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MC11g1211 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1211
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC11:11892271..11892601
RNA-Seq ExpressionMC11g1211
SyntenyMC11g1211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059476.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]1.08e-1236.17Show/hide
Query:  EDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRSTFLNLS
        +D W  ++PLA ++ +I+ I  +K  ++A  W  +N  WDLG+RR +FDREI +++ L   L    ++   D++R  L+A   F+++STFL L+
Subjt:  EDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRSTFLNLS

KAA0065914.1 uncharacterized protein E6C27_scaffold538G00970 [Cucumis melo var. makuwa]8.60e-1433.02Show/hide
Query:  FSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRS
        F +  G KI FW+D W    PLA+ F N+FS+       +A+CW +   +W+L +RR + D ++D+   ++  L+    S   D+ +W  +   SFT ++
Subjt:  FSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRS

Query:  TFLNLS
        TFL+L+
Subjt:  TFLNLS

KAG2597223.1 hypothetical protein PVAP13_5KG192707, partial [Panicum virgatum]8.60e-1331.48Show/hide
Query:  VNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTS
          F++GDG+ I FWED W+   PL   F   +     K  +++ECW      W +  RR     E+  W  L+  ++  T+S  +D ++WVL+   ++T 
Subjt:  VNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTS

Query:  RSTFLNLS
        RS +  LS
Subjt:  RSTFLNLS

TYK01352.1 hypothetical protein E5676_scaffold29G00370 [Cucumis melo var. makuwa]1.10e-1834.55Show/hide
Query:  FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALC
        F +F  ++ GD K I FW+D   +++PL+Q F ++F +   K   +AECW   + +W+LG+RR + D E  +   ++  L+    +   D+++W L+A  
Subjt:  FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALC

Query:  SFTSRSTFLN
        +FT++STFLN
Subjt:  SFTSRSTFLN

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]1.13e-1738.89Show/hide
Query:  SMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLD
        S G G +I FW D W     LA+ F ++++I  +K  ++A+CW+    TWDLG RR LFDRE++ W  +V +L    L   +D + W L+
Subjt:  SMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLD

TrEMBL top hitse value%identityAlignment
A0A453EL43 Uncharacterized protein1.75e-1437.23Show/hide
Query:  FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRKIIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVL
        F   V FS+GDG  I FWED W+  RPLA  + +++ I +RK       +  +  ++  RR L      SW+ LV +L    LS G D+ RW L
Subjt:  FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRKIIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVL

A0A5A7VF37 Uncharacterized protein4.16e-1433.02Show/hide
Query:  FSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRS
        F +  G KI FW+D W    PLA+ F N+FS+       +A+CW +   +W+L +RR + D ++D+   ++  L+    S   D+ +W  +   SFT ++
Subjt:  FSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRS

Query:  TFLNLS
        TFL+L+
Subjt:  TFLNLS

A0A5D3BRF1 Uncharacterized protein5.31e-1934.55Show/hide
Query:  FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALC
        F +F  ++ GD K I FW+D   +++PL+Q F ++F +   K   +AECW   + +W+LG+RR + D E  +   ++  L+    +   D+++W L+A  
Subjt:  FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALC

Query:  SFTSRSTFLN
        +FT++STFLN
Subjt:  SFTSRSTFLN

A0A5D3BWG7 Transposon TX1 uncharacterized5.25e-1336.17Show/hide
Query:  EDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRSTFLNLS
        +D W  ++PLA ++ +I+ I  +K  ++A  W  +N  WDLG+RR +FDREI +++ L   L    ++   D++R  L+A   F+++STFL L+
Subjt:  EDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRSTFLNLS

A0A6J1D884 uncharacterized protein LOC1110178195.45e-1838.89Show/hide
Query:  SMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLD
        S G G +I FW D W     LA+ F ++++I  +K  ++A+CW+    TWDLG RR LFDRE++ W  +V +L    L   +D + W L+
Subjt:  SMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRK--IIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTGAGCTTTGTGAACTTCTCGATGGGAGATGGAAAGAAAATCCATTTTTGGGAAGACCCTTGGATTGATAGCAGACCTCTGGCTCAGGTTTTCCTCAATATTTTCTC
TATACTTCGTAGAAAAATAATTGCAGAATGTTGGAATTTGGCCAACATCACTTGGGATTTGGGGGTCAGAAGATGTCTTTTTGACAGGGAGATTGATAGCTGGGTGCTTT
TAGTAGGCAAGCTCAATTATGCCACCCTTAGCAGCGGTACAGATACAATCCGCTGGGTTTTAGATGCTTTGTGTTCCTTTACTTCGAGGTCCACTTTCCTTAATCTCTCT
mRNA sequenceShow/hide mRNA sequence
TTTTTGAGCTTTGTGAACTTCTCGATGGGAGATGGAAAGAAAATCCATTTTTGGGAAGACCCTTGGATTGATAGCAGACCTCTGGCTCAGGTTTTCCTCAATATTTTCTC
TATACTTCGTAGAAAAATAATTGCAGAATGTTGGAATTTGGCCAACATCACTTGGGATTTGGGGGTCAGAAGATGTCTTTTTGACAGGGAGATTGATAGCTGGGTGCTTT
TAGTAGGCAAGCTCAATTATGCCACCCTTAGCAGCGGTACAGATACAATCCGCTGGGTTTTAGATGCTTTGTGTTCCTTTACTTCGAGGTCCACTTTCCTTAATCTCTCT
Protein sequenceShow/hide protein sequence
FLSFVNFSMGDGKKIHFWEDPWIDSRPLAQVFLNIFSILRRKIIAECWNLANITWDLGVRRCLFDREIDSWVLLVGKLNYATLSSGTDTIRWVLDALCSFTSRSTFLNLS