; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0801 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0801
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC11:6673565..6674362
RNA-Seq ExpressionMC11g0801
SyntenyMC11g0801
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0048364 - root development (biological process)
GO:0048367 - shoot system development (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607949.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]6.82e-16386.09Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G+YGSPDAC+FNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL EAL+LKEDMVRV  ILPNASIYATLIKGFCGIG+L LAF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVT+KVK+DSAIYST ISALFKHGRKEEV  IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGCKPDVISFN+I+G LCK+GKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGYVPRSESINKLVD LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

KAG7037464.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.68e-16386.09Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG  PNVVTFGTLIYGLSLNSKL EAL+LKEDMVRV  ILPNASIYATLIKGFCGIG+L LAF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVT+KVK+DSAIYST ISA FKHGRKEEV +IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGCKPDVISFN+I+G LCK+GKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGYVPRSESINKLVD LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

XP_022131752.1 putative pentatricopeptide repeat-containing protein At1g53330 [Momordica charantia]7.57e-193100Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

XP_022941521.1 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita moschata]2.53e-16286.09Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL EAL+LKEDMVRV  ILPNASIYATLIKGFCG G+L LAF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVT+KVK+DSAIYST ISALFKHGRKEEV  IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGCKPDVISFN+I+G LCK+GKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGYVPRSESINKLVD LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

XP_023523314.1 putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo subsp. pepo]1.45e-16486.09Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL EAL+LKEDMVRV GILPNASIYATLIKGFCGIG+L LAF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVT+KVK+DSAIYST ISALFKHGRKEEV +IL EM ENGCKPDTVTYNAMI+G CKENDLESA++VLDEMV+KGCKPDVISFN+I+G LCK+GKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGYVPRSESINKL+D LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

TrEMBL top hitse value%identityAlignment
A0A1S3BT71 putative pentatricopeptide repeat-containing protein At1g533305.04e-15683.46Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G++GSPDACTFNILIHAA LCG+ D  W VFDEMRKRG+ PNVVTFGTLIYGLSLNSKLKEAL+LKEDMVRV  I PNASIY TLIKGFCG+GEL  AF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVTSKVK+DS IYSTLISALFKHGRKEEV DIL EM ENGCKPDT TYNAMI+GHCKENDLESA RV+DEMVEKGCKPDVISFN+IIG LCK+GK 
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLLEDMPRRGC PDV+SYR +FDGLCE MQL++ATSILDEMIFKGYVPR+ESINKLVD LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

A0A5A7VBA5 Putative pentatricopeptide repeat-containing protein1.03e-15683.46Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G++GSPDACTFNILIHAA LCG+ D  W VFDEMRKRG+ PNVVTFGTLIYGLSLNSKLKEAL+LKEDMVRV  I PNASIY TLIKGFCG+GEL  AF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVTSKVK+DS IYSTLISALFKHGRKEEV DIL EM ENGCKPDT TYNAMI+GHCKENDLESA RV+DEMVEKGCKPDVISFN+IIG LCK+GK 
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLLEDMPRRGC PDV+SYR +FDGLCE MQL++ATSILDEMIFKGYVPR+ESINKLVD LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

A0A6J1BRW9 putative pentatricopeptide repeat-containing protein At1g533303.67e-193100Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

A0A6J1FLC2 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g533301.23e-16286.09Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL EAL+LKEDMVRV  ILPNASIYATLIKGFCG G+L LAF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVT+KVK+DSAIYST ISALFKHGRKEEV  IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGCKPDVISFN+I+G LCK+GKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGYVPRSESINKLVD LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

A0A6J1J467 putative pentatricopeptide repeat-containing protein At1g533302.69e-16285.34Show/hide
Query:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE
        G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL EAL+LKEDMVRV  ILPNASIYATLIKGFCGIG+L LAF+
Subjt:  GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFE

Query:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW
        LKEEMVT+KVK+DSAIYST ISALFKHGRKEEV +IL EM ENGCKPDTVTYN MI+G CKENDLESA+RVLDEMV+KGCKPDVISFN+I+  LCK+GKW
Subjt:  LKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKW

Query:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        ++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGYVPRSESINKL+D LCQ
Subjt:  NEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

SwissProt top hitse value%identityAlignment
Q0WKV3 Pentatricopeptide repeat-containing protein At1g12300, mitochondrial2.3e-4434.1Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        P+  TF+ LI+   L G   +A E+ D M + G  P+++T  TL+ GL L+ K  EA+ L + MV   G  PNA  Y  ++   C  G+  LA EL  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
            +K+D+  YS +I  L KHG  +   ++  EM   G   + +TYN +I G C     +   ++L +M+++   P+V++F+ +I    K+GK  EA +
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        L ++M  RG +PD ++Y +L DG C+   L KA  ++D M+ KG  P   + N L++G C+
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099003.5e-4533.98Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        PD  T+ ILI A         A ++ DEMR RG  P+VVT+  L+ G+    +L EA+K   DM    G  PN   +  +++  C  G  + A +L  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
        +          ++ LI+ L + G      DIL +M ++GC+P++++YN ++ G CKE  ++ A   L+ MV +GC PD++++N+++  LCK GK  +A++
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGL
        +L  +  +GCSP +++Y T+ DGL +  +  KA  +LDEM  K   P + + + LV GL
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGL

Q9ASZ8 Pentatricopeptide repeat-containing protein At1g126209.2e-4636.02Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        PD  TF+ LI+   L G   +A E+ D M + G  P ++T   L+ GL LN K+ +A+ L + MV   G  PN   Y  ++K  C  G+  LA EL  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
           K+K+D+  YS +I  L K G  +   ++  EM   G K D + Y  +I G C     +   ++L +M+++   PDV++F+++I    K+GK  EA +
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        L ++M +RG SPD V+Y +L DG C+  QL KA  +LD M+ KG  P   + N L++G C+
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial1.5e-4333.72Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        PD   FN L++   L     +A E+ D M + G  P ++T  TL+ GL LN K+ +A+ L + MV   G  PN   Y  ++   C  G+  LA EL  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
            +K+D+  YS +I  L K G  +   ++  EM   G K D +TYN +I G C     +   ++L +M+++   P+V++F+ +I    K+GK  EA  
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        LL++M +RG +P+ ++Y +L DG C+  +L++A  ++D MI KG  P   + N L++G C+
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

Q9MAG8 Putative pentatricopeptide repeat-containing protein At1g533303.0e-8959.85Show/hide
Query:  YGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELK
        +G PDACT+NILIH     G  DDA ++FDEM K+ + P  VTFGTLI+GL  +S++KEALK+K DM++V G+ P   IYA+LIK  C IGEL  AF+LK
Subjt:  YGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELK

Query:  EEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNE
        +E    K+K+D+AIYSTLIS+L K GR  EV  IL EM E GCKPDTVTYN +I+G C END ESA RVLDEMVEKG KPDVIS+N I+G   +  KW E
Subjt:  EEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNE

Query:  AIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        A  L EDMPRRGCSPD +SYR +FDGLCE +Q ++A  ILDEM+FKGY PR + +   +  LC+
Subjt:  AIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

Arabidopsis top hitse value%identityAlignment
AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.5e-4633.98Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        PD  T+ ILI A         A ++ DEMR RG  P+VVT+  L+ G+    +L EA+K   DM    G  PN   +  +++  C  G  + A +L  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
        +          ++ LI+ L + G      DIL +M ++GC+P++++YN ++ G CKE  ++ A   L+ MV +GC PD++++N+++  LCK GK  +A++
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGL
        +L  +  +GCSP +++Y T+ DGL +  +  KA  +LDEM  K   P + + + LV GL
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGL

AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-4534.1Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        P+  TF+ LI+   L G   +A E+ D M + G  P+++T  TL+ GL L+ K  EA+ L + MV   G  PNA  Y  ++   C  G+  LA EL  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
            +K+D+  YS +I  L KHG  +   ++  EM   G   + +TYN +I G C     +   ++L +M+++   P+V++F+ +I    K+GK  EA +
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        L ++M  RG +PD ++Y +L DG C+   L KA  ++D M+ KG  P   + N L++G C+
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein6.5e-4736.02Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        PD  TF+ LI+   L G   +A E+ D M + G  P ++T   L+ GL LN K+ +A+ L + MV   G  PN   Y  ++K  C  G+  LA EL  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
           K+K+D+  YS +I  L K G  +   ++  EM   G K D + Y  +I G C     +   ++L +M+++   PDV++F+++I    K+GK  EA +
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        L ++M +RG SPD V+Y +L DG C+  QL KA  +LD M+ KG  P   + N L++G C+
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-4433.72Show/hide
Query:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM
        PD   FN L++   L     +A E+ D M + G  P ++T  TL+ GL LN K+ +A+ L + MV   G  PN   Y  ++   C  G+  LA EL  +M
Subjt:  PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEM

Query:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID
            +K+D+  YS +I  L K G  +   ++  EM   G K D +TYN +I G C     +   ++L +M+++   P+V++F+ +I    K+GK  EA  
Subjt:  VTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAID

Query:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        LL++M +RG +P+ ++Y +L DG C+  +L++A  ++D MI KG  P   + N L++G C+
Subjt:  LLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

AT1G53330.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-9059.85Show/hide
Query:  YGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELK
        +G PDACT+NILIH     G  DDA ++FDEM K+ + P  VTFGTLI+GL  +S++KEALK+K DM++V G+ P   IYA+LIK  C IGEL  AF+LK
Subjt:  YGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELK

Query:  EEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNE
        +E    K+K+D+AIYSTLIS+L K GR  EV  IL EM E GCKPDTVTYN +I+G C END ESA RVLDEMVEKG KPDVIS+N I+G   +  KW E
Subjt:  EEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNE

Query:  AIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ
        A  L EDMPRRGCSPD +SYR +FDGLCE +Q ++A  ILDEM+FKGY PR + +   +  LC+
Subjt:  AIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGTTATGGATCCCCAGATGCCTGTACTTTTAACATTTTGATTCATGCTGCCTATTTATGTGGGAATTCGGATGATGCATGGGAGGTGTTCGATGAAATGCGAAAGAG
AGGTATTCACCCTAATGTGGTCACTTTTGGAACTTTGATTTATGGCCTTTCTCTGAATTCTAAGTTGAAAGAAGCATTGAAATTGAAAGAAGATATGGTTAGAGTGTGTG
GGATTTTGCCTAATGCGTCTATATACGCTACTTTGATTAAAGGGTTCTGTGGGATTGGTGAATTGATTTTGGCTTTCGAACTAAAGGAAGAGATGGTGACAAGCAAGGTC
AAAATGGACTCAGCGATTTATTCTACTTTAATTAGCGCGCTCTTTAAACATGGAAGAAAAGAAGAAGTTTGTGACATTTTAGGAGAGATGAGAGAGAATGGGTGCAAACC
CGATACGGTAACCTACAATGCCATGATCAGTGGGCACTGTAAAGAAAACGATCTCGAATCTGCGTTTAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAGCCAGATG
TGATTAGTTTCAATTCTATCATCGGAGAGTTATGCAAAAAGGGGAAATGGAATGAAGCTATTGACTTACTTGAAGACATGCCTAGACGTGGGTGCTCTCCTGATGTGGTA
TCATACAGGACACTTTTTGATGGGCTTTGTGAAACGATGCAGTTACAGAAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTTCTGAAAGCAT
AAACAAACTCGTCGACGGGTTATGCCAG
mRNA sequenceShow/hide mRNA sequence
GGAAGTTATGGATCCCCAGATGCCTGTACTTTTAACATTTTGATTCATGCTGCCTATTTATGTGGGAATTCGGATGATGCATGGGAGGTGTTCGATGAAATGCGAAAGAG
AGGTATTCACCCTAATGTGGTCACTTTTGGAACTTTGATTTATGGCCTTTCTCTGAATTCTAAGTTGAAAGAAGCATTGAAATTGAAAGAAGATATGGTTAGAGTGTGTG
GGATTTTGCCTAATGCGTCTATATACGCTACTTTGATTAAAGGGTTCTGTGGGATTGGTGAATTGATTTTGGCTTTCGAACTAAAGGAAGAGATGGTGACAAGCAAGGTC
AAAATGGACTCAGCGATTTATTCTACTTTAATTAGCGCGCTCTTTAAACATGGAAGAAAAGAAGAAGTTTGTGACATTTTAGGAGAGATGAGAGAGAATGGGTGCAAACC
CGATACGGTAACCTACAATGCCATGATCAGTGGGCACTGTAAAGAAAACGATCTCGAATCTGCGTTTAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAGCCAGATG
TGATTAGTTTCAATTCTATCATCGGAGAGTTATGCAAAAAGGGGAAATGGAATGAAGCTATTGACTTACTTGAAGACATGCCTAGACGTGGGTGCTCTCCTGATGTGGTA
TCATACAGGACACTTTTTGATGGGCTTTGTGAAACGATGCAGTTACAGAAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTTCTGAAAGCAT
AAACAAACTCGTCGACGGGTTATGCCAG
Protein sequenceShow/hide protein sequence
GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKV
KMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVV
SYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ