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MC11g0734 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0734
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein S12, mitochondrial
Genome locationMC11:5913604..5913708
RNA-Seq ExpressionMC11g0734
SyntenyMC11g0734
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0043229 - intracellular organelle (cellular component)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6736890.1 hypothetical protein POTOM_060180 [Populus tomentosa]1.77e-0563.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
QKI32043.1 ribosomal protein S12 [Ombrophytum subterraneum]2.11e-0561.36Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
YP_009173845.1 ribosomal protein S12 [Populus tremula]1.06e-0563.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
YP_009230378.1 ribosomal protein S12 [Salix suchowensis]1.14e-0563.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
YP_009239006.1 ribosomal protein S12 [Salix purpurea]1.06e-0563.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
TrEMBL top hitse value%identityAlignment
A0A140HP93 Ribosomal protein S125.14e-0663.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
A0A343DRA4 Ribosomal protein S125.14e-0663.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
A0A451FPL0 Ribosomal protein S125.14e-0663.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
A0A7G3UZ89 Ribosomal protein S12 (Fragment)4.61e-0659.09Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRHY         HN QEH +VL+ GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
A0A7G9ISY3 Ribosomal protein S125.14e-0663.64Show/hide
Query:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
        RKIVKVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRHY---------HNLQEHYVVLIGGGRVKDSRAV
SwissProt top hitse value%identityAlignment
P28520 Ribosomal protein S12, mitochondrial1.1e-0456.82Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HN QEH +VL+ GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
P60099 Ribosomal protein S12, mitochondrial1.5e-0460Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKD
        RKI KVRL+NRH          HNLQEH +VL+ GGRVKD
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKD
P68535 Ribosomal protein S12, mitochondrial3.0e-0561.36Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
P68536 Ribosomal protein S12, mitochondrial3.0e-0561.36Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HNLQEH +VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
Q96033 Ribosomal protein S12, mitochondrial1.1e-0462.5Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKD
        RKI KVRL+NRH          HNLQEH +VLI GGRVKD
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKD
Arabidopsis top hitse value%identityAlignment
AT2G07675.1 Ribosomal protein S12/S23 family protein1.4e-0559.09Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HN QEH  VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
ATMG00980.1 Ribosomal protein S12/S23 family protein1.4e-0559.09Show/hide
Query:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV
        RKI KVRL+NRH          HN QEH  VLI GGRVKDS  V
Subjt:  RKIVKVRLNNRH---------YHNLQEHYVVLIGGGRVKDSRAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTAAGATAGTTAAAGTACGGTTGAACAATCGACATTATCATAATTTGCAGGAGCATTATGTGGTGTTAATAGGAGGAGGTAGAGTGAAAGATTCGCGAGCTGTA
mRNA sequenceShow/hide mRNA sequence
CGTAAGATAGTTAAAGTACGGTTGAACAATCGACATTATCATAATTTGCAGGAGCATTATGTGGTGTTAATAGGAGGAGGTAGAGTGAAAGATTCGCGAGCTGTA
Protein sequenceShow/hide protein sequence
RKIVKVRLNNRHYHNLQEHYVVLIGGGRVKDSRAV