; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g0938 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g0938
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionorganelle RRM domain-containing protein 2, mitochondrial
Genome locationMC11:7973001..7973831
RNA-Seq ExpressionMC11g0938
SyntenyMC11g0938
Gene Ontology termsGO:0080156 - mitochondrial mRNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151968.1 organelle RRM domain-containing protein 2, mitochondrial [Cucumis sativus]2.44e-7483.92Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAA+APRSLR+L++RTST T   IS +I DWEKPEPS  +F+S RLFS ASTSSFIPPPLPPSAQQRE  EPSTNLFVSGLSKRTTTEKLHE FA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEV HARVVTDRVTGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

XP_008454580.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Cucumis melo]2.25e-7281.82Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAA+APRSLR+L++ TST T   IS +I DWEKP PS NSF+  RLFS ASTSSF+PPPLPPSAQQRE  EPSTNLFVSGLSKRTTTEKLHE F+
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEVVHARVVTDR TGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

XP_022139714.1 organelle RRM domain-containing protein 2, mitochondrial [Momordica charantia]4.13e-93100Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

XP_022976594.1 organelle RRM domain-containing protein 2, mitochondrial-like [Cucurbita maxima]1.08e-7283.22Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAAAAPRSLRRL++ TS  T      +I D EKP P+ N+FVS RLFS ASTSSFIPPPLPPSA QRE+PEPSTNLFVSGLSKRTTTEKLHETFA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEVVHARVVTDRVTGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

XP_038896843.1 organelle RRM domain-containing protein 2, mitochondrial [Benincasa hispida]2.39e-7686.01Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAAAAPRSLRRL++ TST T   IS +I DWEK EPS N+F+S RLFS ASTSSFIPPPLPPSAQQRE+PEPSTNLFVSGLSKRTTTEKLHE FA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEVVHARVVTDRVTGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

TrEMBL top hitse value%identityAlignment
A0A0A0LD10 RRM domain-containing protein1.18e-7483.92Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAA+APRSLR+L++RTST T   IS +I DWEKPEPS  +F+S RLFS ASTSSFIPPPLPPSAQQRE  EPSTNLFVSGLSKRTTTEKLHE FA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEV HARVVTDRVTGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

A0A1S3C066 glycine-rich RNA-binding protein 4, mitochondrial1.09e-7281.82Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAA+APRSLR+L++ TST T   IS +I DWEKP PS NSF+  RLFS ASTSSF+PPPLPPSAQQRE  EPSTNLFVSGLSKRTTTEKLHE F+
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEVVHARVVTDR TGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

A0A6J1CDT1 organelle RRM domain-containing protein 2, mitochondrial2.00e-93100Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

A0A6J1FQV3 organelle RRM domain-containing protein 2, mitochondrial-like3.23e-7283.22Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAA APRSLRRL++ TS+ T   IS +I DWEK E S N+FVS RLFS  S SSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKL+E FA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEVVHARVVTDRVTGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

A0A6J1INZ4 organelle RRM domain-containing protein 2, mitochondrial-like5.23e-7383.22Show/hide
Query:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA
        MALRSAAAAAPRSLRRL++ TS  T      +I D EKP P+ N+FVS RLFS ASTSSFIPPPLPPSA QRE+PEPSTNLFVSGLSKRTTTEKLHETFA
Subjt:  MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFA

Query:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        +FGEVVHARVVTDRVTGYSKGFGFVKYA LEDAAKGIEGMDGK
Subjt:  QFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

SwissProt top hitse value%identityAlignment
Q99070 Glycine-rich RNA-binding protein 21.7e-0946.77Show/hide
Query:  FVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        FV GL+  T  E L + FA FG+V+ ++V+TDR TG S+GFGFV +++ +     IE M+GK
Subjt:  FVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

Q9FIU6 Organelle RRM domain-containing protein 2, mitochondrial1.5e-2668.42Show/hide
Query:  RLF-SGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        RLF S AS  SF+ P        R + EPSTNLFVSGLSKRTT+E L   FAQFGEV  A+VVTDRV+GYSKGFGFV+YA LED+AKGI GMDGK
Subjt:  RLF-SGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

Q9FX45 Organelle RRM domain-containing protein 6, chloroplastic1.2e-1244.21Show/hide
Query:  VRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        V + S  ST S   PP   S        P T L+VSGLS RTT + L +TF QFG ++H  +V D+V    KGF F++Y   E+A K I+GM GK
Subjt:  VRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

Q9LU44 Splicing factor-like protein 19.7e-1042.5Show/hide
Query:  PPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDG
        P  PPS +  E     TNL++  L      + L   F+ FGE+V A+V+ DRVTG SKG+GFVKYA+++ A   ++ M+G
Subjt:  PPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDG

Q9SVM8 Glycine-rich RNA-binding protein 2, mitochondrial9.7e-1050Show/hide
Query:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        ST LF+ GLS  T    L + FA FG+VV A+V+ DR TG S+GFGFV + +   A   I  MDGK
Subjt:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

Arabidopsis top hitse value%identityAlignment
AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.7e-1444.21Show/hide
Query:  VRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        V + S  ST S   PP   S        P T L+VSGLS RTT + L +TF QFG ++H  +V D+V    KGF F++Y   E+A K I+GM GK
Subjt:  VRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

AT2G37510.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-1560.61Show/hide
Query:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        S  LFVSGLS+ TT EKL + FA FG++V ARV+TDR +G SKGFGFV YA +EDA K    M+ K
Subjt:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

AT4G13850.1 glycine-rich RNA-binding protein 26.9e-1150Show/hide
Query:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        ST LF+ GLS  T    L + FA FG+VV A+V+ DR TG S+GFGFV + +   A   I  MDGK
Subjt:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

AT4G13850.2 glycine-rich RNA-binding protein 26.9e-1150Show/hide
Query:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        ST LF+ GLS  T    L + FA FG+VV A+V+ DR TG S+GFGFV + +   A   I  MDGK
Subjt:  STNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK

AT5G54580.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-2768.42Show/hide
Query:  RLF-SGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK
        RLF S AS  SF+ P        R + EPSTNLFVSGLSKRTT+E L   FAQFGEV  A+VVTDRV+GYSKGFGFV+YA LED+AKGI GMDGK
Subjt:  RLF-SGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARVVTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCAGATCGGCGGCGGCGGCGGCTCCTCGGAGTTTGAGGCGGCTTCTTTCTCGTACTTCAACTTTTACTCCATCGACGATCTCGCACTCTATTCGGGATTGGGA
GAAACCGGAGCCGAGCGCGAATTCCTTCGTTTCTGTCCGGCTGTTCTCCGGCGCTTCAACCTCCAGTTTCATTCCTCCGCCGCTCCCTCCGTCCGCTCAGCAGCGTGAGA
AGCCTGAGCCTAGTACTAACCTTTTCGTTTCCGGCCTCAGTAAACGCACTACTACCGAAAAGCTTCATGAAACCTTCGCACAGTTTGGTGAAGTTGTTCATGCTAGAGTT
GTGACTGATCGAGTGACAGGATATTCTAAAGGATTTGGCTTTGTTAAATATGCCAATTTGGAAGATGCGGCTAAAGGCATAGAGGGTATGGATGGAAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCAGATCGGCGGCGGCGGCGGCTCCTCGGAGTTTGAGGCGGCTTCTTTCTCGTACTTCAACTTTTACTCCATCGACGATCTCGCACTCTATTCGGGATTGGGA
GAAACCGGAGCCGAGCGCGAATTCCTTCGTTTCTGTCCGGCTGTTCTCCGGCGCTTCAACCTCCAGTTTCATTCCTCCGCCGCTCCCTCCGTCCGCTCAGCAGCGTGAGA
AGCCTGAGCCTAGTACTAACCTTTTCGTTTCCGGCCTCAGTAAACGCACTACTACCGAAAAGCTTCATGAAACCTTCGCACAGTTTGGTGAAGTTGTTCATGCTAGAGTT
GTGACTGATCGAGTGACAGGATATTCTAAAGGATTTGGCTTTGTTAAATATGCCAATTTGGAAGATGCGGCTAAAGGCATAGAGGGTATGGATGGAAAG
Protein sequenceShow/hide protein sequence
MALRSAAAAAPRSLRRLLSRTSTFTPSTISHSIRDWEKPEPSANSFVSVRLFSGASTSSFIPPPLPPSAQQREKPEPSTNLFVSGLSKRTTTEKLHETFAQFGEVVHARV
VTDRVTGYSKGFGFVKYANLEDAAKGIEGMDGK