; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0849 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0849
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationMC11:7224241..7226181
RNA-Seq ExpressionMC11g0849
SyntenyMC11g0849
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146043.1 uncharacterized protein At4g28440 [Cucumis sativus]8.24e-9289.61Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPAS E+QQ+NA  RPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIEL +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

XP_008463705.1 PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo]2.87e-9289.61Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

XP_022139613.1 uncharacterized protein At4g28440-like [Momordica charantia]6.09e-103100Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

XP_023535412.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo]1.42e-8385.71Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MAT KSPTPAS          R GLRKPVFVKVEQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECL+GDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ EP NFVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

XP_038899654.1 uncharacterized protein At4g28440-like [Benincasa hispida]1.73e-9391.56Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPAS E+QQSNA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIEL EP +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L242 Uncharacterized protein3.99e-9289.61Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPAS E+QQ+NA  RPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIEL +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

A0A1S3CKC4 uncharacterized protein At4g28440-like1.39e-9289.61Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

A0A5D3DWE0 Nucleic acid-binding1.39e-9289.61Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

A0A6J1CG19 uncharacterized protein At4g28440-like2.95e-103100Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

A0A6J1FBC1 uncharacterized protein At4g28440-like9.79e-8485.06Show/hide
Query:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT
        MAT KSPTPAS          R GLRKPVFVKVEQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECL+GDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETT

Query:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ EP NFVVKEDNNLSL+EYELVNVAEE
Subjt:  IIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284405.0e-4468.94Show/hide
Query:  RKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAV
        RKPVFVKVEQLKPGT GHTLTVKV+ +N V+   R      S+S+  + +RI ECL+GDETG IL TARNDQVDL+KP  T+I+RN++IDMFKG+MRL V
Subjt:  RKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAV

Query:  DKWGRIELTEPANFVVKEDNNLSLVEYELVNV
        DKWGRIE T  A+F VKEDNNLSLVEYEL+NV
Subjt:  DKWGRIELTEPANFVVKEDNNLSLVEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.5e-4363.97Show/hide
Query:  AEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMR
        AEA   LRKPVF KV +L+PGTNGH+L VKVV +  V+Q+  GR +    RQ RIAECLVGDETG I+ TARNDQVD++K  + + +RNAKIDM+KGSMR
Subjt:  AEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMR

Query:  LAVDKWGRIELT-EPANFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+  EP +  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELT-EPANFVVKEDNNLSLVEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.5e-4363.97Show/hide
Query:  AEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMR
        AEA   LRKPVF KV +L+PGTNGH+L VKVV +  V+Q+  GR +    RQ RIAECLVGDETG I+ TARNDQVD++K  + + +RNAKIDM+KGSMR
Subjt:  AEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMR

Query:  LAVDKWGRIELT-EPANFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+  EP +  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELT-EPANFVVKEDNNLSLVEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein7.6e-4866.67Show/hide
Query:  RPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAVDK
        + GL+KP F KV+QL+PGT+GH + VK+V++  VLQKGR+     RQ RI+EC+VGDETG I+ TARNDQVDL+K  +T+ +RNAKIDM+KGSMRLAVDK
Subjt:  RPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAVDK

Query:  WGRIELTEPANFVVKEDNNLSLVEYELVNVAE
        WGR+E+TEPA+F VKED N+SL+EYELVNV E
Subjt:  WGRIELTEPANFVVKEDNNLSLVEYELVNVAE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein4.8e-5067.31Show/hide
Query:  GKSPTPASPEVQQSNAE----ARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPE
        G++P P S   + S  +         +KPVFVKV+QLKPGT+GHTLTVKVV  N+V QK G + S HLR  RI+ECLVGDET  IL TARNDQV+L+KP 
Subjt:  GKSPTPASPEVQQSNAE----ARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPE

Query:  TTIIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE
         T+ +RNAKIDMFKGSMRLAVDKWGRIE TEPA+  VKEDNNLSLVEYELVNV EE
Subjt:  TTIIIRNAKIDMFKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE

AT4G28440.1 Nucleic acid-binding, OB-fold-like protein3.5e-4568.94Show/hide
Query:  RKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAV
        RKPVFVKVEQLKPGT GHTLTVKV+ +N V+   R      S+S+  + +RI ECL+GDETG IL TARNDQVDL+KP  T+I+RN++IDMFKG+MRL V
Subjt:  RKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAV

Query:  DKWGRIELTEPANFVVKEDNNLSLVEYELVNV
        DKWGRIE T  A+F VKEDNNLSLVEYEL+NV
Subjt:  DKWGRIELTEPANFVVKEDNNLSLVEYELVNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGGGAAATCACCTACGCCGGCATCGCCGGAGGTGCAGCAGAGCAATGCGGAGGCGCGGCCAGGCCTGAGGAAGCCAGTCTTCGTGAAGGTCGAGCAGCTCAA
ACCTGGCACAAATGGTCATACACTCACCGTCAAGGTTGTTACCTCCAATACCGTGTTGCAGAAGGGTCGATCGGTGTCCCAGCACCTCCGCCAGACTCGGATCGCTGAGT
GCCTTGTTGGGGACGAAACTGGAACCATTTTGCTCACTGCGCGTAATGACCAAGTTGATCTAGTAAAGCCCGAGACAACTATCATTATCCGGAACGCGAAGATTGACATG
TTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGAATCGAGCTCACTGAGCCTGCAAACTTCGTCGTCAAGGAAGACAACAATCTATCTTTAGTCGAGTATGA
ACTTGTGAATGTTGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACGTAACCAAAACGAAAGCTTAAATTATATAAGACAAAAATAGATAAGTAAATGGATTAAAATAAATAAAAAAAGAAAAACAAGACCAAAATAATATTTAAAACT
TAATTGATGATTTGACGTGAAGTAGGAAAATTGAGCATTGGTTGCTAAGAATAAATACCCAAAATTGGTTCAAAATTAATTTGGGTTTCGAAAATGTCAGCAAAAACCAA
AGAGGAAGCAAAATGAAGGAGGTATATAAACAGCCCAGCAGGAATCCCAAAGGGTTGGAGAGAGACGGGGAGAGAAGAGGAGAAGAGGAGAAGACAGATATTATCGATTA
ACGCGAATTGGGAATTAGGGTTTGGTGTGGGTGCTGGTGATCTTCCGCTTCGGGAACCATGGCGACGGGGAAATCACCTACGCCGGCATCGCCGGAGGTGCAGCAGAGCA
ATGCGGAGGCGCGGCCAGGCCTGAGGAAGCCAGTCTTCGTGAAGGTCGAGCAGCTCAAACCTGGCACAAATGGTCATACACTCACCGTCAAGGTTGTTACCTCCAATACC
GTGTTGCAGAAGGGTCGATCGGTGTCCCAGCACCTCCGCCAGACTCGGATCGCTGAGTGCCTTGTTGGGGACGAAACTGGAACCATTTTGCTCACTGCGCGTAATGACCA
AGTTGATCTAGTAAAGCCCGAGACAACTATCATTATCCGGAACGCGAAGATTGACATGTTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGAATCGAGCTCA
CTGAGCCTGCAAACTTCGTCGTCAAGGAAGACAACAATCTATCTTTAGTCGAGTATGAACTTGTGAATGTTGCAGAGGAATGATAAGGGCCTATTAAAGGCCAACTTAAG
CATACAATAGGTTGAGATGACTGGTCATCGAATTTCCTGGTAATCTGCTGATGTGAATATATAACAACACTACATTATAATTTTGTGTGGGTGAAGTATTTAAACTAAAG
AATCCGTTTCATTTTGTCTAAACTTGTCGGTATGACTTATGTGAAGCCATGTTTTGTCGGGTATAGGTATGAATAGGTAGTAGTTTGGTTCTTCTTATGACTCTGGAAAT
GTAATCGGGCATCAATGATGACGAAAAATGCTTTTGG
Protein sequenceShow/hide protein sequence
MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDM
FKGSMRLAVDKWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE