; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0807 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0807
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L13
Genome locationMC11:6754669..6757433
RNA-Seq ExpressionMC11g0807
SyntenyMC11g0807
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.32e-16090.73Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST+NN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP+SSV Q+RAQELDRVPLEQRWMF+GDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022134203.1 50S ribosomal protein L13, chloroplastic [Momordica charantia]6.82e-178100Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]5.70e-16191.13Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST+NN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP+SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022981281.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]1.15e-16091.13Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST NN   SNR IPRKSLVAGFPLP SKSSFLQTQT ITL SKP+SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]8.09e-16191.13Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST+NNG  SNR +PR SLVAGFPL  SKSSFLQTQT ITL SKP+SSVLQ+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A6J1C1B3 50S ribosomal protein L13, chloroplastic3.30e-178100Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like6.22e-15889.11Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSST TF++HST+NNG+ SNRGIPRKS V GFPLP SKS  L TQT ITLNS+ +SS +Q+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like2.76e-16191.13Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST+NN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP+SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IPT4 50S ribosomal protein L13, chloroplastic-like5.96e-15688.31Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSST TF++HST+NNG+ SNRGI RKS V GF LP SKS  L TQT ITLNS+ +SS +Q+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like5.57e-16191.13Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP
        MAMLCASSSTATF LHST NN   SNR IPRKSLVAGFPLP SKSSFLQTQT ITL SKP+SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYP

Query:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH
        KA DHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B1WQT8 50S ribosomal protein L139.8e-5070.99Show/hide
Query:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK
        ++ WYV+DATD+ LGRLA  +A  +RGKN PTYTP +D G FVI++NA+KVAV+GRK T+KLYRRHSGRPGGMK+ETFE+LQQRIPERIIE AV+GMLPK
Subjt:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LGR LF  LKVY GP+HPH+AQKP EL +
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

P12629 50S ribosomal protein L13, chloroplastic1.3e-8163.2Show/hide
Query:  MLCASS----STATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTW
        M CASS    S  T       N   T     PR ++ A   +   KS+   T+         E+   +     +  VPL+QRWMF  +E  GPDIWNTTW
Subjt:  MLCASS----STATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTW

Query:  YPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERII
        YPK+ADHV T+K WYVVDATD ILGR+ASTIAIHIRGKNL +YTPSVDMGAFVIVVNA+KVAVSG+KRT+KLYRRHSGRPGG+K ETF+QLQ+RIPERII
Subjt:  YPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERII

Query:  EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        EHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P++LP+RDKRI  E+
Subjt:  EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L132.6e-5074.05Show/hide
Query:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK
        E+ WYVVDATDK LGRLAS IA+ +RGKN   YTP +D G FVIVVNAEKVAV+G+KRT+KLYRRHSGRPGGMK ETF +LQQR+PERI+EHAV+GMLPK
Subjt:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q8YPK6 50S ribosomal protein L137.5e-5073.28Show/hide
Query:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK
        E+ WYVVDATDK LGRLAS IA+ +RGKN   YTP +D G FVIVVNA+KVAV+G+KRT+KLYRRHSGRPGGMK ETF +LQQR+PERI+EHAV+GMLPK
Subjt:  EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic2.6e-8766.93Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQLRAQ-----ELDRVPLEQRWMFEGDELDGPDIW
        MA+LC+SS+         +++ +  + G  RKS   GF L   SK S    +  I  NSK     LQ++ +         VP  QRWMF+ +E +GPDIW
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQLRAQ-----ELDRVPLEQRWMFEGDELDGPDIW

Query:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP
        NTTWYPKA+DHVNT+K W+VVDATDKILGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSG+KR +KLYRRHSGRPGGM VETF+QLQQRIP
Subjt:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        ERI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein1.9e-8866.93Show/hide
Query:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQLRAQ-----ELDRVPLEQRWMFEGDELDGPDIW
        MA+LC+SS+         +++ +  + G  RKS   GF L   SK S    +  I  NSK     LQ++ +         VP  QRWMF+ +E +GPDIW
Subjt:  MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSKPESSVLQLRAQ-----ELDRVPLEQRWMFEGDELDGPDIW

Query:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP
        NTTWYPKA+DHVNT+K W+VVDATDKILGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSG+KR +KLYRRHSGRPGGM VETF+QLQQRIP
Subjt:  NTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        ERI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +GRK T+K YR H+G  G +K  + +    + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE

AT3G01790.2 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +GRK T+K YR H+G  G +K  + +    + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTATTTACATTCCACTATCAACAATGGAGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGG
TTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAACTGCGGGCTCAGGAGCTCGATC
GCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAA
ACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCCGTTCGTGGTATGCTTCCTAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTATTTACATTCCACTATCAACAATGGAGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGG
TTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAACTGCGGGCTCAGGAGCTCGATC
GCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAA
ACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCCGTTCGTGGTATGCTTCCTAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA
Protein sequenceShow/hide protein sequence
MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEK
TWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHEAQKPVELPIRDKRINKER