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MC11g1061 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1061
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribonuclease 1
Genome locationMC11:9066211..9066327
RNA-Seq ExpressionMC11g1061
SyntenyMC11g1061
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7031175.1 unnamed protein product [Microthlaspi erraticum]7.34e-0451.28Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W KHG CSE  LNQ +YF+ S+ + D ++LL  LT++GI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
CDP00339.1 unnamed protein product [Coffea canephora]7.22e-0453.85Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W+KHG CSE  L+Q  YFK ++ + D LDLL  L  AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
QHO42227.1 Ribonuclease [Arachis hypogaea]9.15e-0451.28Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        WDKHG CSE  LNQ +YF+ ++ +    +LL  LT AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
XP_027096342.1 extracellular ribonuclease LE-like [Coffea arabica]7.22e-0453.85Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W+KHG CSE  L+Q  YFK ++ + D LDLL  L  AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
XP_027098404.1 extracellular ribonuclease LE-like [Coffea arabica]1.99e-0456.41Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        WDKHG CSE  L+Q  YFK ++ + D LDLL  L  AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
TrEMBL top hitse value%identityAlignment
A0A068TWK7 Uncharacterized protein3.50e-0453.85Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W+KHG CSE  L+Q  YFK ++ + D LDLL  L  AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
A0A445D5I3 Ribonuclease T(2)4.43e-0451.28Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        WDKHG CSE  LNQ +YF+ ++ +    +LL  LT AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
A0A6D2IVD9 Ribonuclease T(2)3.56e-0451.28Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W KHG CSE  LNQ +YF+ S+ + D ++LL  LT++GI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
A0A6P6V396 extracellular ribonuclease LE-like3.50e-0453.85Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W+KHG CSE  L+Q  YFK ++ + D LDLL  L  AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
A0A6P6V5Z3 extracellular ribonuclease LE-like9.63e-0556.41Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        WDKHG CSE  L+Q  YFK ++ + D LDLL  L  AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26820.1 ribonuclease 33.8e-0443.59Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W+KHG C+E  L+Q +YF+  + +    +LL  LT+AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
AT2G02990.1 ribonuclease 11.3e-0446.15Show/hide
Query:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI
        W+KHG CSE  ++Q EYF+ ++ +    +LL  LT AGI
Subjt:  WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGACAAGCACGGGGTTTGCTCAGAGATTTATTTGAATCAAGAAGAGTACTTTAAAATGTCCATTATTATGATTGATGGTCTCGACCTTCTTGTTACCCTCACACATGC
TGGGATA
mRNA sequenceShow/hide mRNA sequence
TGGGACAAGCACGGGGTTTGCTCAGAGATTTATTTGAATCAAGAAGAGTACTTTAAAATGTCCATTATTATGATTGATGGTCTCGACCTTCTTGTTACCCTCACACATGC
TGGGATA
Protein sequenceShow/hide protein sequence
WDKHGVCSEIYLNQEEYFKMSIIMIDGLDLLVTLTHAGI