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MC11g0881 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0881
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-H2 finger protein ATL60-like
Genome locationMC11:7482949..7483503
RNA-Seq ExpressionMC11g0881
SyntenyMC11g0881
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]2.98e-7564.17Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G GD +                          V
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        E  +A  EERR++R E+LP  P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+CRNC++A
Subjt:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]8.14e-7664.17Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G GD +                          V
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        E  +A  EERR++R E+LP  P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+CRNC++A
Subjt:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

XP_022139402.1 RING-H2 finger protein ATL60-like [Momordica charantia]7.90e-130100Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        ERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
Subjt:  ERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

XP_022976597.1 RING-H2 finger protein ATL39-like [Cucurbita maxima]7.62e-7365.05Show/hide
Query:  MADPLLTLLFPMETLVPESPSPP-IVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERA
        MADPLLTLLFPMET+V ES SPP IVHYT+TLDL TSI+FS T+ILFFLFL+HVL+GFLQWFL  R GG  DVE G                        
Subjt:  MADPLLTLLFPMETLVPESPSPP-IVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERA

Query:  VERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
                EERRVRR E++P  VRFGSE+M RR   EECAICLEEF+AGE CQALPECNHFFHSDCIDVWF KKFTCP+CR+CI+A
Subjt:  VERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]7.00e-7764.55Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAG--DVELGEAGSSFFQAVAQNNAWVVGAVER
        M DPLLTLLFPMET+VPESPSPP++HYT+TLD+ TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G G  DVE                         
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAG--DVELGEAGSSFFQAVAQNNAWVVGAVER

Query:  AVERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
              A  EERR++R E+LP  P VRFGSEKM RR   EECAICLEEFL GE CQALPECNHFFHS+CIDVWF KKFTCP+CRNC++A
Subjt:  AVERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein3.39e-7764.55Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAG--DVELGEAGSSFFQAVAQNNAWVVGAVER
        M DPLLTLLFPMET+VPESPSPP++HYT+TLD+ TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G G  DVE                         
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAG--DVELGEAGSSFFQAVAQNNAWVVGAVER

Query:  AVERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
              A  EERR++R E+LP  P VRFGSEKM RR   EECAICLEEFL GE CQALPECNHFFHS+CIDVWF KKFTCP+CRNC++A
Subjt:  AVERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

A0A1S3BVC7 RING-H2 finger protein ATL39-like3.94e-7664.17Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G GD +                          V
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        E  +A  EERR++R E+LP  P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+CRNC++A
Subjt:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

A0A5A7VAT0 RING-H2 finger protein ATL39-like1.44e-7564.17Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G GD +                          V
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        E  +A  EERR++R E+LP  P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+CRNC++A
Subjt:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

A0A5D3D9M0 RING-H2 finger protein ATL39-like3.94e-7664.17Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        M DPLLTLLFPMET+VPES SPP++HYT+TLDL TSI+FSF++ILFFLFLFHVL+GFLQWFLDVR  G GD +                          V
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        E  +A  EERR++R E+LP  P V+FGSEKM RR   EECAICLEEFLAGE CQALPEC+HFFHS+CI+VWF KKFTCP+CRNC++A
Subjt:  ERVVAKLEERRVRRPERLP--PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

A0A6J1CDV3 RING-H2 finger protein ATL60-like3.83e-130100Show/hide
Query:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
        MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV
Subjt:  MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAV

Query:  ERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
        ERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA
Subjt:  ERVVAKLEERRVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL105.5e-1349.25Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        R+ PVV + S +M     +EEC ICL +F++GE  + LP+CNH FH  CID W ++  TCP CRNC+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

Q6NML0 E3 ubiquitin-protein ligase ATL763.5e-1247.76Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        R+ PVV + S +M      EEC ICL +F++GE  + LP+CNH FH  CID W +   TCP CR+C+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

Q94BY6 RING-H2 finger protein ATL751.0e-1146.27Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        R+ PVV + S +M      EEC ICL +F++GE  + LP+C+H FH  CID W ++  TCP CR+C+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

Q9LS99 RING-H2 finger protein ATL774.6e-1246.27Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        ++ PVV + S ++      EEC ICL +F+AGE  + LP+CNH FH  CID W  +  TCP CR+C+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

Q9XF63 RING-H2 finger protein ATL37.9e-1243.75Show/hide
Query:  PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        P+V F  +  +   +  EC+ICL E + G+  + LP+CNH FH +CID+WF+   TCP+CRN +
Subjt:  PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein7.3e-1346.27Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        R+ PVV + S +M      EEC ICL +F++GE  + LP+C+H FH  CID W ++  TCP CR+C+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

AT1G49210.1 RING/U-box superfamily protein2.5e-1347.76Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        R+ PVV + S +M      EEC ICL +F++GE  + LP+CNH FH  CID W +   TCP CR+C+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

AT1G49220.1 RING/U-box superfamily protein3.9e-1449.25Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        R+ PVV + S +M     +EEC ICL +F++GE  + LP+CNH FH  CID W ++  TCP CRNC+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

AT1G72310.1 RING/U-box superfamily protein5.6e-1343.75Show/hide
Query:  PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        P+V F  +  +   +  EC+ICL E + G+  + LP+CNH FH +CID+WF+   TCP+CRN +
Subjt:  PVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI

AT3G18773.1 RING/U-box superfamily protein3.3e-1346.27Show/hide
Query:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI
        ++ PVV + S ++      EEC ICL +F+AGE  + LP+CNH FH  CID W  +  TCP CR+C+
Subjt:  RLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCATTACTCACTCTCCTCTTCCCAATGGAAACCTTAGTTCCCGAATCGCCGTCTCCCCCAATCGTCCACTACACCATAACCCTCGACCTCCCGACCTCCAT
ACTCTTCTCCTTCACCGTGATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAACGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCACGGCGGCGCCGGGGACGTGGAGC
TCGGGGAGGCCGGGTCTTCGTTCTTCCAGGCGGTGGCGCAGAACAACGCGTGGGTTGTGGGGGCGGTTGAGCGGGCGGTGGAGCGGGTGGTGGCGAAGCTGGAGGAGCGG
CGGGTGCGGCGGCCAGAGAGACTGCCGCCGGTGGTGAGATTCGGGAGCGAGAAGATGAGGAGGAGGAGCGAGAATGAGGAGTGCGCCATTTGTTTGGAGGAGTTTCTGGC
CGGAGAAATTTGCCAGGCCTTGCCGGAATGCAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTCAGGAAGAAATTCACCTGCCCCGTTTGTCGTAATTGTATTT
CAGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCCATTACTCACTCTCCTCTTCCCAATGGAAACCTTAGTTCCCGAATCGCCGTCTCCCCCAATCGTCCACTACACCATAACCCTCGACCTCCCGACCTCCAT
ACTCTTCTCCTTCACCGTGATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAACGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCACGGCGGCGCCGGGGACGTGGAGC
TCGGGGAGGCCGGGTCTTCGTTCTTCCAGGCGGTGGCGCAGAACAACGCGTGGGTTGTGGGGGCGGTTGAGCGGGCGGTGGAGCGGGTGGTGGCGAAGCTGGAGGAGCGG
CGGGTGCGGCGGCCAGAGAGACTGCCGCCGGTGGTGAGATTCGGGAGCGAGAAGATGAGGAGGAGGAGCGAGAATGAGGAGTGCGCCATTTGTTTGGAGGAGTTTCTGGC
CGGAGAAATTTGCCAGGCCTTGCCGGAATGCAACCATTTTTTTCATTCCGATTGTATTGATGTTTGGTTCAGGAAGAAATTCACCTGCCCCGTTTGTCGTAATTGTATTT
CAGCT
Protein sequenceShow/hide protein sequence
MADPLLTLLFPMETLVPESPSPPIVHYTITLDLPTSILFSFTVILFFLFLFHVLNGFLQWFLDVRHGGAGDVELGEAGSSFFQAVAQNNAWVVGAVERAVERVVAKLEER
RVRRPERLPPVVRFGSEKMRRRSENEECAICLEEFLAGEICQALPECNHFFHSDCIDVWFRKKFTCPVCRNCISA