CuGenDBv2

Gene ID	MC11g0821
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA polymerase delta subunit 3
Genome location	MC11:6959684..6964422
RNA-Seq Expression	MC11g0821
Synteny	MC11g0821
Gene Ontology terms	GO:0006271 - DNA strand elongation involved in DNA replication (biological process) GO:0006297 - nucleotide-excision repair, DNA gap filling (biological process) GO:0006508 - proteolysis (biological process) GO:1904161 - DNA synthesis involved in UV-damage excision repair (biological process) GO:0005615 - extracellular space (cellular component) GO:0043625 - delta DNA polymerase complex (cellular component) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0034722 - gamma-glutamyl-peptidase activity (molecular function)
InterPro domains	IPR019038 - DNA polymerase delta subunit 3 IPR041913 - DNA polymerase delta subunit 3 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607919.1 DNA polymerase delta subunit 3, partial [Cucurbita argyrosperma subsp. sororia]

1.82e-257

74.72

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Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MA+IETLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLKNDP SYHIRLVS S+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++VDNCLRDN                  RFCGISNSYVKR I  +PA+ AAPQP+S V AESTKKN  CQN   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT
        PQ QK EM K +PNVGLQ P VVKEVKGE+N T SF Q SKP + K KV+SLPANKK+ QSDKTS +T GSL NLWGRVP KSKLSDN+ +V    ANPT
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT

Query:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS
        VSSAEAQICAHE +Q+ NSDDDDQ+VNIKRT N+SGRKRRVV+DFSDDEDF+DAV+LASPE PK QSCLD KQNTELH+E+  +NND+Q    LK+EE  
Subjt:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS

Query:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS
           SKQS   EKH +SS A KNE CAHEN +N REKP  AAPASP +RK+ LRT+IDERGREVNEVVWEGEEQEQKKDDV S KKSDHKAAE TTTNRP 
Subjt:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS

Query:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
         AKKSPALG+S  N   KAGAKK GNATGPKQGNILSFFK++
Subjt:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

XP_022147187.1 uncharacterized protein LOC111015930 [Momordica charantia]

0.0

96.42

Show/hide

Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQL
        QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDN                  RFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQL
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQL

Query:  QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPTVSS
        QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPTVSS
Subjt:  QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPTVSS

Query:  AEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQSSVGE
        AEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQSSVGE
Subjt:  AEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQSSVGE

Query:  KHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSA
        KHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRK VLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSA
Subjt:  KHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSA

Query:  TNPGVKAGAKKGGNATGPKQGNILSFFKRV
        TNPGVKAGAKKGGNATGPKQGNILSFFKRV
Subjt:  TNPGVKAGAKKGGNATGPKQGNILSFFKRV

XP_022941492.1 uncharacterized protein LOC111446774 [Cucurbita moschata]

2.11e-256

74.54

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Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MA+IETLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLKNDP SYHIRLVS S+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++V NCLRDN                  RFCGISNSYVKR I  +PA+ AAPQP+S V AESTKKN  CQN   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT
        PQ QK EM K +PNVGLQ P VVKEVKGE+N T SF Q SKP + K KV+SLPANKK+ QSDKTS +T GSL NLWGRVP KSKLSDN+ +V    ANPT
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT

Query:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS
        VSSAEAQICAHE +Q+ NSDDDDQ+VNIKRT N+SGRKRRVV+DFSDDEDF+DAV+LASPE PK QSCLD KQNTELH+E+  +NND+Q    LK+EE  
Subjt:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS

Query:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS
           SKQS   EKH +SS A KNE CAHEN +N REKP  AAPASP +RK+ LRT+IDERGREVNEVVWEGEEQEQKKDDV S KKSDHKAAE TTTNRP 
Subjt:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS

Query:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
         AKKSPALG+S  N   KAGAKK GNATGPKQGNILSFFK++
Subjt:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

XP_022982072.1 uncharacterized protein LOC111481028 [Cucurbita maxima]

2.59e-257

74.72

Show/hide

Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MA+I+TLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLKNDP SYHIRLVS S+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++VDNCLRDN                  RFCGISNSYVKR ID +PA+ AAPQP+S V AESTKKN  CQN   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT
        PQ QK EM K SPNVGLQ P VVKEV+GE+N T SF Q SKP + K KV+SLPA KKK QSDKTS +T  SL NLWGRVP KSKLSDN+ +V    ANPT
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT

Query:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS
        VSSAEAQICAHE +Q+ NSDDDDQ+VNIKRT N+ GRKRRVV+DFSDDEDF+DAV+LASPE PK QSCLD KQNTELH+EK  +NND Q    LK+EE  
Subjt:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS

Query:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS
           SKQS   +KH +SS A KNEVCAHEN +N REKPT AAPASP +RK+ LRT+IDERGREVNEVVWEGEEQEQKKDDV S KKSDHKAAE TTTNRP 
Subjt:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS

Query:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
         AKKSPALG+   NP  KAGAKK GNATGPKQGNILSFFK++
Subjt:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

XP_038898665.1 uncharacterized protein LOC120086200 [Benincasa hispida]

7.83e-263

75.79

Show/hide

Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MAEIETLGIL D+ESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLKNDP SYHI+LVSGS+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++VDNCLRDN                  RFCGISNSYVKR +D +PA+  APQP+S VDAESTKK T C N   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVA-NP
        PQ QK EMQK SP+VGLQ PTVVKEVK E N T    QASKPT+ K KV+SLPANKKK Q DKTS +TGGSL NLWGRVP KSKLS+++ D NR  A NP
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVA-NP

Query:  TVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKV--NNDE-----QLKVEE
        TVSSAEAQICAHEA+Q  NSDDDDQDVNIKR+ N+SGRKRRVV DFSDDEDF+DAV+LASPE P+ +SCLD KQNTEL+KEKV  NNDE     ++K E+
Subjt:  TVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKV--NNDE-----QLKVEE

Query:  ISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSA
         SE K+SSV EK H+SSAEKNE CAHEND+N+REKP  AAPASP +RK+ LRT+IDERGREVNEVVWEGEEQ+Q+ DDV S K SDHKAAE TTTNRP A
Subjt:  ISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSA

Query:  AKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
        AKKSPALG+S  NP VKAGAKKGGNA GPKQGNILSFFKRV
Subjt:  AKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CK13 DNA polymerase delta subunit 3

1.39e-246

73.8

Show/hide

Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MAEIETLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLK DP SYHIRLVSGS+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++VDNCLRDN                  RFCGISNSYVKR ID +PA+ AA  PKS VD ES+KK T  QN   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVA-NP
        PQ +K EMQK S NVGLQ  TVVKEVK E N T    QASKP + K KV+SLPANKKKAQ DKT  +TGG L NLWGRVP KSKL D++ DVNR  A NP
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVA-NP

Query:  TVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQL------KVE
        +VSSAEAQICAHEA+Q  NSDDDDQDVNIKR+ N+SGRKRRVV DFSDDE+F+DAV+LASPE PK QSCLD KQ+TEL KEK  +NNDEQL      K E
Subjt:  TVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQL------KVE

Query:  EISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS
        + SE +QSSV EK  + S EKNEVCAHEND+ + EKP  A PASP +RK+ LRT+IDERGREVNEVVWEGEEQ+QKKDDV S K SD KA E TTTNRP 
Subjt:  EISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS

Query:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
        AAKKSPALG+   NP VKAGAKK GNA GPKQGNILSFFKRV
Subjt:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

A0A5A7VHS8 Folate gamma-glutamyl hydrolase

1.18e-245

72.25

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Query:  SRGGKLVDISLHLAPLI-PIVVFRSLT-STQMAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDP
        S GGK+VDI L ++  + P     SL  STQMAEIETLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLK DP
Subjt:  SRGGKLVDISLHLAPLI-PIVVFRSLT-STQMAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDP

Query:  QSYHIRLVSGSELTEAKQDFDGTCSIQVYSVQASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCID
         SYHIRLVSGS+L EAKQDFDGTCSIQVYSVQASIPKDPAALWNAEFVQAEELFKQP++VDNCLRDN                  RFCGISNSYVKR ID
Subjt:  QSYHIRLVSGSELTEAKQDFDGTCSIQVYSVQASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCID

Query:  GMPATAAAPQPKSIVDAESTKKNTICQN---PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTG
         +PA+ AA  PKS VD ES+KK T  QN   PQ +K EMQK S NVGLQ  TVVKEVK E N T    QASKP + K KV+SLPANKKKAQ DKT  +TG
Subjt:  GMPATAAAPQPKSIVDAESTKKNTICQN---PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTG

Query:  GSLTNLWGRVPAKSKLSDNYGDVNRVVA-NPTVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSC
        G L NLWGRVP KSKL D++ DVNR  A NP+VSSAEAQICAHEA+Q  NSDDDDQDVNIKR+ N+SGRKRRVV DFSDDE+F+DAV+LASPE PK QSC
Subjt:  GSLTNLWGRVPAKSKLSDNYGDVNRVVA-NPTVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSC

Query:  LDQKQNTELHKEK--VNNDEQL------KVEEISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWE
        LD KQ+TEL KEK  +NNDEQL      K E+ SE +QSSV EK  + S EKNEVCAHEND+ + EKP  A PASP +RK+ LRT+IDERGREVNEVVWE
Subjt:  LDQKQNTELHKEK--VNNDEQL------KVEEISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWE

Query:  GEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
        GEEQ+QKKDDV S K SD KA E TTTNRP AAKKSPALG+   NP VKAGAKK GNA GPKQGNILSFFKRV
Subjt:  GEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

A0A6J1D1P3 DNA polymerase delta subunit 3

0.0

96.42

Show/hide

Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQL
        QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDN                  RFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQL
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQL

Query:  QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPTVSS
        QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPTVSS
Subjt:  QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPTVSS

Query:  AEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQSSVGE
        AEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQSSVGE
Subjt:  AEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQSSVGE

Query:  KHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSA
        KHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRK VLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSA
Subjt:  KHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPALGSSA

Query:  TNPGVKAGAKKGGNATGPKQGNILSFFKRV
        TNPGVKAGAKKGGNATGPKQGNILSFFKRV
Subjt:  TNPGVKAGAKKGGNATGPKQGNILSFFKRV

A0A6J1FMK6 DNA polymerase delta subunit 3

1.02e-256

74.54

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Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MA+IETLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLKNDP SYHIRLVS S+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++V NCLRDN                  RFCGISNSYVKR I  +PA+ AAPQP+S V AESTKKN  CQN   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT
        PQ QK EM K +PNVGLQ P VVKEVKGE+N T SF Q SKP + K KV+SLPANKK+ QSDKTS +T GSL NLWGRVP KSKLSDN+ +V    ANPT
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT

Query:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS
        VSSAEAQICAHE +Q+ NSDDDDQ+VNIKRT N+SGRKRRVV+DFSDDEDF+DAV+LASPE PK QSCLD KQNTELH+E+  +NND+Q    LK+EE  
Subjt:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS

Query:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS
           SKQS   EKH +SS A KNE CAHEN +N REKP  AAPASP +RK+ LRT+IDERGREVNEVVWEGEEQEQKKDDV S KKSDHKAAE TTTNRP 
Subjt:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS

Query:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
         AKKSPALG+S  N   KAGAKK GNATGPKQGNILSFFK++
Subjt:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

A0A6J1IVM7 DNA polymerase delta subunit 3

1.25e-257

74.72

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Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        MA+I+TLGIL DIESLV DKLQVVSYKWLSR+YLISSDTAKRLL+EFVEKHESG +VVYALSGWLKNDP SYHIRLVS S+L EAKQDFDGTCSIQVYSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIPKDPAALWNAEFVQAEELFKQP++VDNCLRDN                  RFCGISNSYVKR ID +PA+ AAPQP+S V AESTKKN  CQN   
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT
        PQ QK EM K SPNVGLQ P VVKEV+GE+N T SF Q SKP + K KV+SLPA KKK QSDKTS +T  SL NLWGRVP KSKLSDN+ +V    ANPT
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT

Query:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS
        VSSAEAQICAHE +Q+ NSDDDDQ+VNIKRT N+ GRKRRVV+DFSDDEDF+DAV+LASPE PK QSCLD KQNTELH+EK  +NND Q    LK+EE  
Subjt:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEK--VNNDEQ----LKVEEIS

Query:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS
           SKQS   +KH +SS A KNEVCAHEN +N REKPT AAPASP +RK+ LRT+IDERGREVNEVVWEGEEQEQKKDDV S KKSDHKAAE TTTNRP 
Subjt:  E--SKQSSVGEKHHHSS-AEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPS

Query:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
         AKKSPALG+   NP  KAGAKK GNATGPKQGNILSFFK++
Subjt:  AAKKSPALGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

SwissProt top hits

e value

%identity

Alignment

Q15054 DNA polymerase delta subunit 3

1.4e-06

21.7

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Query:  LMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVE---KHESG--FEVVYALSGWLKNDPQSYH-IRLVSGSELTEAKQDFDGTCSIQVYSVQAS
        L +I+  VTD+ ++V+YKWLS    +  + AK++L ++VE   K  SG    V Y +SG L  +  S H + +V   +L   K     T SI VYS+Q +
Subjt:  LMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVE---KHESG--FEVVYALSGWLKNDPQSYH-IRLVSGSELTEAKQDFDGTCSIQVYSVQAS

Query:  IPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---PQL
        + KD   L+N ++    ++ K   ++ NC +                   F     + +  +   +   ++    Q    + +E+   N +  N   P  
Subjt:  IPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---PQL

Query:  QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGD-----VNRVVAN
         K   Q+P   +G+       +       T+   + +K  + +V  +S   NK   +        G  ++N +G+  A +K   N          ++V  
Subjt:  QKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGD-----VNRVVAN

Query:  PTVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQ
        PTVS  E ++     ++  +   +     +K    +  R +RV L  SDDE                      K+   + K++     ++K+ E      
Subjt:  PTVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQ

Query:  SSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPP-----------------------KRKIVLRTK--IDERGREVNEVVWEGEEQEQKKDDVGS
                 S + ++EV        E E P+   P SPP                       KRK VL++K  +D  G  V E V+E E     ++++  
Subjt:  SSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPP-----------------------KRKIVLRTK--IDERGREVNEVVWEGEEQEQKKDDVGS

Query:  MKKSDHKAAEATTTNRPSAAKKSPALGSSA
           S H+    T    P   +K P  G++A
Subjt:  MKKSDHKAAEATTTNRPSAAKKSPALGSSA

Q9EQ28 DNA polymerase delta subunit 3

5.7e-08

23.61

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Query:  LMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVE---KHESG--FEVVYALSGWLKNDPQSYH-IRLVSGSELTEAKQDFDGTCSIQVYSVQAS
        L +I+  VTD+ ++V+YKWLS    +  + AK++L E+VE   K  SG    V Y +SG L  +  S H + +V   +L   K     T SI VYS+Q +
Subjt:  LMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVE---KHESG--FEVVYALSGWLKNDPQSYH-IRLVSGSELTEAKQDFDGTCSIQVYSVQAS

Query:  IPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNS--AWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQLQ
        + KD   L+N ++    ++ K   ++ NC + ++      +P  P             + S   R  +     AA+       +A++++  T    P   
Subjt:  IPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNS--AWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQLQ

Query:  KGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRV-----VANP
        K   Q+P   +G+ +     +       T+   + +KP + +V  +S    K   +        G  ++N +G+  A +KL  N      V     V  P
Subjt:  KGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRV-----VANP

Query:  TVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQS
         VS  E ++ A  A +  +   +   V  K     S R +RV  D SD+E           E+ K +    +   ++  +++V  D     E  S S   
Subjt:  TVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQLKVEEISESKQS

Query:  SVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPAL
                   E   V     +T  R            KR +  +T +DE G  V E V+E E     ++++     S HK   A     P   +K P  
Subjt:  SVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPAL

Query:  GSSA
        G++A
Subjt:  GSSA

Arabidopsis top hits

e value

%identity

Alignment

AT1G78650.1 DNA-directed DNA polymerases

1.3e-103

45.2

Show/hide

Query:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV
        M   ETL +L +IES V+D+LQVVSYKWLSRN+ +SS+TAKRLL++FVEKH  G EVVY +SG LKN P  YH RL S +EL E +++F+G  S+ +YSV
Subjt:  MAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGFEVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSV

Query:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---
        QASIP DPAA+WN EFVQAEELF+QP + DNCL+ N                  RFCG+SNS VKR I+G      AP+ +S+     +K ++  Q    
Subjt:  QASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVKRCIDGMPATAAAPQPKSIVDAESTKKNTICQN---

Query:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT
        P  Q    Q  S NVG Q        K E     +  Q++K + DK K   +PANKK  Q +K+   TGG L N+WGRVP K++      DV   + N  
Subjt:  PQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGRVPAKSKLSDNYGDVNRVVANPT

Query:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTE---LHKEKVNNDEQLKVEEISESK
           +E Q  +H+A +   SDD+ +D N  R P D+ RKR+V+ DFSDDE ++D ++LASP  PK  S  D + ++E     K   +   ++K EE   SK
Subjt:  VSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTE---LHKEKVNNDEQLKVEEISESK

Query:  Q----SSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVW-EGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSA
        +    ++  +     S EK +    E + N  ++ T A P+S PKRK VL+++ID+RGREV EVVW E E   +KK+D  + KK D     A   NR  A
Subjt:  Q----SSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVW-EGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSA

Query:  AKKSPALG-SSATNPGVKAGAKKGGNATGPKQGNILSFFKRV
         KKSPA+G ++ATN G KAG+KKGGN   PKQGNI+SFFK+V
Subjt:  AKKSPALG-SSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTACAGAGCGGGTAAAAGAGGAGAGGAATCGAAAAGGTTGGGTTGGAAAATGGCGGGAAAGAGTGAGCTCTCGCTCTCGGGGAGGGAAACTCGTTGATATTTCTCT
TCATCTCGCGCCTCTTATTCCCATCGTCGTCTTCCGATCTCTCACTTCAACGCAAATGGCCGAAATCGAAACCCTAGGCATACTCATGGACATCGAATCCCTCGTAACCG
ACAAGCTTCAAGTGGTTTCCTACAAGTGGCTAAGTCGCAATTATTTGATATCTTCGGATACAGCAAAGAGGTTGCTTCGGGAATTTGTTGAAAAACATGAAAGTGGATTT
GAGGTGGTTTATGCCTTGTCTGGATGGTTGAAGAATGATCCTCAAAGTTACCATATTAGGCTTGTTTCTGGTTCAGAACTTACTGAAGCGAAGCAAGATTTTGATGGCAC
CTGCTCCATTCAAGTTTATAGCGTTCAAGCTTCCATTCCAAAGGATCCAGCCGCACTTTGGAATGCTGAATTTGTTCAGGCAGAAGAGCTCTTCAAGCAGCCCTACAGTG
TTGACAATTGTTTGCGAGACAACAGTGCTTGGCTCCTTATACCGCATTTTCCTCTTTTCCTGATGTTCTGCTTCTTTAGGTTCTGTGGGATTTCCAATTCATATGTCAAG
CGCTGTATTGATGGGATGCCTGCAACCGCTGCAGCTCCTCAGCCAAAAAGTATAGTGGATGCAGAATCAACAAAAAAGAATACAATATGTCAAAATCCACAACTTCAAAA
AGGTGAAATGCAAAAGCCTAGTCCTAATGTTGGTCTACAGGTTCCCACTGTGGTTAAAGAAGTCAAAGGTGAAGATAATGGTACAAAGTCTTTTCAGCAGGCCTCCAAGC
CTACATCAGACAAAGTAAAGGTTTCTTCCTTACCTGCTAATAAGAAGAAAGCTCAAAGTGATAAAACCTCTTTCAACACTGGAGGTTCATTAACAAATTTATGGGGTCGT
GTCCCTGCTAAGTCTAAGCTTAGTGACAACTATGGAGATGTCAATCGTGTCGTCGCAAACCCTACTGTATCTAGTGCAGAGGCACAAATTTGTGCACACGAAGCGGTACA
GAATGTCAACAGTGATGATGATGACCAAGATGTAAATATCAAAAGGACTCCCAATGATAGCGGAAGGAAAAGGAGGGTTGTTCTTGATTTCTCGGATGATGAAGATTTCG
ATGATGCAGTAAATTTGGCATCACCTGAATATCCGAAGGGTCAATCATGTCTAGATCAGAAGCAAAACACAGAATTGCATAAAGAAAAAGTGAACAATGATGAACAACTG
AAGGTGGAAGAAATAAGTGAATCCAAACAATCATCAGTAGGAGAAAAACACCACCATTCCTCTGCAGAGAAAAATGAAGTTTGTGCTCATGAAAATGACACTAATGAGAG
AGAGAAACCAACCGGTGCTGCTCCAGCTTCACCACCTAAGAGGAAAATAGTATTGAGGACAAAAATTGATGAGCGTGGGAGAGAAGTAAATGAGGTGGTTTGGGAGGGTG
AAGAGCAGGAACAGAAGAAGGATGATGTCGGTTCAATGAAGAAATCTGATCATAAAGCAGCTGAGGCTACTACTACAAACAGGCCTTCTGCGGCTAAAAAGTCACCAGCT
TTGGGCAGTAGTGCTACAAATCCAGGAGTTAAAGCAGGAGCGAAAAAGGGTGGAAATGCGACTGGTCCTAAACAGGGAAATATTCTTTCCTTTTTCAAGAGGGTTTGA

mRNA sequence

Show/hide mRNA sequence

GGGACGAGTAATGGTTACAGAGCGGGTAAAAGAGGAGAGGAATCGAAAAGGTTGGGTTGGAAAATGGCGGGAAAGAGTGAGCTCTCGCTCTCGGGGAGGGAAACTCGTTG
ATATTTCTCTTCATCTCGCGCCTCTTATTCCCATCGTCGTCTTCCGATCTCTCACTTCAACGCAAATGGCCGAAATCGAAACCCTAGGCATACTCATGGACATCGAATCC
CTCGTAACCGACAAGCTTCAAGTGGTTTCCTACAAGTGGCTAAGTCGCAATTATTTGATATCTTCGGATACAGCAAAGAGGTTGCTTCGGGAATTTGTTGAAAAACATGA
AAGTGGATTTGAGGTGGTTTATGCCTTGTCTGGATGGTTGAAGAATGATCCTCAAAGTTACCATATTAGGCTTGTTTCTGGTTCAGAACTTACTGAAGCGAAGCAAGATT
TTGATGGCACCTGCTCCATTCAAGTTTATAGCGTTCAAGCTTCCATTCCAAAGGATCCAGCCGCACTTTGGAATGCTGAATTTGTTCAGGCAGAAGAGCTCTTCAAGCAG
CCCTACAGTGTTGACAATTGTTTGCGAGACAACAGTGCTTGGCTCCTTATACCGCATTTTCCTCTTTTCCTGATGTTCTGCTTCTTTAGGTTCTGTGGGATTTCCAATTC
ATATGTCAAGCGCTGTATTGATGGGATGCCTGCAACCGCTGCAGCTCCTCAGCCAAAAAGTATAGTGGATGCAGAATCAACAAAAAAGAATACAATATGTCAAAATCCAC
AACTTCAAAAAGGTGAAATGCAAAAGCCTAGTCCTAATGTTGGTCTACAGGTTCCCACTGTGGTTAAAGAAGTCAAAGGTGAAGATAATGGTACAAAGTCTTTTCAGCAG
GCCTCCAAGCCTACATCAGACAAAGTAAAGGTTTCTTCCTTACCTGCTAATAAGAAGAAAGCTCAAAGTGATAAAACCTCTTTCAACACTGGAGGTTCATTAACAAATTT
ATGGGGTCGTGTCCCTGCTAAGTCTAAGCTTAGTGACAACTATGGAGATGTCAATCGTGTCGTCGCAAACCCTACTGTATCTAGTGCAGAGGCACAAATTTGTGCACACG
AAGCGGTACAGAATGTCAACAGTGATGATGATGACCAAGATGTAAATATCAAAAGGACTCCCAATGATAGCGGAAGGAAAAGGAGGGTTGTTCTTGATTTCTCGGATGAT
GAAGATTTCGATGATGCAGTAAATTTGGCATCACCTGAATATCCGAAGGGTCAATCATGTCTAGATCAGAAGCAAAACACAGAATTGCATAAAGAAAAAGTGAACAATGA
TGAACAACTGAAGGTGGAAGAAATAAGTGAATCCAAACAATCATCAGTAGGAGAAAAACACCACCATTCCTCTGCAGAGAAAAATGAAGTTTGTGCTCATGAAAATGACA
CTAATGAGAGAGAGAAACCAACCGGTGCTGCTCCAGCTTCACCACCTAAGAGGAAAATAGTATTGAGGACAAAAATTGATGAGCGTGGGAGAGAAGTAAATGAGGTGGTT
TGGGAGGGTGAAGAGCAGGAACAGAAGAAGGATGATGTCGGTTCAATGAAGAAATCTGATCATAAAGCAGCTGAGGCTACTACTACAAACAGGCCTTCTGCGGCTAAAAA
GTCACCAGCTTTGGGCAGTAGTGCTACAAATCCAGGAGTTAAAGCAGGAGCGAAAAAGGGTGGAAATGCGACTGGTCCTAAACAGGGAAATATTCTTTCCTTTTTCAAGA
GGGTTTGAGGAACATCGATGGAGCGACTCTGTAAAGGAATAGTAATGTAATATTTATGATCTCTAGCTTTCTTTACTCTCTTTTTGTTCCTTGTTCTATTGATGTGGAAT
TGAATTGAAAGAGCAGATTGTTGATACATATGCAAAGCTAGGAATTGACGTTGGTTCTCCTGAAACTTGGAAGTTGCAGTCAGACATCATTGCATCTTATTTTTATGAAG
AAAATGGTAAGTAGAGGTGGTGCTAACCTTATTTATAGTTCATCTTTAGAGAAGAGAATAGTTGATATTTCCTTATCGATCATGAACTGAACGGTTCAATTTAAATGGTA
ATTTGCATGAGGGTATTTGTTGTGTCATGTGTTTGACTGTACTCGGTTAAACCAGACTTCTCACTTCTCTACCCCTTTTTCCTAAG

Protein sequence

Show/hide protein sequence

MVTERVKEERNRKGWVGKWRERVSSRSRGGKLVDISLHLAPLIPIVVFRSLTSTQMAEIETLGILMDIESLVTDKLQVVSYKWLSRNYLISSDTAKRLLREFVEKHESGF
EVVYALSGWLKNDPQSYHIRLVSGSELTEAKQDFDGTCSIQVYSVQASIPKDPAALWNAEFVQAEELFKQPYSVDNCLRDNSAWLLIPHFPLFLMFCFFRFCGISNSYVK
RCIDGMPATAAAPQPKSIVDAESTKKNTICQNPQLQKGEMQKPSPNVGLQVPTVVKEVKGEDNGTKSFQQASKPTSDKVKVSSLPANKKKAQSDKTSFNTGGSLTNLWGR
VPAKSKLSDNYGDVNRVVANPTVSSAEAQICAHEAVQNVNSDDDDQDVNIKRTPNDSGRKRRVVLDFSDDEDFDDAVNLASPEYPKGQSCLDQKQNTELHKEKVNNDEQL
KVEEISESKQSSVGEKHHHSSAEKNEVCAHENDTNEREKPTGAAPASPPKRKIVLRTKIDERGREVNEVVWEGEEQEQKKDDVGSMKKSDHKAAEATTTNRPSAAKKSPA
LGSSATNPGVKAGAKKGGNATGPKQGNILSFFKRV

MC11g0821 (gene) of Bitter gourd (Dali-11) v1 genome