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MC11g0937 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0937
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L2
Genome locationMC11:7969439..7969627
RNA-Seq ExpressionMC11g0937
SyntenyMC11g0937
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0008236 - serine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78243.1 hypothetical protein VITISV_030602 [Vitis vinifera]4.45e-1760.32Show/hide
Query:  HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        HT+VTHMVL++ ++ T  DGS  ++I +N+IGLL  +DEL GVH LGGDE+L L+LV EGVAE
Subjt:  HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

GER39561.1 60S ribosomal protein L2 [Striga asiatica]2.86e-1562.3Show/hide
Query:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        SVTH++LH+ ++ T RD S+ E I D+KIGLL AVDELAG+H LGG E+LLL+L  E VAE
Subjt:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

KAF4382597.1 hypothetical protein F8388_015425 [Cannabis sativa]2.05e-1359.68Show/hide
Query:  TSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        T+VT +VL + N+ TFR+ S+ ++IT N+IGLL  VDEL  V TLGGDE+LLLVLV E V E
Subjt:  TSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

RVW26796.1 hypothetical protein CK203_099716 [Vitis vinifera]1.11e-1360.66Show/hide
Query:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        +VTHMVL++ ++ T  DGS  ++I +N+IGLL  VDELAGVH LGGDE+L L+LV E VAE
Subjt:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

XP_034701010.1 uncharacterized protein LOC117926028 [Vitis riparia]9.08e-1658.73Show/hide
Query:  HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        HT+VTHMVL++ ++    DGS  ++I +N+IGLL  VDELAGVH LG D++L L+LV EGVAE
Subjt:  HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

TrEMBL top hitse value%identityAlignment
A0A438CUB9 Chromo domain-containing protein5.37e-1460.66Show/hide
Query:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        +VTHMVL++ ++ T  DGS  ++I +N+IGLL  VDELAGVH LGGDE+L L+LV E VAE
Subjt:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

A0A5A7Q6A2 60S ribosomal protein L21.38e-1562.3Show/hide
Query:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        SVTH++LH+ ++ T RD S+ E I D+KIGLL AVDELAG+H LGG E+LLL+L  E VAE
Subjt:  SVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

A0A7J6GI91 Uncharacterized protein9.93e-1459.68Show/hide
Query:  TSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        T+VT +VL + N+ TFR+ S+ ++IT N+IGLL  VDEL  V TLGGDE+LLLVLV E V E
Subjt:  TSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

A0A7J6HGG0 Uncharacterized protein9.93e-1459.68Show/hide
Query:  TSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        T+VT +VL + N+ TFR+ S+ ++IT N+IGLL  VDEL  V TLGGDE+LLLVLV E V E
Subjt:  TSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

A5AS87 Uncharacterized protein2.15e-1760.32Show/hide
Query:  HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE
        HT+VTHMVL++ ++ T  DGS  ++I +N+IGLL  +DEL GVH LGGDE+L L+LV EGVAE
Subjt:  HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACACCTCGGTCACCCACATGGTGCTCCACATTACAAACCACAGCACCTTCAGGGATGGCTCTGATGGGGAGCACATTACCGACAACAAGATTGGCCTTCTTCCCGCAGT
AGACGAACTGGCCGGTGTACATACCCTCGGCGGCGATGAAGAGCTCCTTCTGGTGCTTGTAGCGGAAGGGGTGGCGGAA
mRNA sequenceShow/hide mRNA sequence
CACACCTCGGTCACCCACATGGTGCTCCACATTACAAACCACAGCACCTTCAGGGATGGCTCTGATGGGGAGCACATTACCGACAACAAGATTGGCCTTCTTCCCGCAGT
AGACGAACTGGCCGGTGTACATACCCTCGGCGGCGATGAAGAGCTCCTTCTGGTGCTTGTAGCGGAAGGGGTGGCGGAA
Protein sequenceShow/hide protein sequence
HTSVTHMVLHITNHSTFRDGSDGEHITDNKIGLLPAVDELAGVHTLGGDEELLLVLVAEGVAE