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MC11g0906 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0906
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationMC11:7690109..7690324
RNA-Seq ExpressionMC11g0906
SyntenyMC11g0906
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW92839.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.80e-0433.33Show/hide
Query:  MLATDFKG-----QAKILWLSTVVALLWRVWHERN-------TRSGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS
        ML+T+F G     +  +LW +  +ALLW VW ERN       TR+    W ++   A  W S SK F    +  I  +W++
Subjt:  MLATDFKG-----QAKILWLSTVVALLWRVWHERN-------TRSGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS

RVX17758.1 putative ribonuclease H protein [Vitis vinifera]3.69e-0432.5Show/hide
Query:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWV
        ML   FKG     + K LW    + L+W VWHERN R     G T    W +++ ++  W S +K F    ++ +  NW+
Subjt:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWV

RWR92932.1 hypothetical protein CKAN_02215900 [Cinnamomum micranthum f. kanehirae]3.82e-0438.03Show/hide
Query:  FKGQAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS
        F G  +ILW  T+ A+LW +W ERN R    S ST   F + + +    W    K F NF +  I  NW S
Subjt:  FKGQAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS

TQD89699.1 hypothetical protein C1H46_024693 [Malus baccata]1.37e-0434.21Show/hide
Query:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR--------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQI
        +L+T+FK      ++K+LW   V+A+ W +W ERN R             W  VK +A  W S +K F N  ++QI
Subjt:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR--------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQI

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]2.62e-0431.43Show/hide
Query:  QAKILWLSTVVALLWRVWHERNTR-------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVSFL
        + + LW + V A+LW +W E N R            W V++     W S SK FCN+ +  I  +W +F+
Subjt:  QAKILWLSTVVALLWRVWHERNTR-------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVSFL

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909761.27e-0431.43Show/hide
Query:  QAKILWLSTVVALLWRVWHERNTR-------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVSFL
        + + LW + V A+LW +W E N R            W V++     W S SK FCN+ +  I  +W +F+
Subjt:  QAKILWLSTVVALLWRVWHERNTR-------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVSFL

A0A3S3R1F6 Uncharacterized protein1.85e-0438.03Show/hide
Query:  FKGQAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS
        F G  +ILW  T+ A+LW +W ERN R    S ST   F + + +    W    K F NF +  I  NW S
Subjt:  FKGQAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS

A0A438I862 LINE-1 retrotransposable element ORF2 protein1.35e-0433.33Show/hide
Query:  MLATDFKG-----QAKILWLSTVVALLWRVWHERN-------TRSGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS
        ML+T+F G     +  +LW +  +ALLW VW ERN       TR+    W ++   A  W S SK F    +  I  +W++
Subjt:  MLATDFKG-----QAKILWLSTVVALLWRVWHERN-------TRSGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVS

A0A438K969 Putative ribonuclease H protein1.79e-0432.5Show/hide
Query:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWV
        ML   FKG     + K LW    + L+W VWHERN R     G T    W +++ ++  W S +K F    ++ +  NW+
Subjt:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR----SGST---FWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWV

A0A540LTR6 zf-RVT domain-containing protein6.63e-0534.21Show/hide
Query:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR--------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQI
        +L+T+FK      ++K+LW   V+A+ W +W ERN R             W  VK +A  W S +K F N  ++QI
Subjt:  MLATDFKG-----QAKILWLSTVVALLWRVWHERNTR--------SGSTFWAVVKIFAFSWCSTSKPFCNFGVTQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTAATGTTGGCTACTGATTTCAAGGGTCAGGCTAAAATCCTCTGGTTGAGCACAGTGGTGGCTTTGTTATGGAGAGTGTGGCATGAAAGAAACACTAGAAGTGGGAGCAC
CTTTTGGGCTGTTGTTAAAATATTTGCCTTTTCTTGGTGTTCTACTTCGAAACCTTTTTGTAATTTTGGAGTGACTCAAATCTTCACCAATTGGGTTTCCTTTTTG
mRNA sequenceShow/hide mRNA sequence
CTAATGTTGGCTACTGATTTCAAGGGTCAGGCTAAAATCCTCTGGTTGAGCACAGTGGTGGCTTTGTTATGGAGAGTGTGGCATGAAAGAAACACTAGAAGTGGGAGCAC
CTTTTGGGCTGTTGTTAAAATATTTGCCTTTTCTTGGTGTTCTACTTCGAAACCTTTTTGTAATTTTGGAGTGACTCAAATCTTCACCAATTGGGTTTCCTTTTTG
Protein sequenceShow/hide protein sequence
LMLATDFKGQAKILWLSTVVALLWRVWHERNTRSGSTFWAVVKIFAFSWCSTSKPFCNFGVTQIFTNWVSFL