; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0748 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0748
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 7
Genome locationMC11:6055767..6056441
RNA-Seq ExpressionMC11g0748
SyntenyMC11g0748
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR017246 - Snapin
IPR028119 - Snapin/Pallidin/Snn1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143160.1 uncharacterized protein LOC111013092 [Momordica charantia]3.35e-8295.14Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP
        MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLD +    +ELDQLLEDAP
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP

Query:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
        FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
Subjt:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL

XP_022976873.1 uncharacterized protein LOC111477110 [Cucurbita maxima]1.23e-6177.62Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP
        MHSPE  L+  AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD I    TELDQLLEDAP
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP

Query:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN
        FPFIMQHASRIS+VRKRVLSLNSILRSIQRR+DNIDRAI+MGN
Subjt:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN

XP_023535159.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo]3.02e-6278.32Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP
        MHSPE  L+  AN+DSNVSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD I +   ELDQLLEDAP
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP

Query:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN
        FPFIMQHASRIS+VRKRVLSLNSILRSIQRR+DNIDRAI+MGN
Subjt:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN

XP_038897521.1 uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida]1.62e-6077.24Show/hide
Query:  MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDA
        MHSPE  + + SAN++SNV  ELE S+S NG L+EGN   N NLGN++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD +    TELDQLLEDA
Subjt:  MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDA

Query:  PFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
        PFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDRAI+MGNL
Subjt:  PFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL

XP_038897522.1 uncharacterized protein LOC120085558 isoform X6 [Benincasa hispida]1.42e-6077.24Show/hide
Query:  MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDA
        MHSPE  + + SAN++SNV  ELE S+S NG L+EGN   N NLGN++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD +    TELDQLLEDA
Subjt:  MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDA

Query:  PFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
        PFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDRAI+MGNL
Subjt:  PFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL

TrEMBL top hitse value%identityAlignment
A0A1S3BAU4 Biogenesis of lysosome-related organelles complex 1 subunit 78.75e-5975.86Show/hide
Query:  MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDA
        MH PE  + + SAN+DSNVS ELE S+S  G L+EGN   N NLGN++ +A GLSSML NIIRDFDSKADDTLKSQ+ LSSSLD +    TELDQLLEDA
Subjt:  MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDA

Query:  PFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
        PFPFIMQHASRISNVRKRVLSLNSILR+IQRRVDNIDRAI MGNL
Subjt:  PFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL

A0A6J1CN29 Biogenesis of lysosome-related organelles complex 1 subunit 71.62e-8295.14Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP
        MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLD +    +ELDQLLEDAP
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP

Query:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
        FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL
Subjt:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL

A0A6J1F9C2 Biogenesis of lysosome-related organelles complex 1 subunit 71.23e-6075.51Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLD----LIVLTLTELDQLL
        MHSPE  L+  AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD    +I  T TELDQLL
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLD----LIVLTLTELDQLL

Query:  EDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN
        E APFPFIMQHASRIS+VRKRVLSLNSIL SIQRR+DNIDRAI+MGN
Subjt:  EDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN

A0A6J1FEP4 Biogenesis of lysosome-related organelles complex 1 subunit 72.81e-6076.92Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP
        MHSPE  L+  AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD I    TELDQLLE AP
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP

Query:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN
        FPFIMQHASRIS+VRKRVLSLNSIL SIQRR+DNIDRAI+MGN
Subjt:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN

A0A6J1IKP2 Biogenesis of lysosome-related organelles complex 1 subunit 75.94e-6277.62Show/hide
Query:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP
        MHSPE  L+  AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NIIRDFDSKADDTLKSQSQLSSSLD I    TELDQLLEDAP
Subjt:  MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAP

Query:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN
        FPFIMQHASRIS+VRKRVLSLNSILRSIQRR+DNIDRAI+MGN
Subjt:  FPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79070.1 SNARE-associated protein-related1.0e-2560.82Show/hide
Query:  GNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIA
        G  + +A+GLS+ML ++I+DFDSKA DTL SQ +LS SLD +V    ELDQLLE+AP PFI+QHASRIS+V++RV SLN +L+S+QRR+DNID  ++
Subjt:  GNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGG
TATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAA
GCCAGAGCCAGCTTTCATCTTCCCTCGATCTTATTGTTTTAACTTTAACAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGG
ATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTA
mRNA sequenceShow/hide mRNA sequence
ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGG
TATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAA
GCCAGAGCCAGCTTTCATCTTCCCTCGATCTTATTGTTTTAACTTTAACAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGG
ATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTA
Protein sequenceShow/hide protein sequence
MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDLIVLTLTELDQLLEDAPFPFIMQHASR
ISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNL