; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0758 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0758
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionserine/arginine-rich splicing factor SR45
Genome locationMC11:6117170..6119021
RNA-Seq ExpressionMC11g0758
SyntenyMC11g0758
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034201 - RNPS1, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136021.1 serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia]5.80e-14396.96Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

XP_022136031.1 serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia]1.82e-14599.11Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
        AIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
Subjt:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR

Query:  HRSPPRPSPRRIRGSPVRRRSPPPP
        HRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  HRSPPRPSPRRIRGSPVRRRSPPPP

XP_022136040.1 serine/arginine-rich splicing factor SR45 isoform X3 [Momordica charantia]2.66e-14396.96Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

XP_022136048.1 serine/arginine-rich splicing factor SR45 isoform X4 [Momordica charantia]2.49e-14396.96Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

XP_038899577.1 serine/arginine-rich splicing factor SR45-like [Benincasa hispida]1.29e-13294.25Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRG-RSPSPLPR
        A  PKR GPK +NVG DAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSP RRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASP+RG RSPSPL R
Subjt:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRG-RSPSPLPR

Query:  RHRSPPRPSPRRIRGSPVRRRSPPPP
        RHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  RHRSPPRPSPRRIRGSPVRRRSPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0KZM9 RRM domain-containing protein1.30e-13293.83Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPP-RRRPASPIRG-RSPSPLP
        A  PKR+GPKPENVG DAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSP RRQPDSPRRRP+SPPRRR+ESPFRRDSPP RRRPASP+RG RSPSPL 
Subjt:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPP-RRRPASPIRG-RSPSPLP

Query:  RRHRSPPRPSPRRIRGSPVRRRSPPPP
        RRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  RRHRSPPRPSPRRIRGSPVRRRSPPPP

A0A6J1C2C4 serine/arginine-rich splicing factor SR45 isoform X12.81e-14396.96Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

A0A6J1C2D4 serine/arginine-rich splicing factor SR45 isoform X28.79e-14699.11Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTV

Query:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
        AIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR
Subjt:  AIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRR

Query:  HRSPPRPSPRRIRGSPVRRRSPPPP
        HRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  HRSPPRPSPRRIRGSPVRRRSPPPP

A0A6J1C2R4 serine/arginine-rich splicing factor SR45 isoform X31.29e-14396.96Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

A0A6J1C6J2 serine/arginine-rich splicing factor SR45 isoform X41.21e-14396.96Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
        RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPT

Query:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
        PPRTVAIAPKR+GPKPENVGA+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS
Subjt:  PPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPS

Query:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
        PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Subjt:  PLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

SwissProt top hitse value%identityAlignment
Q15287 RNA-binding protein with serine-rich domain 12.2e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q4R5N1 RNA-binding protein with serine-rich domain 12.2e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q5NVM8 RNA-binding protein with serine-rich domain 12.2e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q99M28 RNA-binding protein with serine-rich domain 12.2e-1640.38Show/hide
Query:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT
        R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I     L      P PP  
Subjt:  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRT

Query:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ
            P+R  P P           M R+  P  RR+  SPRRRSPV RR  SP RR+
Subjt:  VAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ

Q9SEE9 Serine/arginine-rich splicing factor SR457.2e-6869.96Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RNGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH
        R+ PK +N  ADAEKD   +R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+
Subjt:  RNGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH

Query:  RSPPRPSPRRIRGSPVRRRSPPP
        RSPPR SPRRIRGSPVRRRSP P
Subjt:  RSPPRPSPRRIRGSPVRRRSPPP

Arabidopsis top hitse value%identityAlignment
AT1G16610.1 arginine/serine-rich 455.1e-6969.96Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RNGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH
        R+ PK +N  ADAEKD   +R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+
Subjt:  RNGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH

Query:  RSPPRPSPRRIRGSPVRRRSPPP
        RSPPR SPRRIRGSPVRRRSP P
Subjt:  RSPPRPSPRRIRGSPVRRRSPPP

AT1G16610.2 arginine/serine-rich 454.8e-6768.78Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRHRS
        R+ PK +N  ADAEKD   R+    PR +  SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+RS
Subjt:  RNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRHRS

Query:  PPRPSPRRIRGSPVRRRSPPP
        PPR SPRRIRGSPVRRRSP P
Subjt:  PPRPSPRRIRGSPVRRRSPPP

AT1G16610.3 arginine/serine-rich 455.1e-6969.96Show/hide
Query:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK
        V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAEKAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APK
Subjt:  VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPK

Query:  RNGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH
        R+ PK +N  ADAEKD   +R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRRPASP RGRSP SP PRR+
Subjt:  RNGPKPENVGADAEKD-DMKRQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP-SPLPRRH

Query:  RSPPRPSPRRIRGSPVRRRSPPP
        RSPPR SPRRIRGSPVRRRSP P
Subjt:  RSPPRPSPRRIRGSPVRRRSPPP

AT2G29210.1 splicing factor PWI domain-containing protein1.5e-0441.89Show/hide
Query:  PQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF------RRDSPP
        P+R+++ +P R+ + +P R   +P + G        +R+R PS    PP+ RRRSP      SPP R     RRR  SPP RR  SP       R  SPP
Subjt:  PQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF------RRDSPP

Query:  RRRPASP---IRGRSPSPLPRRHRSPPRPSPRRIRGSPV--RRRSPPP
         RR  SP    R RSPSP  RR RSP  P+ RR   SP+  R RSP P
Subjt:  RRRPASP---IRGRSPSPLPRRHRSPPRPSPRRIRGSPV--RRRSPPP

AT3G13570.1 SC35-like splicing factor 30A2.0e-0430.6Show/hide
Query:  LSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGA
        L  +  +  LR  F  FG V ++ L  D     P+G+G+++F    DA +A+  MDG  + G  + V F    R+K PT  RT      R+     N   
Subjt:  LSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGA

Query:  DAEKDDMKRQREPSPRR------------KPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPP--------------RRRVESPFRRDSPPRRRPASPIR
        D  +   +  R P PRR             PP+ R +S    R  SP  R+ +  R    SPP              +    SP R  SP + R  +P +
Subjt:  DAEKDDMKRQREPSPRR------------KPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPP--------------RRRVESPFRRDSPPRRRPASPIR

Query:  GRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSP
         RS SP+PR+ RS P P P   RG+    RSP
Subjt:  GRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTAACTTTGGCGAAGTAGT
CAATGTTGAGCTGGCAATGGATCGTACAGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTG
CTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAAATGGTCCCAAG
CCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCTGTAGCTCGACG
TGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGA
GGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGT
TCCCCACCTCCTCCT
mRNA sequenceShow/hide mRNA sequence
AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTAACTTTGGCGAAGTAGT
CAATGTTGAGCTGGCAATGGATCGTACAGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTG
CTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAAATGGTCCCAAG
CCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCTGTAGCTCGACG
TGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGA
GGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGT
TCCCCACCTCCTCCT
Protein sequenceShow/hide protein sequence
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPK
PENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRR
SPPPP