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MC11g1224 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1224
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTy1-copia retrotransposon protein
Genome locationMC11:12326765..12326934
RNA-Seq ExpressionMC11g1224
SyntenyMC11g1224
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009789656.1 PREDICTED: uncharacterized protein LOC104237252 [Nicotiana sylvestris]4.63e-1251.67Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNKI RGH LN  TN LFDLF+N    ++   SLE++YG      KKYV+ KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
XP_009790186.1 PREDICTED: uncharacterized protein LOC104237693 [Nicotiana sylvestris]4.56e-1456.67Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNKI RGH LN  TNLLFDLF+N    +    SLE++YG      KKYVVRKW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
XP_016432970.1 PREDICTED: uncharacterized protein LOC107759520 [Nicotiana tabacum]2.45e-1150Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNK  RGH LN  TN LFDLF+N    ++   SLE++YG      KKYV+ KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
XP_019226930.1 PREDICTED: uncharacterized protein LOC109208298 [Nicotiana attenuata]3.04e-1151.67Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F KDNK  RGH LN  TN LFDLF+N    ++   SLE++YG      KKYVV KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
XP_033511997.1 uncharacterized protein LOC117276747 [Nicotiana tomentosiformis]2.33e-1251.67Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNK  RGH LN  TN LFDLF+N    ++   SLE++YG      KKYVV KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
TrEMBL top hitse value%identityAlignment
A0A1S3WZ30 uncharacterized protein LOC1077595201.18e-1150Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNK  RGH LN  TN LFDLF+N    ++   SLE++YG      KKYV+ KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
A0A1S4B7W4 uncharacterized protein LOC1078054382.17e-1148.33Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNK  RGH LN  TN LFDLF+N    ++   +LE++YG      KKY V KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
A0A1U7XJ31 uncharacterized protein LOC1042372522.24e-1251.67Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNKI RGH LN  TN LFDLF+N    ++   SLE++YG      KKYV+ KW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
A0A1U7XKP3 uncharacterized protein LOC1042376932.21e-1456.67Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        +F+KDNKI RGH LN  TNLLFDLF+N    +    SLE++YG      KKYVVRKW++F
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
A0A6I9SXP0 uncharacterized protein LOC1051600702.23e-1153.33Show/hide
Query:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
        ++D+DNK  RGH LN   N LFDLFVN    +    ++E RYGG     KKYVV KWLQF
Subjt:  EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGG-----KKYVVRKWLQF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATTTGACAAAGACAACAAAATTGCCAGGGGTCACTTCCTGAATCGCACGACTAATTTGCTCTTTGACCTTTTTGTCAATAAAGGTATGCGAAGACTATTTGGGGGTAG
TCTAGAAAGAAGGTATGGGGGCAAAAAATACGTTGTGAGAAAATGGTTGCAATTT
mRNA sequenceShow/hide mRNA sequence
GAATTTGACAAAGACAACAAAATTGCCAGGGGTCACTTCCTGAATCGCACGACTAATTTGCTCTTTGACCTTTTTGTCAATAAAGGTATGCGAAGACTATTTGGGGGTAG
TCTAGAAAGAAGGTATGGGGGCAAAAAATACGTTGTGAGAAAATGGTTGCAATTT
Protein sequenceShow/hide protein sequence
EFDKDNKIARGHFLNRTTNLLFDLFVNKGMRRLFGGSLERRYGGKKYVVRKWLQF