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MC11g1222 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1222
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTy1-copia retrotransposon protein
Genome locationMC11:12252519..12252629
RNA-Seq ExpressionMC11g1222
SyntenyMC11g1222
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031694.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]4.39e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
KAA0044882.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]4.39e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
KAA0049792.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]7.54e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
KAA0067000.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]6.68e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
TYK04337.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]3.72e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
TrEMBL top hitse value%identityAlignment
A0A5A7SKK3 Ty1-copia retrotransposon protein2.13e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
A0A5A7TNG2 Ty1-copia retrotransposon protein2.13e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
A0A5A7U1X6 Ty1-copia retrotransposon protein3.65e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
A0A5A7VIG3 Ty1-copia retrotransposon protein3.23e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
A0A5D3BXT2 Ty1-copia retrotransposon protein1.80e-0867.57Show/hide
Query:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
        K+LP LSK +PLDGTNY+   QKL IFFEQL+VD+ L
Subjt:  KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGTATTGCCTTATCTCTCTAAATTTGATCCTCTTGATGGAACTAATTACAAAATGCTGATCCAAAAACTTTTCATCTTCTTTGAACAATTGAAGGTTGACCATGCTTT
G
mRNA sequenceShow/hide mRNA sequence
AAAGTATTGCCTTATCTCTCTAAATTTGATCCTCTTGATGGAACTAATTACAAAATGCTGATCCAAAAACTTTTCATCTTCTTTGAACAATTGAAGGTTGACCATGCTTT
G
Protein sequenceShow/hide protein sequence
KVLPYLSKFDPLDGTNYKMLIQKLFIFFEQLKVDHAL