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MC11g1207 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1207
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC11:11773868..11774358
RNA-Seq ExpressionMC11g1207
SyntenyMC11g1207
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]5.54e-1734.18Show/hide
Query:  LIWILLNSSSINAMD-VLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSS-----SNKVKA
        + W L +S+ +     V++ +L  S L+PS C LC  + E+   L F C  S+KCW  +L  F + WAF   + +N+  +L+G SLK        N  KA
Subjt:  LIWILLNSSSINAMD-VLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSS-----SNKVKA

Query:  NSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI
          S++W E N  IF+ K+    ++ D+A ++      L+  F+DY+  D+S+NW AFI
Subjt:  NSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]1.56e-2238.69Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-
        KT  P+R+N+  WIL     +N  D+++ K     LLPS C LC    E+ +HL F C  + KCW  +  +F + W F     +NV  LL GP   SSS 
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-

Query:  -----NKVKANSSELWLERNHIIFQKKICCSLDQFDMAL--KSLTRSLSNTFLDYNFVDISLNWEAFI
             N VKA  SELW ERN  +F++K     + F  A    SL  SL ++FL ++   I  NW AFI
Subjt:  -----NKVKANSSELWLERNHIIFQKKICCSLDQFDMAL--KSLTRSLSNTFLDYNFVDISLNWEAFI

XP_034223763.1 THO complex subunit 1 isoform X4 [Prunus dulcis]2.38e-0729.17Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS
        K   P ++   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SLK W+ +L      W      ++   +NL V    K   
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS

Query:  NK------VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA
                V A    +W+ERN  IFQ  I   +++    +K   SL  S+S  F DY++  I  +  A
Subjt:  NK------VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA

XP_034223765.1 THO complex subunit 1 isoform X5 [Prunus dulcis]2.36e-0729.17Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS
        K   P ++   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SLK W+ +L      W      ++   +NL V    K   
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS

Query:  NK------VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA
                V A    +W+ERN  IFQ  I   +++    +K   SL  S+S  F DY++  I  +  A
Subjt:  NK------VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]1.98e-2339.52Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-
        KT  P+R+NILIWI+L    +N  +VL+ K     L P+VC  C   SE   HL F C  S  CW  +L  F +     ND+K+NV  LL  P+   S+ 
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-

Query:  ----NKVKANSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI
            N VKA  ++LW ERN  IF  K     D+ + A +  +    LS+ F  Y+  D +LNWEAFI
Subjt:  ----NKVKANSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein6.16e-1331.52Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSSN
        ++  P+R+NILIWI++    I++ ++L+ K S   + PS+C LC   S+N  H+   C +S   W  +   F ++W F +    +V+ LL G +L  +  
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSSN

Query:  KV-----KANSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEA
         +     KA   E+W+ERN  IF  K     +    A  +     SL   F++Y+  DI LNW A
Subjt:  KV-----KANSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEA

A0A5A7V5N8 GPI-anchor transamidase isoform X12.68e-1734.18Show/hide
Query:  LIWILLNSSSINAMD-VLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSS-----SNKVKA
        + W L +S+ +     V++ +L  S L+PS C LC  + E+   L F C  S+KCW  +L  F + WAF   + +N+  +L+G SLK        N  KA
Subjt:  LIWILLNSSSINAMD-VLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSS-----SNKVKA

Query:  NSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI
          S++W E N  IF+ K+    ++ D+A ++      L+  F+DY+  D+S+NW AFI
Subjt:  NSSELWLERNHIIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI

A0A6J1DIE2 uncharacterized protein LOC1110207657.56e-2338.69Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-
        KT  P+R+N+  WIL     +N  D+++ K     LLPS C LC    E+ +HL F C  + KCW  +  +F + W F     +NV  LL GP   SSS 
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-

Query:  -----NKVKANSSELWLERNHIIFQKKICCSLDQFDMAL--KSLTRSLSNTFLDYNFVDISLNWEAFI
             N VKA  SELW ERN  +F++K     + F  A    SL  SL ++FL ++   I  NW AFI
Subjt:  -----NKVKANSSELWLERNHIIFQKKICCSLDQFDMAL--KSLTRSLSNTFLDYNFVDISLNWEAFI

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.27e-0728.31Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS
        K   P ++   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SL+ W+ +L    + W      ++   +NL +    K + 
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS

Query:  NK----VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA
              V A    +W+ERN  IFQ  I   +++    +K   SL  S+S  F DY++  I  +  A
Subjt:  NK----VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA

M5XV38 zf-RVT domain-containing protein1.08e-0728.31Show/hide
Query:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS
        K   P ++   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SL+ W+ +L    + W      ++   +NL +    K + 
Subjt:  KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSS

Query:  NK----VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA
              V A    +W+ERN  IFQ  I   +++    +K   SL  S+S  F DY++  I  +  A
Subjt:  NK----VKANSSELWLERNHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAACCAATTGTCCTAAAAGAATGAACATTCTGATCTGGATTCTTTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTCTCAGCTTTT
GCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGA
TTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCGTCTCTAAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGG
TTGGAACGTAACCATATAATCTTTCAAAAAAAGATTTGCTGCTCATTGGATCAGTTTGACATGGCTTTAAAGAGCCTCACACGTTCTCTTTCTAATACTTTTTTGGACTA
TAATTTTGTTGATATTTCCTTAAACTGGGAAGCATTTATT
mRNA sequenceShow/hide mRNA sequence
AAAACCAATTGTCCTAAAAGAATGAACATTCTGATCTGGATTCTTTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTCTCAGCTTTT
GCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGA
TTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCGTCTCTAAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGG
TTGGAACGTAACCATATAATCTTTCAAAAAAAGATTTGCTGCTCATTGGATCAGTTTGACATGGCTTTAAAGAGCCTCACACGTTCTCTTTCTAATACTTTTTTGGACTA
TAATTTTGTTGATATTTCCTTAAACTGGGAAGCATTTATT
Protein sequenceShow/hide protein sequence
KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSSNKVKANSSELW
LERNHIIFQKKICCSLDQFDMALKSLTRSLSNTFLDYNFVDISLNWEAFI