; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g1046 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1046
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationMC11:8979231..8979917
RNA-Seq ExpressionMC11g1046
SyntenyMC11g1046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607751.1 hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sororia]1.33e-6259.39Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLL--LLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN
        SRLN+ + ST LASI FL+LRFSPSFL+LL  LLIPS  FL  K    S+S++ S  NP LI                  S  G L    FD      + 
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLL--LLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN

Query:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV
           +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDELARNLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV+
Subjt:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV

Query:  RQRGFVELLEEIDEEENLIEIDISRGLNR
        +Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  RQRGFVELLEEIDEEENLIEIDISRGLNR

XP_022941469.1 uncharacterized protein LOC111446758 [Cucurbita moschata]1.01e-6158.95Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLL--LLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN
        SRLN+ + ST LASI FL+LRFSPSFL+LL  LLIPS  FL  K    S+S++ S  NP LI                  S  G L    FD      + 
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLL--LLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN

Query:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV
           +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDEL RNLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV+
Subjt:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV

Query:  RQRGFVELLEEIDEEENLIEIDISRGLNR
        +Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  RQRGFVELLEEIDEEENLIEIDISRGLNR

XP_022981598.1 uncharacterized protein LOC111480668 [Cucurbita maxima]3.76e-6359.65Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL-IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALNP
        SRLN+ + ST LASI FL+LRFSPSFL+LLLL IPS  FL  K    S+S++ S  NP LI                  S  G L    FD      +  
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL-IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALNP

Query:  PLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVR
          +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDELARNLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV++
Subjt:  PLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVR

Query:  QRGFVELLEEIDEEENLIEIDISRGLNR
        Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  QRGFVELLEEIDEEENLIEIDISRGLNR

XP_023524758.1 uncharacterized protein LOC111788599 isoform X1 [Cucurbita pepo subsp. pepo]4.85e-6259.39Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL--IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN
        SRLN+ + ST LASI FL+LRFSPSFLTLLLL  IPS  FL  K    S+S++ S  NP LI                  S  G L    FD      + 
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL--IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN

Query:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV
           +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDELA NLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV+
Subjt:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV

Query:  RQRGFVELLEEIDEEENLIEIDISRGLNR
        +Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  RQRGFVELLEEIDEEENLIEIDISRGLNR

XP_023524760.1 uncharacterized protein LOC111788599 isoform X2 [Cucurbita pepo subsp. pepo]3.56e-6259.39Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL--IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN
        SRLN+ + ST LASI FL+LRFSPSFLTLLLL  IPS  FL  K    S+S++ S  NP LI                  S  G L    FD      + 
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL--IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN

Query:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV
           +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDELA NLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV+
Subjt:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV

Query:  RQRGFVELLEEIDEEENLIEIDISRGLNR
        +Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  RQRGFVELLEEIDEEENLIEIDISRGLNR

TrEMBL top hitse value%identityAlignment
A0A0A0K6W9 Uncharacterized protein2.13e-5251.48Show/hide
Query:  SSSRLNLALASTFLASIFFLTLRFSPSFLTLLLL--IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSA
        + SR NL + ST LASIFFLTLRFSPSF TLLLL  IP+ LF+  K  +            PL   L                         FD N  + 
Subjt:  SSSRLNLALASTFLASIFFLTLRFSPSFLTLLLL--IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSA

Query:  LNPPLIGVLRPSEELSSDGD---ESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSS---EDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLP
          P      +  + +SSD +    SSSN GG GSGDF SDLWM LDEL RNLP +ED SS   +DDDSLIEI LLPNSN           G+RNLETCLP
Subjt:  LNPPLIGVLRPSEELSSDGD---ESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSS---EDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLP

Query:  DLLPDSVVRQRGFVELLEEIDEEENLIEIDISRGLNR
        +LLPDSV+RQ GFVELLEEI+EE+NLIEIDIS+G NR
Subjt:  DLLPDSVVRQRGFVELLEEIDEEENLIEIDISRGLNR

A0A2I4E0W2 uncharacterized protein LOC1089852593.20e-1043.2Show/hide
Query:  VLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAE-DLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVRQRG
        V  PS+ L S   ESS++      G FD DL +  + + ++   ++  +S EDDDSLIEI+L P S   ++  + G      L++ LP LLPDSV  Q+G
Subjt:  VLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAE-DLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVRQRG

Query:  FVELLEEIDE---EENLIEIDISRG
         +ELL EI+E   EENLIEID+S G
Subjt:  FVELLEEIDE---EENLIEIDISRG

A0A5D3C7W2 Uncharacterized protein9.68e-5252.32Show/hide
Query:  SSSRLNLALASTFLASIFFL-TLRFSPSFLTLLLL--IPSTLFLT-KKSKS-DSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNR
        + SR NL + ST LASIFFL TLRFSPSF TLLLL  +P+TLFL  +KS S D +      H  P+        E SS+ DE+S S+             
Subjt:  SSSRLNLALASTFLASIFFL-TLRFSPSFLTLLLL--IPSTLFLT-KKSKS-DSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNR

Query:  SSALNPPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSS---EDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLP
                                +SSN GG GSGDF SDLWM LDEL RNLP +ED SS   +DDDSLIEI LLPNSN           G+RNLETCLP
Subjt:  SSALNPPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSS---EDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLP

Query:  DLLPDSVVRQRGFVELLEEIDEEENLIEIDISRGLNR
        +LLPDSV+RQ GFVELLEEI+EE+NLIEIDIS+G NR
Subjt:  DLLPDSVVRQRGFVELLEEIDEEENLIEIDISRGLNR

A0A6J1FNF5 uncharacterized protein LOC1114467584.90e-6258.95Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLL--LLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN
        SRLN+ + ST LASI FL+LRFSPSFL+LL  LLIPS  FL  K    S+S++ S  NP LI                  S  G L    FD      + 
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLL--LLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALN

Query:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV
           +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDEL RNLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV+
Subjt:  PPLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVV

Query:  RQRGFVELLEEIDEEENLIEIDISRGLNR
        +Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  RQRGFVELLEEIDEEENLIEIDISRGLNR

A0A6J1J2I9 uncharacterized protein LOC1114806681.82e-6359.65Show/hide
Query:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL-IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALNP
        SRLN+ + ST LASI FL+LRFSPSFL+LLLL IPS  FL  K    S+S++ S  NP LI                  S  G L    FD      +  
Subjt:  SRLNLALASTFLASIFFLTLRFSPSFLTLLLL-IPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALNP

Query:  PLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVR
          +   +  EELSSD D+SSSNGG    GDF+SDLWMCLDELARNLP ++D SSEDDDSLIEI LLP S+AIRTDS   L  VRNLETCLPDLLPDSV++
Subjt:  PLIGVLRPSEELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVR

Query:  QRGFVELLEEIDEEENLIEIDISRGLNR
        Q GFVELLEEI+EE+NLIEIDISRG NR
Subjt:  QRGFVELLEEIDEEENLIEIDISRGLNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATCGTCTCGCCTCAATCTCGCCCTCGCTTCAACTTTTCTCGCCTCCATTTTCTTCCTCACTCTCCGATTCTCCCCTTCATTCCTCACGCTTCTTCTTCTCATCCCTTC
CACTCTCTTCCTCACCAAGAAATCCAAATCCGATTCCAATTCCAATCGATCTTCCGGCCACAATCCGCCTCTAATCGGAGTTCTCCGGCCGAGCGAAGAGCTTTCTTCCA
ACGGCGATGAGAGTAGTAGCAGTAATGGCGGCCGATTAGGAAGTGGAGACTTCGATTCCAATCGATCTTCCGCCCTGAATCCGCCTCTAATCGGAGTTCTCCGGCCGAGC
GAAGAGCTTTCTTCCGACGGCGACGAGAGTAGCAGCAATGGCGGCGGATTCGGAAGTGGAGACTTCGATTCCGATCTCTGGATGTGTCTGGACGAACTGGCGCGGAATCT
GCCGTGCGCGGAGGATTTGAGTTCGGAAGACGACGATAGCTTGATCGAAATCGCCCTTCTTCCGAACTCGAACGCGATTCGAACGGATTCGATGAACGGATTAGGAGGAG
TTCGAAATCTGGAGACGTGTTTGCCTGATTTGTTGCCGGATTCTGTTGTGAGACAGCGAGGGTTTGTGGAGCTGTTGGAAGAGATCGATGAGGAAGAGAACTTGATTGAG
ATCGATATTTCCAGAGGTTTAAATCGA
mRNA sequenceShow/hide mRNA sequence
TCATCGTCTCGCCTCAATCTCGCCCTCGCTTCAACTTTTCTCGCCTCCATTTTCTTCCTCACTCTCCGATTCTCCCCTTCATTCCTCACGCTTCTTCTTCTCATCCCTTC
CACTCTCTTCCTCACCAAGAAATCCAAATCCGATTCCAATTCCAATCGATCTTCCGGCCACAATCCGCCTCTAATCGGAGTTCTCCGGCCGAGCGAAGAGCTTTCTTCCA
ACGGCGATGAGAGTAGTAGCAGTAATGGCGGCCGATTAGGAAGTGGAGACTTCGATTCCAATCGATCTTCCGCCCTGAATCCGCCTCTAATCGGAGTTCTCCGGCCGAGC
GAAGAGCTTTCTTCCGACGGCGACGAGAGTAGCAGCAATGGCGGCGGATTCGGAAGTGGAGACTTCGATTCCGATCTCTGGATGTGTCTGGACGAACTGGCGCGGAATCT
GCCGTGCGCGGAGGATTTGAGTTCGGAAGACGACGATAGCTTGATCGAAATCGCCCTTCTTCCGAACTCGAACGCGATTCGAACGGATTCGATGAACGGATTAGGAGGAG
TTCGAAATCTGGAGACGTGTTTGCCTGATTTGTTGCCGGATTCTGTTGTGAGACAGCGAGGGTTTGTGGAGCTGTTGGAAGAGATCGATGAGGAAGAGAACTTGATTGAG
ATCGATATTTCCAGAGGTTTAAATCGA
Protein sequenceShow/hide protein sequence
SSSRLNLALASTFLASIFFLTLRFSPSFLTLLLLIPSTLFLTKKSKSDSNSNRSSGHNPPLIGVLRPSEELSSNGDESSSSNGGRLGSGDFDSNRSSALNPPLIGVLRPS
EELSSDGDESSSNGGGFGSGDFDSDLWMCLDELARNLPCAEDLSSEDDDSLIEIALLPNSNAIRTDSMNGLGGVRNLETCLPDLLPDSVVRQRGFVELLEEIDEEENLIE
IDISRGLNR