS++SWGLFR RTKLLCRKC N+IGNA   +A    LV+  SD + P  +   
Subjt:  LNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDSSLPHEVSRC

Query:  MKYEVKIRALQPSSS
         KY+++IR+LQPSS+
Subjt:  MKYEVKIRALQPSSS

Sequences

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CDS sequence

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TACAGCTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATACATCGACCATTGGCTCTAAATATGGTAAATCAATAAAGCGAGGGATCATATCGTT
TCTAAACGTCGATGAGAGCAGATTTACACAAGTTGATGAACTTCAGTGTGTGCCTCATTTCTCAAAACACTCTTGGGGTCTGTTTCGACGAAGAACCAAACTACTTTGTC
GAAAGTGTGGAAACCATATTGGAAATGCTCACACTAGCCGTGCTTCCTCCATTCCACTTGTTTCAGATGGATCAGATTCATCCCTGCCCCATGAAGTCTCTAGGTGTATG
AAATATGAAGTAAAAATTCGTGCTTTACAACCCTCGTCTTCCCACGATTTTGGTCCCCCAGTTATT

mRNA sequence

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Protein sequence

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YSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDESRFTQVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHTSRASSIPLVSDGSDSSLPHEVSRCM
KYEVKIRALQPSSSHDFGPPVI

MC11g0698 (gene) of Bitter gourd (Dali-11) v1 genome