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MC11g1185 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1185
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationMC11:11012801..11013113
RNA-Seq ExpressionMC11g1185
SyntenyMC11g1185
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149381.1 uncharacterized protein LOC111017811 [Momordica charantia]7.32e-2870.24Show/hide
Query:  REDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC-SLES
        REDV VWI  SSGLFSVSSAWDVL P +  VPWFS L F GNI KHSFIAWL +RDRL T DRL  W SS+PV  CV C S ES
Subjt:  REDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC-SLES

XP_022157473.1 uncharacterized protein LOC111024165 [Momordica charantia]6.37e-3673.91Show/hide
Query:  ILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPFSWEVW
        I TSSGLFSVS+A DVL PVR PVPWFSL+ F GNI KHSFIAWL MRDRL T DRLC W  SV V  CV C+  ES D+LFFECPFSWEVW
Subjt:  ILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPFSWEVW

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]8.32e-2957.14Show/hide
Query:  VPVLAGREDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPF
        V  + G+ED  VW    SGLFSVSS W +L P R PV +F LL F GNI KHSFI+WL +RDRL T +RL  W + VP   CV C+ LESRDHLF +CP+
Subjt:  VPVLAGREDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPF

Query:  SWEVW
        S  VW
Subjt:  SWEVW

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]4.03e-2553.54Show/hide
Query:  EDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC--SLESRDHLFFECPFSWEVW
        ED  VW+  S   FS++SAW+ + P    V W  LL   GNI KHSF AWL +RDRL T DRL  W  S+P+  C+LC  + ESRDHLFF CPF WE+W
Subjt:  EDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC--SLESRDHLFFECPFSWEVW

XP_031745548.1 uncharacterized protein LOC116405965 [Cucumis sativus]1.97e-2652.53Show/hide
Query:  EDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC--SLESRDHLFFECPFSWEVW
        ED  VW+  S   FS++SAW+ + P  + V W  LL   GNI KHSF AWL +RDRL T DRL  W  S+P+  C+LC  + ESRDHLFF C F WE+W
Subjt:  EDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC--SLESRDHLFFECPFSWEVW

TrEMBL top hitse value%identityAlignment
A0A5A7TZS0 Reverse transcriptase domain-containing protein3.87e-2351.52Show/hide
Query:  EDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS--LESRDHLFFECPFSWEVW
         D  VW+    G FS++SAW+ + P    V W  LL   GNI KHSF AWL ++DRL T DRL  W SS+P+  C+LC   +ESRDHLFF CPF  +VW
Subjt:  EDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS--LESRDHLFFECPFSWEVW

A0A6J1D875 uncharacterized protein LOC1110178113.54e-2870.24Show/hide
Query:  REDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC-SLES
        REDV VWI  SSGLFSVSSAWDVL P +  VPWFS L F GNI KHSFIAWL +RDRL T DRL  W SS+PV  CV C S ES
Subjt:  REDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLC-SLES

A0A6J1DTG0 uncharacterized protein LOC1110241653.08e-3673.91Show/hide
Query:  ILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPFSWEVW
        I TSSGLFSVS+A DVL PVR PVPWFSL+ F GNI KHSFIAWL MRDRL T DRLC W  SV V  CV C+  ES D+LFFECPFSWEVW
Subjt:  ILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPFSWEVW

A0A6J1E271 uncharacterized protein LOC1110253244.03e-2957.14Show/hide
Query:  VPVLAGREDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPF
        V  + G+ED  VW    SGLFSVSS W +L P R PV +F LL F GNI KHSFI+WL +RDRL T +RL  W + VP   CV C+ LESRDHLF +CP+
Subjt:  VPVLAGREDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCS-LESRDHLFFECPF

Query:  SWEVW
        S  VW
Subjt:  SWEVW

A0A7J0F5J8 zf-RVT domain-containing protein4.93e-2249.02Show/hide
Query:  REDVPVWILTSSGLFSVSSAWDVLWPVRLP-VPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCH-WYSSVPVFLCVLCS--LESRDHLFFECPFSWE
          DV +WI +SSG FS++SAWD LW  R P V W  L+ F G++ + S IAWL +++RL T DR+        P+  C+LC+  LES DH+FF CPFS E
Subjt:  REDVPVWILTSSGLFSVSSAWDVLWPVRLP-VPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCH-WYSSVPVFLCVLCS--LESRDHLFFECPFSWE

Query:  VW
        VW
Subjt:  VW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.8e-1543.82Show/hide
Query:  SGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW
        S +FS +     L P    VPW+  + F  ++ KH+FI W+   +RL T DRL  W  S+P  +C+LC+   ESR HLFFECPF   VW
Subjt:  SGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.0e-1339.53Show/hide
Query:  FSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW
        FS +  WD + P    + W   + F G + KH+F  W++  DRL T  RL  W   +  F C LC++  ESRDHL F C F+ +VW
Subjt:  FSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-1445.78Show/hide
Query:  SSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW
        ++ W  L P+   V WF  + F G I KH+FIAW+ MR RL T DR+  W    P  LC+ C+   E+R HLFF+C F+ EVW
Subjt:  SSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.8e-1543.82Show/hide
Query:  SGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW
        S  FS    W  L P    VPW   + F  ++ KH+FI W+   +RL T DRL +W  S+P   C+LC+   +SR HLFFEC FS  VW
Subjt:  SGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEVW

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.9e-1444.71Show/hide
Query:  FSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEV
        FS ++ W  L PV   V W   + F G I KH+FI+W+ +R RL T D+L  W   VP  LC+LC+   E+R HLFF+C F+ E+
Subjt:  FSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSL--ESRDHLFFECPFSWEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCCAGTTTTGGCTGGGAGGGAAGATGTGCCCGTTTGGATTCTGACATCGTCAGGTCTTTTCTCGGTGTCAAGTGCGTGGGATGTGTTGTGGCCGGTTCGGCTTCCTGT
TCCTTGGTTCTCTCTACTTTGTTTCGATGGAAACATTCTGAAGCATTCTTTCATTGCTTGGTTGACGATGCGTGATCGACTTGTTACGTGGGATCGCTTATGCCATTGGT
ATTCTTCCGTTCCTGTTTTCCTATGTGTTTTGTGCTCACTTGAGTCCCGAGATCATCTGTTCTTTGAGTGCCCTTTTAGTTGGGAGGTCTGG
mRNA sequenceShow/hide mRNA sequence
GTTCCAGTTTTGGCTGGGAGGGAAGATGTGCCCGTTTGGATTCTGACATCGTCAGGTCTTTTCTCGGTGTCAAGTGCGTGGGATGTGTTGTGGCCGGTTCGGCTTCCTGT
TCCTTGGTTCTCTCTACTTTGTTTCGATGGAAACATTCTGAAGCATTCTTTCATTGCTTGGTTGACGATGCGTGATCGACTTGTTACGTGGGATCGCTTATGCCATTGGT
ATTCTTCCGTTCCTGTTTTCCTATGTGTTTTGTGCTCACTTGAGTCCCGAGATCATCTGTTCTTTGAGTGCCCTTTTAGTTGGGAGGTCTGG
Protein sequenceShow/hide protein sequence
VPVLAGREDVPVWILTSSGLFSVSSAWDVLWPVRLPVPWFSLLCFDGNILKHSFIAWLTMRDRLVTWDRLCHWYSSVPVFLCVLCSLESRDHLFFECPFSWEVW